RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 STK26Q9P289 416 aa23.43■■□□□ 1.34
SPTLC1P1-201ENST00000447199 YTHDC2Q9H6S0 1430 aaKnown RBP23.42■■□□□ 1.34
SPTLC1P1-201ENST00000447199 KNDC1Q76NI1 1749 aa23.42■■□□□ 1.34
SPTLC1P1-201ENST00000447199 PNPLA6Q8IY17 1366 aa23.42■■□□□ 1.34
SPTLC1P1-201ENST00000447199 WAPLQ7Z5K2 1190 aa23.42■■□□□ 1.34
SPTLC1P1-201ENST00000447199 PLEKHH1Q9ULM0 1364 aa23.41■■□□□ 1.34
SPTLC1P1-201ENST00000447199 SOS2Q07890 1332 aaPredicted RBP23.41■■□□□ 1.34
SPTLC1P1-201ENST00000447199 MEX3CQ5U5Q3 659 aaKnown RBP23.39■■□□□ 1.33
SPTLC1P1-201ENST00000447199 SIRT1Q96EB6 747 aa23.39■■□□□ 1.33
SPTLC1P1-201ENST00000447199 NUTM2BA6NNL0 878 aaPredicted RBP23.38■■□□□ 1.33
SPTLC1P1-201ENST00000447199 NUTM2EB1AL46 878 aaPredicted RBP23.38■■□□□ 1.33
SPTLC1P1-201ENST00000447199 CFAP70Q5T0N1 1121 aa23.38■■□□□ 1.33
SPTLC1P1-201ENST00000447199 NUTM2AQ8IVF1 878 aaPredicted RBP23.38■■□□□ 1.33
SPTLC1P1-201ENST00000447199 ZNF772Q68DY9 489 aaPredicted RBP23.36■■□□□ 1.33
SPTLC1P1-201ENST00000447199 DHX57Q6P158 1386 aaKnown RBP23.33■■□□□ 1.33
SPTLC1P1-201ENST00000447199 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.33
SPTLC1P1-201ENST00000447199 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
SPTLC1P1-201ENST00000447199 PXDNQ92626 1479 aa23.31■■□□□ 1.32
SPTLC1P1-201ENST00000447199 NPHP3Q7Z494 1330 aa23.31■■□□□ 1.32
SPTLC1P1-201ENST00000447199 AFF2P51816 1311 aa23.3■■□□□ 1.32
SPTLC1P1-201ENST00000447199 FMN2Q9NZ56 1722 aa23.29■■□□□ 1.32
SPTLC1P1-201ENST00000447199 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
SPTLC1P1-201ENST00000447199 COL22A1Q8NFW1 1626 aaPredicted RBP23.27■■□□□ 1.32
SPTLC1P1-201ENST00000447199 NUTM2FA1L443 756 aa23.27■■□□□ 1.32
SPTLC1P1-201ENST00000447199 FOXO3O43524 673 aa23.27■■□□□ 1.32
SPTLC1P1-201ENST00000447199 DCAF11Q8TEB1 546 aa23.26■■□□□ 1.31
SPTLC1P1-201ENST00000447199 STAC3Q96MF2 364 aa23.26■■□□□ 1.31
SPTLC1P1-201ENST00000447199 C8orf37Q96NL8 207 aa23.26■■□□□ 1.31
SPTLC1P1-201ENST00000447199 PRAM1Q96QH2 718 aa23.26■■□□□ 1.31
SPTLC1P1-201ENST00000447199 RXRBP28702 533 aa23.23■■□□□ 1.31
SPTLC1P1-201ENST00000447199 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
SPTLC1P1-201ENST00000447199 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
SPTLC1P1-201ENST00000447199 ADAMTS2O95450 1211 aa23.22■■□□□ 1.31
SPTLC1P1-201ENST00000447199 CDK12Q9NYV4 1490 aaPredicted RBP23.22■■□□□ 1.31
SPTLC1P1-201ENST00000447199 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
SPTLC1P1-201ENST00000447199 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
SPTLC1P1-201ENST00000447199 ADGRB2O60241 1585 aa23.2■■□□□ 1.3
SPTLC1P1-201ENST00000447199 TRAK1Q9UPV9 953 aa23.19■■□□□ 1.3
SPTLC1P1-201ENST00000447199 NGLY1Q96IV0 654 aa23.18■■□□□ 1.3
SPTLC1P1-201ENST00000447199 POGKQ9P215 609 aa23.18■■□□□ 1.3
SPTLC1P1-201ENST00000447199 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
SPTLC1P1-201ENST00000447199 FNBP4Q8N3X1 1017 aaPredicted RBP23.17■■□□□ 1.3
SPTLC1P1-201ENST00000447199 QTRT2Q9H974 415 aaKnown RBP23.17■■□□□ 1.3
SPTLC1P1-201ENST00000447199 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
SPTLC1P1-201ENST00000447199 ANKARQ7Z5J8 1434 aa23.16■■□□□ 1.3
SPTLC1P1-201ENST00000447199 USP32Q8NFA0 1604 aa23.15■■□□□ 1.3
SPTLC1P1-201ENST00000447199 RBM6P78332 1123 aaKnown RBP23.14■■□□□ 1.29
SPTLC1P1-201ENST00000447199 KRT28Q7Z3Y7 464 aa23.14■■□□□ 1.29
SPTLC1P1-201ENST00000447199 RGPD8O14715 1765 aaPredicted RBP23.13■■□□□ 1.29
SPTLC1P1-201ENST00000447199 RGS12O14924 1447 aa23.13■■□□□ 1.29
SPTLC1P1-201ENST00000447199 USP21Q9UK80 565 aa23.12■■□□□ 1.29
SPTLC1P1-201ENST00000447199 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
SPTLC1P1-201ENST00000447199 TNS3Q68CZ2 1445 aa23.1■■□□□ 1.29
SPTLC1P1-201ENST00000447199 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.29
SPTLC1P1-201ENST00000447199 SBNO1A3KN83 1393 aa23.1■■□□□ 1.29
SPTLC1P1-201ENST00000447199 BCL9LQ86UU0 1499 aa23.1■■□□□ 1.29
SPTLC1P1-201ENST00000447199 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
SPTLC1P1-201ENST00000447199 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
SPTLC1P1-201ENST00000447199 ATRNO75882 1429 aa23.09■■□□□ 1.29
SPTLC1P1-201ENST00000447199 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
SPTLC1P1-201ENST00000447199 PSME1Q06323 249 aa23.08■■□□□ 1.29
SPTLC1P1-201ENST00000447199 TRPC5Q9UL62 973 aaPredicted RBP23.08■■□□□ 1.29
SPTLC1P1-201ENST00000447199 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
SPTLC1P1-201ENST00000447199 ARHGEF28Q8N1W1 1705 aaKnown RBP23.07■■□□□ 1.28
SPTLC1P1-201ENST00000447199 EIF3AQ14152 1382 aaKnown RBP23.06■■□□□ 1.28
SPTLC1P1-201ENST00000447199 MARF1Q9Y4F3 1742 aaKnown RBP23.06■■□□□ 1.28
SPTLC1P1-201ENST00000447199 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
SPTLC1P1-201ENST00000447199 KIAA1210Q9ULL0 1709 aa23.05■■□□□ 1.28
SPTLC1P1-201ENST00000447199 SLIT2O94813 1529 aa23.04■■□□□ 1.28
SPTLC1P1-201ENST00000447199 ARHGEF10O15013 1369 aa23.02■■□□□ 1.28
SPTLC1P1-201ENST00000447199 ATP7BP35670 1465 aa23.01■■□□□ 1.27
SPTLC1P1-201ENST00000447199 NBPF1Q3BBV0 1214 aa23.01■■□□□ 1.27
SPTLC1P1-201ENST00000447199 TRPM3Q9HCF6 1732 aaPredicted RBP23.01■■□□□ 1.27
SPTLC1P1-201ENST00000447199 EP400Q96L91 3159 aa23.01■■□□□ 1.27
SPTLC1P1-201ENST00000447199 CABLES1Q8TDN4 633 aa23■■□□□ 1.27
SPTLC1P1-201ENST00000447199 UNC5CLQ8IV45 518 aa22.98■■□□□ 1.27
SPTLC1P1-201ENST00000447199 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.98■■□□□ 1.27
SPTLC1P1-201ENST00000447199 ABCA3Q99758 1704 aa22.97■■□□□ 1.27
SPTLC1P1-201ENST00000447199 GPRASP1Q5JY77 1395 aa22.97■■□□□ 1.27
SPTLC1P1-201ENST00000447199 LMOD2Q6P5Q4 547 aa22.96■■□□□ 1.27
SPTLC1P1-201ENST00000447199 NUDT16Q96DE0 195 aaKnown RBP22.96■■□□□ 1.27
SPTLC1P1-201ENST00000447199 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
SPTLC1P1-201ENST00000447199 ALS2Q96Q42 1657 aa22.96■■□□□ 1.27
SPTLC1P1-201ENST00000447199 L3MBTL2Q969R5 705 aa22.95■■□□□ 1.26
SPTLC1P1-201ENST00000447199 CDK19Q9BWU1 502 aa22.94■■□□□ 1.26
SPTLC1P1-201ENST00000447199 RALGAPBQ86X10 1494 aa22.93■■□□□ 1.26
SPTLC1P1-201ENST00000447199 NGDNQ8NEJ9 315 aaKnown RBP22.93■■□□□ 1.26
SPTLC1P1-201ENST00000447199 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
SPTLC1P1-201ENST00000447199 GLI3P10071 1580 aa22.93■■□□□ 1.26
SPTLC1P1-201ENST00000447199 HAP1P54257 671 aaPredicted RBP22.92■■□□□ 1.26
SPTLC1P1-201ENST00000447199 ATAD2Q6PL18 1390 aa22.91■■□□□ 1.26
SPTLC1P1-201ENST00000447199 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
SPTLC1P1-201ENST00000447199 POLR3AO14802 1390 aaPredicted RBP22.9■■□□□ 1.26
SPTLC1P1-201ENST00000447199 FAM83GA6ND36 823 aa22.9■■□□□ 1.26
SPTLC1P1-201ENST00000447199 PLEKHG5O94827 1062 aa22.9■■□□□ 1.26
SPTLC1P1-201ENST00000447199 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
SPTLC1P1-201ENST00000447199 NWD2Q9ULI1 1742 aa22.88■■□□□ 1.25
SPTLC1P1-201ENST00000447199 CENPJQ9HC77 1338 aaPredicted RBP22.88■■□□□ 1.25
SPTLC1P1-201ENST00000447199 PLCH1Q4KWH8 1693 aa22.88■■□□□ 1.25
SPTLC1P1-201ENST00000447199 VPS72Q15906 364 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms