RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
PTPRN-208ENST00000446182 CCDC144AA2RUR9 1427 aa15.74■□□□□ 0.11
PTPRN-208ENST00000446182 TECPR2O15040 1411 aa15.74■□□□□ 0.11
PTPRN-208ENST00000446182 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
PTPRN-208ENST00000446182 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
PTPRN-208ENST00000446182 MYOM2P54296 1465 aa15.73■□□□□ 0.11
PTPRN-208ENST00000446182 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
PTPRN-208ENST00000446182 ESCO1Q5FWF5 840 aa15.73■□□□□ 0.11
PTPRN-208ENST00000446182 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
PTPRN-208ENST00000446182 USP21Q9UK80 565 aa15.73■□□□□ 0.11
PTPRN-208ENST00000446182 PXDNQ92626 1479 aa15.72■□□□□ 0.11
PTPRN-208ENST00000446182 TRPC5Q9UL62 973 aaPredicted RBP15.72■□□□□ 0.11
PTPRN-208ENST00000446182 LRPPRCP42704 1394 aaKnown RBP15.72■□□□□ 0.11
PTPRN-208ENST00000446182 ANKRD30BQ9BXX2 1392 aa15.72■□□□□ 0.11
PTPRN-208ENST00000446182 ATRNO75882 1429 aa15.71■□□□□ 0.11
PTPRN-208ENST00000446182 RGL3Q3MIN7 710 aa15.71■□□□□ 0.11
PTPRN-208ENST00000446182 WAPLQ7Z5K2 1190 aa15.71■□□□□ 0.11
PTPRN-208ENST00000446182 STK26Q9P289 416 aa15.71■□□□□ 0.11
PTPRN-208ENST00000446182 MPHOSPH9Q99550 1183 aa15.7■□□□□ 0.1
PTPRN-208ENST00000446182 ABCC11Q96J66 1382 aa15.7■□□□□ 0.1
PTPRN-208ENST00000446182 FOXO3O43524 673 aa15.69■□□□□ 0.1
PTPRN-208ENST00000446182 XPCQ01831 940 aaPredicted RBP15.69■□□□□ 0.1
PTPRN-208ENST00000446182 ATAD2Q6PL18 1390 aa15.69■□□□□ 0.1
PTPRN-208ENST00000446182 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
PTPRN-208ENST00000446182 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
PTPRN-208ENST00000446182 TMEM132EQ6IEE7 984 aa15.68■□□□□ 0.1
PTPRN-208ENST00000446182 IFT172Q9UG01 1749 aa15.68■□□□□ 0.1
PTPRN-208ENST00000446182 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
PTPRN-208ENST00000446182 BCL9LQ86UU0 1499 aa15.66■□□□□ 0.1
PTPRN-208ENST00000446182 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
PTPRN-208ENST00000446182 YTHDC2Q9H6S0 1430 aaKnown RBP15.65■□□□□ 0.1
PTPRN-208ENST00000446182 FMN2Q9NZ56 1722 aa15.63■□□□□ 0.09
PTPRN-208ENST00000446182 SPATA31A3Q5VYP0 1347 aa15.63■□□□□ 0.09
PTPRN-208ENST00000446182 SIRT1Q96EB6 747 aa15.62■□□□□ 0.09
PTPRN-208ENST00000446182 C14orf93Q9H972 538 aaKnown RBP15.62■□□□□ 0.09
PTPRN-208ENST00000446182 KIF1AQ12756 1690 aa15.61■□□□□ 0.09
PTPRN-208ENST00000446182 NRXN1Q9ULB1 1477 aa15.61■□□□□ 0.09
PTPRN-208ENST00000446182 MARF1Q9Y4F3 1742 aaKnown RBP15.61■□□□□ 0.09
PTPRN-208ENST00000446182 GJD4Q96KN9 370 aaPredicted RBP15.61■□□□□ 0.09
PTPRN-208ENST00000446182 EP400Q96L91 3159 aa15.61■□□□□ 0.09
PTPRN-208ENST00000446182 SLIT2O94813 1529 aa15.6■□□□□ 0.09
PTPRN-208ENST00000446182 KRT28Q7Z3Y7 464 aa15.6■□□□□ 0.09
PTPRN-208ENST00000446182 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
PTPRN-208ENST00000446182 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.58■□□□□ 0.08
PTPRN-208ENST00000446182 UNC5CLQ8IV45 518 aa15.58■□□□□ 0.08
PTPRN-208ENST00000446182 DHX57Q6P158 1386 aaKnown RBP15.58■□□□□ 0.08
PTPRN-208ENST00000446182 RALGAPBQ86X10 1494 aa15.58■□□□□ 0.08
PTPRN-208ENST00000446182 PHF8Q9UPP1 1060 aa15.57■□□□□ 0.08
PTPRN-208ENST00000446182 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
PTPRN-208ENST00000446182 TNS3Q68CZ2 1445 aa15.57■□□□□ 0.08
PTPRN-208ENST00000446182 GLI3P10071 1580 aa15.57■□□□□ 0.08
PTPRN-208ENST00000446182 USP32Q8NFA0 1604 aa15.57■□□□□ 0.08
PTPRN-208ENST00000446182 PRAM1Q96QH2 718 aa15.56■□□□□ 0.08
PTPRN-208ENST00000446182 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
PTPRN-208ENST00000446182 CCDC125Q86Z20 511 aa15.55■□□□□ 0.08
PTPRN-208ENST00000446182 PSME1Q06323 249 aa15.54■□□□□ 0.08
PTPRN-208ENST00000446182 SAFB2Q14151 953 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTPRN-208ENST00000446182 DLC1Q96QB1 1528 aa15.53■□□□□ 0.08
PTPRN-208ENST00000446182 CABLES1Q8TDN4 633 aa15.53■□□□□ 0.08
PTPRN-208ENST00000446182 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
PTPRN-208ENST00000446182 ANKARQ7Z5J8 1434 aa15.52■□□□□ 0.08
PTPRN-208ENST00000446182 HAP1P54257 671 aaPredicted RBP15.52■□□□□ 0.08
PTPRN-208ENST00000446182 RGPD8O14715 1765 aaPredicted RBP15.52■□□□□ 0.07
PTPRN-208ENST00000446182 ARHGEF10O15013 1369 aa15.51■□□□□ 0.07
PTPRN-208ENST00000446182 ADGRB1O14514 1584 aa15.51■□□□□ 0.07
PTPRN-208ENST00000446182 VPS72Q15906 364 aa15.51■□□□□ 0.07
PTPRN-208ENST00000446182 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
PTPRN-208ENST00000446182 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
PTPRN-208ENST00000446182 ADGRB2O60241 1585 aa15.5■□□□□ 0.07
PTPRN-208ENST00000446182 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
PTPRN-208ENST00000446182 PMFBP1Q8TBY8 1022 aa15.5■□□□□ 0.07
PTPRN-208ENST00000446182 POGKQ9P215 609 aa15.5■□□□□ 0.07
PTPRN-208ENST00000446182 LMOD2Q6P5Q4 547 aa15.49■□□□□ 0.07
PTPRN-208ENST00000446182 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
PTPRN-208ENST00000446182 ABCA3Q99758 1704 aa15.48■□□□□ 0.07
PTPRN-208ENST00000446182 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
PTPRN-208ENST00000446182 NWD2Q9ULI1 1742 aa15.48■□□□□ 0.07
PTPRN-208ENST00000446182 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
PTPRN-208ENST00000446182 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
PTPRN-208ENST00000446182 TRAK1Q9UPV9 953 aa15.47■□□□□ 0.07
PTPRN-208ENST00000446182 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.07
PTPRN-208ENST00000446182 BRWD3Q6RI45 1802 aa15.46■□□□□ 0.07
PTPRN-208ENST00000446182 DEFB132Q7Z7B7 95 aa15.46■□□□□ 0.07
PTPRN-208ENST00000446182 HIRIP3Q9BW71 556 aaPredicted RBP15.46■□□□□ 0.07
PTPRN-208ENST00000446182 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.07
PTPRN-208ENST00000446182 MINK1Q8N4C8 1332 aaPredicted RBP15.45■□□□□ 0.06
PTPRN-208ENST00000446182 EIF3AQ14152 1382 aaKnown RBP15.45■□□□□ 0.06
PTPRN-208ENST00000446182 TRPM3Q9HCF6 1732 aaPredicted RBP15.45■□□□□ 0.06
PTPRN-208ENST00000446182 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
PTPRN-208ENST00000446182 KRT27Q7Z3Y8 459 aa15.44■□□□□ 0.06
PTPRN-208ENST00000446182 GPRASP1Q5JY77 1395 aa15.44■□□□□ 0.06
PTPRN-208ENST00000446182 DCAF11Q8TEB1 546 aa15.43■□□□□ 0.06
PTPRN-208ENST00000446182 KDM2AQ9Y2K7 1162 aa15.43■□□□□ 0.06
PTPRN-208ENST00000446182 ALS2Q96Q42 1657 aa15.42■□□□□ 0.06
PTPRN-208ENST00000446182 WASLO00401 505 aaPredicted RBP15.42■□□□□ 0.06
PTPRN-208ENST00000446182 SF3B2Q13435 895 aaKnown RBP15.42■□□□□ 0.06
PTPRN-208ENST00000446182 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
PTPRN-208ENST00000446182 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
PTPRN-208ENST00000446182 FAM98CQ17RN3 349 aaKnown RBP15.4■□□□□ 0.06
PTPRN-208ENST00000446182 STAC3Q96MF2 364 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms