RNA–Protein interactions for RNA: ENST00000446989.1

LINC01054-201, Transcript of long intergenic non-protein coding RNA 1054, humanhuman

TSL 3 BASIC

Gene LINC01054, Length 514 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01054-201ENST00000446989 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
LINC01054-201ENST00000446989 CADPS2Q86UW7 1296 aa13.72□□□□□ -0.21
LINC01054-201ENST00000446989 DLC1Q96QB1 1528 aa13.72□□□□□ -0.21
LINC01054-201ENST00000446989 TONSLQ96HA7 1378 aa13.71□□□□□ -0.21
LINC01054-201ENST00000446989 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
LINC01054-201ENST00000446989 FMN2Q9NZ56 1722 aa13.7□□□□□ -0.22
LINC01054-201ENST00000446989 HSPA1LP34931 641 aa13.7□□□□□ -0.22
LINC01054-201ENST00000446989 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
LINC01054-201ENST00000446989 TRAK1Q9UPV9 953 aa13.7□□□□□ -0.22
LINC01054-201ENST00000446989 MST1RQ04912 1400 aa13.7□□□□□ -0.22
LINC01054-201ENST00000446989 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
LINC01054-201ENST00000446989 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC01054-201ENST00000446989 FAM135BQ49AJ0 1406 aa13.69□□□□□ -0.22
LINC01054-201ENST00000446989 NHSL1Q5SYE7 1610 aa13.68□□□□□ -0.22
LINC01054-201ENST00000446989 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
LINC01054-201ENST00000446989 QRICH2Q9H0J4 1663 aa13.66□□□□□ -0.22
LINC01054-201ENST00000446989 COL16A1Q07092 1604 aaPredicted RBP13.66□□□□□ -0.22
LINC01054-201ENST00000446989 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
LINC01054-201ENST00000446989 POGKQ9P215 609 aa13.66□□□□□ -0.22
LINC01054-201ENST00000446989 C1orf167Q5SNV9 1468 aa13.66□□□□□ -0.22
LINC01054-201ENST00000446989 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
LINC01054-201ENST00000446989 AHDC1Q5TGY3 1603 aaPredicted RBP13.65□□□□□ -0.22
LINC01054-201ENST00000446989 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
LINC01054-201ENST00000446989 BRINP3Q76B58 766 aa13.64□□□□□ -0.23
LINC01054-201ENST00000446989 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
LINC01054-201ENST00000446989 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
LINC01054-201ENST00000446989 MINK1Q8N4C8 1332 aaPredicted RBP13.63□□□□□ -0.23
LINC01054-201ENST00000446989 USP32Q8NFA0 1604 aa13.62□□□□□ -0.23
LINC01054-201ENST00000446989 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
LINC01054-201ENST00000446989 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
LINC01054-201ENST00000446989 KIF1AQ12756 1690 aa13.62□□□□□ -0.23
LINC01054-201ENST00000446989 NBPF8Q3BBV2 869 aa13.61□□□□□ -0.23
LINC01054-201ENST00000446989 ITSN1Q15811 1721 aa13.61□□□□□ -0.23
LINC01054-201ENST00000446989 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
LINC01054-201ENST00000446989 MED1Q15648 1581 aaPredicted RBP13.6□□□□□ -0.23
LINC01054-201ENST00000446989 DDX17Q92841 729 aaKnown RBP13.6□□□□□ -0.23
LINC01054-201ENST00000446989 ORAI2Q96SN7 254 aa13.6□□□□□ -0.23
LINC01054-201ENST00000446989 SHPRHQ149N8 1683 aa13.59□□□□□ -0.23
LINC01054-201ENST00000446989 CLSPNQ9HAW4 1339 aa13.59□□□□□ -0.23
LINC01054-201ENST00000446989 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
LINC01054-201ENST00000446989 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
LINC01054-201ENST00000446989 TOPAZ1Q8N9V7 1692 aa13.56□□□□□ -0.24
LINC01054-201ENST00000446989 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
LINC01054-201ENST00000446989 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
LINC01054-201ENST00000446989 GPRASP1Q5JY77 1395 aa13.55□□□□□ -0.24
LINC01054-201ENST00000446989 ANKARQ7Z5J8 1434 aa13.55□□□□□ -0.24
LINC01054-201ENST00000446989 WASLO00401 505 aaPredicted RBP13.54□□□□□ -0.24
LINC01054-201ENST00000446989 CARD11Q9BXL7 1154 aa13.54□□□□□ -0.24
LINC01054-201ENST00000446989 JCADQ9P266 1359 aa13.54□□□□□ -0.24
LINC01054-201ENST00000446989 ATP7BP35670 1465 aa13.54□□□□□ -0.24
LINC01054-201ENST00000446989 XPCQ01831 940 aaPredicted RBP13.53□□□□□ -0.24
LINC01054-201ENST00000446989 DISP3Q9P2K9 1392 aa13.53□□□□□ -0.24
LINC01054-201ENST00000446989 PXDNQ92626 1479 aa13.53□□□□□ -0.24
LINC01054-201ENST00000446989 FOXO3O43524 673 aa13.52□□□□□ -0.25
LINC01054-201ENST00000446989 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
LINC01054-201ENST00000446989 PRR36Q9H6K5 1346 aa13.52□□□□□ -0.25
LINC01054-201ENST00000446989 PMFBP1Q8TBY8 1022 aa13.51□□□□□ -0.25
LINC01054-201ENST00000446989 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
LINC01054-201ENST00000446989 CDK19Q9BWU1 502 aa13.5□□□□□ -0.25
LINC01054-201ENST00000446989 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
LINC01054-201ENST00000446989 LRP6O75581 1613 aa13.5□□□□□ -0.25
LINC01054-201ENST00000446989 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
LINC01054-201ENST00000446989 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
LINC01054-201ENST00000446989 SOS2Q07890 1332 aaPredicted RBP13.49□□□□□ -0.25
LINC01054-201ENST00000446989 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
LINC01054-201ENST00000446989 LRRC59Q96AG4 307 aaKnown RBP13.49□□□□□ -0.25
LINC01054-201ENST00000446989 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
LINC01054-201ENST00000446989 NUDT16Q96DE0 195 aaKnown RBP13.47□□□□□ -0.25
LINC01054-201ENST00000446989 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
LINC01054-201ENST00000446989 ABCA3Q99758 1704 aa13.47□□□□□ -0.25
LINC01054-201ENST00000446989 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
LINC01054-201ENST00000446989 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
LINC01054-201ENST00000446989 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.25
LINC01054-201ENST00000446989 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.25
LINC01054-201ENST00000446989 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
LINC01054-201ENST00000446989 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.25
LINC01054-201ENST00000446989 ALS2Q96Q42 1657 aa13.46□□□□□ -0.26
LINC01054-201ENST00000446989 PPIP5K1Q6PFW1 1433 aa13.46□□□□□ -0.26
LINC01054-201ENST00000446989 EVC2Q86UK5 1308 aa13.45□□□□□ -0.26
LINC01054-201ENST00000446989 PSME1Q06323 249 aa13.45□□□□□ -0.26
LINC01054-201ENST00000446989 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
LINC01054-201ENST00000446989 TNS3Q68CZ2 1445 aa13.45□□□□□ -0.26
LINC01054-201ENST00000446989 USP47Q96K76 1375 aa13.45□□□□□ -0.26
LINC01054-201ENST00000446989 SBNO2Q9Y2G9 1366 aa13.45□□□□□ -0.26
LINC01054-201ENST00000446989 NGDNQ8NEJ9 315 aaKnown RBP13.44□□□□□ -0.26
LINC01054-201ENST00000446989 AKAP12Q02952 1782 aa13.44□□□□□ -0.26
LINC01054-201ENST00000446989 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
LINC01054-201ENST00000446989 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
LINC01054-201ENST00000446989 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
LINC01054-201ENST00000446989 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
LINC01054-201ENST00000446989 ST20-MTHFSA0A0A6YYL1 179 aa13.42□□□□□ -0.26
LINC01054-201ENST00000446989 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
LINC01054-201ENST00000446989 SBNO1A3KN83 1393 aa13.41□□□□□ -0.26
LINC01054-201ENST00000446989 ACEP12821 1306 aa13.4□□□□□ -0.26
LINC01054-201ENST00000446989 PHRF1Q9P1Y6 1649 aaKnown RBP13.4□□□□□ -0.26
LINC01054-201ENST00000446989 MON2Q7Z3U7 1717 aa13.4□□□□□ -0.26
LINC01054-201ENST00000446989 PAK3O75914 559 aaPredicted RBP13.4□□□□□ -0.26
LINC01054-201ENST00000446989 POLR3AO14802 1390 aaPredicted RBP13.4□□□□□ -0.26
LINC01054-201ENST00000446989 ADAMTS2O95450 1211 aa13.39□□□□□ -0.27
LINC01054-201ENST00000446989 ARHGEF10O15013 1369 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms