RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 E9PCH4 1651 aa10.95□□□□□ -0.66
LRRC28-203ENST00000447360 MYOM2P54296 1465 aa10.94□□□□□ -0.66
LRRC28-203ENST00000447360 ROCK1Q13464 1354 aa10.93□□□□□ -0.66
LRRC28-203ENST00000447360 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
LRRC28-203ENST00000447360 NPM3O75607 178 aaKnown RBP10.93□□□□□ -0.66
LRRC28-203ENST00000447360 SF3B2Q13435 895 aaKnown RBP10.93□□□□□ -0.66
LRRC28-203ENST00000447360 IQGAP3Q86VI3 1631 aa10.92□□□□□ -0.66
LRRC28-203ENST00000447360 DEFB132Q7Z7B7 95 aa10.92□□□□□ -0.66
LRRC28-203ENST00000447360 UNC5CLQ8IV45 518 aa10.92□□□□□ -0.66
LRRC28-203ENST00000447360 COL22A1Q8NFW1 1626 aaPredicted RBP10.91□□□□□ -0.66
LRRC28-203ENST00000447360 NALCNQ8IZF0 1738 aa10.91□□□□□ -0.66
LRRC28-203ENST00000447360 PRAG1Q86YV5 1406 aa10.91□□□□□ -0.66
LRRC28-203ENST00000447360 ROBO2Q9HCK4 1378 aa10.9□□□□□ -0.66
LRRC28-203ENST00000447360 ESCO1Q5FWF5 840 aa10.9□□□□□ -0.66
LRRC28-203ENST00000447360 RALGAPBQ86X10 1494 aa10.89□□□□□ -0.67
LRRC28-203ENST00000447360 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
LRRC28-203ENST00000447360 HFM1A2PYH4 1435 aa10.89□□□□□ -0.67
LRRC28-203ENST00000447360 LRPPRCP42704 1394 aaKnown RBP10.89□□□□□ -0.67
LRRC28-203ENST00000447360 PXDNQ92626 1479 aa10.88□□□□□ -0.67
LRRC28-203ENST00000447360 LRP5O75197 1615 aa10.88□□□□□ -0.67
LRRC28-203ENST00000447360 FOXO3O43524 673 aa10.88□□□□□ -0.67
LRRC28-203ENST00000447360 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
LRRC28-203ENST00000447360 SLIT2O94813 1529 aa10.88□□□□□ -0.67
LRRC28-203ENST00000447360 NEXMIFQ5QGS0 1516 aa10.88□□□□□ -0.67
LRRC28-203ENST00000447360 HRCP23327 699 aa10.87□□□□□ -0.67
LRRC28-203ENST00000447360 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
LRRC28-203ENST00000447360 VPS72Q15906 364 aa10.86□□□□□ -0.67
LRRC28-203ENST00000447360 BAG6P46379 1132 aa10.85□□□□□ -0.67
LRRC28-203ENST00000447360 XPCQ01831 940 aaPredicted RBP10.85□□□□□ -0.67
LRRC28-203ENST00000447360 KRT27Q7Z3Y8 459 aa10.85□□□□□ -0.67
LRRC28-203ENST00000447360 GLI3P10071 1580 aa10.85□□□□□ -0.67
LRRC28-203ENST00000447360 SPATA31A3Q5VYP0 1347 aa10.84□□□□□ -0.67
LRRC28-203ENST00000447360 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
LRRC28-203ENST00000447360 SPHKAPQ2M3C7 1700 aa10.84□□□□□ -0.67
LRRC28-203ENST00000447360 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.84□□□□□ -0.67
LRRC28-203ENST00000447360 PSDA5PKW4 1024 aaPredicted RBP10.83□□□□□ -0.68
LRRC28-203ENST00000447360 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
LRRC28-203ENST00000447360 MARF1Q9Y4F3 1742 aaKnown RBP10.81□□□□□ -0.68
LRRC28-203ENST00000447360 HAP1P54257 671 aaPredicted RBP10.8□□□□□ -0.68
LRRC28-203ENST00000447360 KRT28Q7Z3Y7 464 aa10.8□□□□□ -0.68
LRRC28-203ENST00000447360 CCDC9Q9Y3X0 531 aaKnown RBP10.8□□□□□ -0.68
LRRC28-203ENST00000447360 CCDC144AA2RUR9 1427 aa10.8□□□□□ -0.68
LRRC28-203ENST00000447360 NAIPQ13075 1403 aa10.8□□□□□ -0.68
LRRC28-203ENST00000447360 CLTCL1P53675 1640 aa10.8□□□□□ -0.68
LRRC28-203ENST00000447360 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
LRRC28-203ENST00000447360 ITGAEP38570 1179 aa10.79□□□□□ -0.68
LRRC28-203ENST00000447360 PSME1Q06323 249 aa10.79□□□□□ -0.68
LRRC28-203ENST00000447360 EN1Q05925 392 aaPredicted RBP10.78□□□□□ -0.68
LRRC28-203ENST00000447360 WAPLQ7Z5K2 1190 aa10.78□□□□□ -0.68
LRRC28-203ENST00000447360 USP32Q8NFA0 1604 aa10.77□□□□□ -0.68
LRRC28-203ENST00000447360 TECPR2O15040 1411 aa10.77□□□□□ -0.68
LRRC28-203ENST00000447360 ZBTB22O15209 634 aa10.77□□□□□ -0.69
LRRC28-203ENST00000447360 R3HDM1Q15032 1099 aaKnown RBP10.77□□□□□ -0.69
LRRC28-203ENST00000447360 ABCC11Q96J66 1382 aa10.77□□□□□ -0.69
LRRC28-203ENST00000447360 TNS3Q68CZ2 1445 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 A0A0G2JS52 829 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 YY1P25490 414 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 MYT1Q01538 1121 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
LRRC28-203ENST00000447360 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 BRWD3Q6RI45 1802 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 SBNO1A3KN83 1393 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 ARHGEF10O15013 1369 aa10.76□□□□□ -0.69
LRRC28-203ENST00000447360 DISP2A7MBM2 1401 aa10.75□□□□□ -0.69
LRRC28-203ENST00000447360 STK26Q9P289 416 aa10.75□□□□□ -0.69
LRRC28-203ENST00000447360 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
LRRC28-203ENST00000447360 SIRT1Q96EB6 747 aa10.74□□□□□ -0.69
LRRC28-203ENST00000447360 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
LRRC28-203ENST00000447360 KIF1BO60333 1816 aa10.74□□□□□ -0.69
LRRC28-203ENST00000447360 NWD2Q9ULI1 1742 aa10.73□□□□□ -0.69
LRRC28-203ENST00000447360 BTG4Q9NY30 223 aa10.73□□□□□ -0.69
LRRC28-203ENST00000447360 ADGRF5Q8IZF2 1346 aa10.73□□□□□ -0.69
LRRC28-203ENST00000447360 KIF1AQ12756 1690 aa10.73□□□□□ -0.69
LRRC28-203ENST00000447360 EZH2Q15910 746 aaKnown RBP10.72□□□□□ -0.69
LRRC28-203ENST00000447360 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
LRRC28-203ENST00000447360 CAMKK2Q96RR4 588 aa10.72□□□□□ -0.69
LRRC28-203ENST00000447360 PLEKHH1Q9ULM0 1364 aa10.72□□□□□ -0.69
LRRC28-203ENST00000447360 UTRNP46939 3433 aa10.72□□□□□ -0.69
LRRC28-203ENST00000447360 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
LRRC28-203ENST00000447360 PARD3Q8TEW0 1356 aa10.71□□□□□ -0.69
LRRC28-203ENST00000447360 NRXN1Q9ULB1 1477 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 RRBP1Q9P2E9 1410 aaKnown RBP10.7□□□□□ -0.7
LRRC28-203ENST00000447360 ANKRD30BQ9BXX2 1392 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 PLEKHG5O94827 1062 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 FAM182BQ5T319 152 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 FAM196AQ6ZSG2 479 aa10.7□□□□□ -0.7
LRRC28-203ENST00000447360 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
LRRC28-203ENST00000447360 YTHDC2Q9H6S0 1430 aaKnown RBP10.68□□□□□ -0.7
LRRC28-203ENST00000447360 PPLO60437 1756 aa10.68□□□□□ -0.7
LRRC28-203ENST00000447360 FMN2Q9NZ56 1722 aa10.68□□□□□ -0.7
LRRC28-203ENST00000447360 DCAF8L1A6NGE4 600 aa10.68□□□□□ -0.7
LRRC28-203ENST00000447360 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
LRRC28-203ENST00000447360 TRIM37O94972 964 aa10.67□□□□□ -0.7
LRRC28-203ENST00000447360 APBA3O96018 575 aa10.67□□□□□ -0.7
LRRC28-203ENST00000447360 RGL3Q3MIN7 710 aa10.67□□□□□ -0.7
LRRC28-203ENST00000447360 PIK3C2GO75747 1445 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms