RNA–Protein interactions for RNA: ENST00000445658.6

ERBB2-203, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2 BASIC

Gene ERBB2, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-203ENST00000445658 ZFYVE9O95405 1425 aa16.46■□□□□ 0.22
ERBB2-203ENST00000445658 RRP1P56182 461 aaKnown RBP16.45■□□□□ 0.22
ERBB2-203ENST00000445658 KNSTRNQ9Y448 316 aa16.45■□□□□ 0.22
ERBB2-203ENST00000445658 CLTCQ00610 1675 aaKnown RBP16.45■□□□□ 0.22
ERBB2-203ENST00000445658 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
ERBB2-203ENST00000445658 ERVK-7P63135 1459 aa16.44■□□□□ 0.22
ERBB2-203ENST00000445658 ARHGEF28Q8N1W1 1705 aaKnown RBP16.44■□□□□ 0.22
ERBB2-203ENST00000445658 CDCA8Q53HL2 280 aa16.44■□□□□ 0.22
ERBB2-203ENST00000445658 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
ERBB2-203ENST00000445658 INSRP06213 1382 aa16.42■□□□□ 0.22
ERBB2-203ENST00000445658 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
ERBB2-203ENST00000445658 SPATA31D1Q6ZQQ2 1576 aa16.41■□□□□ 0.22
ERBB2-203ENST00000445658 SLC52A1Q9NWF4 448 aa16.4■□□□□ 0.22
ERBB2-203ENST00000445658 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
ERBB2-203ENST00000445658 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
ERBB2-203ENST00000445658 RGS3P49796 1198 aa16.38■□□□□ 0.21
ERBB2-203ENST00000445658 NLRP13Q86W25 1043 aa16.38■□□□□ 0.21
ERBB2-203ENST00000445658 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
ERBB2-203ENST00000445658 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
ERBB2-203ENST00000445658 USP32Q8NFA0 1604 aa16.36■□□□□ 0.21
ERBB2-203ENST00000445658 TCERG1O14776 1098 aaKnown RBP16.36■□□□□ 0.21
ERBB2-203ENST00000445658 WDR43Q15061 677 aaKnown RBP eCLIP16.36■□□□□ 0.211e-5■■■■□ 24.6
ERBB2-203ENST00000445658 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
ERBB2-203ENST00000445658 ARXQ96QS3 562 aa16.36■□□□□ 0.21
ERBB2-203ENST00000445658 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
ERBB2-203ENST00000445658 C20orf194Q5TEA3 1177 aa16.34■□□□□ 0.21
ERBB2-203ENST00000445658 IDI1Q13907 227 aa16.34■□□□□ 0.21
ERBB2-203ENST00000445658 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
ERBB2-203ENST00000445658 BACH2Q9BYV9 841 aa16.34■□□□□ 0.21
ERBB2-203ENST00000445658 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.21
ERBB2-203ENST00000445658 BLMP54132 1417 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-203ENST00000445658 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-203ENST00000445658 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-203ENST00000445658 ESF1Q9H501 851 aaKnown RBP16.32■□□□□ 0.2
ERBB2-203ENST00000445658 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
ERBB2-203ENST00000445658 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
ERBB2-203ENST00000445658 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
ERBB2-203ENST00000445658 PUS7Q96PZ0 661 aaKnown RBP16.29■□□□□ 0.2
ERBB2-203ENST00000445658 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
ERBB2-203ENST00000445658 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
ERBB2-203ENST00000445658 A2ML1A8K2U0 1454 aa16.27■□□□□ 0.2
ERBB2-203ENST00000445658 ADAMTS8Q9UP79 889 aa16.27■□□□□ 0.19
ERBB2-203ENST00000445658 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
ERBB2-203ENST00000445658 PTPRMP28827 1452 aa16.26■□□□□ 0.19
ERBB2-203ENST00000445658 PPM1GO15355 546 aaPredicted RBP16.26■□□□□ 0.19
ERBB2-203ENST00000445658 POGKQ9P215 609 aa16.25■□□□□ 0.19
ERBB2-203ENST00000445658 MINK1Q8N4C8 1332 aaPredicted RBP16.24■□□□□ 0.19
ERBB2-203ENST00000445658 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
ERBB2-203ENST00000445658 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
ERBB2-203ENST00000445658 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
ERBB2-203ENST00000445658 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
ERBB2-203ENST00000445658 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
ERBB2-203ENST00000445658 KNDC1Q76NI1 1749 aa16.22■□□□□ 0.19
ERBB2-203ENST00000445658 RRP7AQ9Y3A4 280 aaKnown RBP16.22■□□□□ 0.19
ERBB2-203ENST00000445658 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
ERBB2-203ENST00000445658 NUTM2FA1L443 756 aa16.21■□□□□ 0.19
ERBB2-203ENST00000445658 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
ERBB2-203ENST00000445658 CARD14Q9BXL6 1004 aa16.21■□□□□ 0.19
ERBB2-203ENST00000445658 MORC1Q86VD1 984 aa16.21■□□□□ 0.18
ERBB2-203ENST00000445658 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
ERBB2-203ENST00000445658 ANKRD26Q9UPS8 1709 aa16.2■□□□□ 0.18
ERBB2-203ENST00000445658 GSE1Q14687 1217 aa16.19■□□□□ 0.18
ERBB2-203ENST00000445658 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-203ENST00000445658 SHPRHQ149N8 1683 aa16.19■□□□□ 0.18
ERBB2-203ENST00000445658 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
ERBB2-203ENST00000445658 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
ERBB2-203ENST00000445658 NINLQ9Y2I6 1382 aa16.19■□□□□ 0.18
ERBB2-203ENST00000445658 ZMYM3Q14202 1370 aa16.18■□□□□ 0.18
ERBB2-203ENST00000445658 PDE3BQ13370 1112 aa16.18■□□□□ 0.18
ERBB2-203ENST00000445658 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
ERBB2-203ENST00000445658 EVC2Q86UK5 1308 aa16.18■□□□□ 0.18
ERBB2-203ENST00000445658 APAF1O14727 1248 aa16.17■□□□□ 0.18
ERBB2-203ENST00000445658 MS4A1P11836 297 aa16.16■□□□□ 0.18
ERBB2-203ENST00000445658 NSD3Q9BZ95 1437 aa16.16■□□□□ 0.18
ERBB2-203ENST00000445658 SPRYD3Q8NCJ5 442 aa16.16■□□□□ 0.18
ERBB2-203ENST00000445658 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
ERBB2-203ENST00000445658 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
ERBB2-203ENST00000445658 ANKRD36BQ8N2N9 1353 aa16.15■□□□□ 0.18
ERBB2-203ENST00000445658 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.17
ERBB2-203ENST00000445658 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
ERBB2-203ENST00000445658 NSD2O96028 1365 aa16.14■□□□□ 0.17
ERBB2-203ENST00000445658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
ERBB2-203ENST00000445658 SOX12O15370 315 aa16.13■□□□□ 0.17
ERBB2-203ENST00000445658 C3P01024 1663 aa16.13■□□□□ 0.17
ERBB2-203ENST00000445658 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
ERBB2-203ENST00000445658 GGNBP2Q9H3C7 697 aa16.13■□□□□ 0.17
ERBB2-203ENST00000445658 PRAM1Q96QH2 718 aa16.12■□□□□ 0.17
ERBB2-203ENST00000445658 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
ERBB2-203ENST00000445658 FER1L4A9Z1Z3 1794 aa16.12■□□□□ 0.17
ERBB2-203ENST00000445658 BCAR3O75815 825 aa16.11■□□□□ 0.17
ERBB2-203ENST00000445658 FBLN1P23142 703 aa16.11■□□□□ 0.17
ERBB2-203ENST00000445658 TNRQ92752 1358 aa16.1■□□□□ 0.17
ERBB2-203ENST00000445658 CPS1P31327 1500 aa16.1■□□□□ 0.17
ERBB2-203ENST00000445658 CD163L1Q9NR16 1453 aa16.1■□□□□ 0.17
ERBB2-203ENST00000445658 WAPLQ7Z5K2 1190 aa16.1■□□□□ 0.17
ERBB2-203ENST00000445658 MED14O60244 1454 aa16.1■□□□□ 0.17
ERBB2-203ENST00000445658 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
ERBB2-203ENST00000445658 NLRP1Q9C000 1473 aa16.09■□□□□ 0.17
ERBB2-203ENST00000445658 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
ERBB2-203ENST00000445658 TECPR2O15040 1411 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms