RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 J3QL48 77 aa10.03□□□□□ -0.8
LINC01004-201ENST00000445184 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
LINC01004-201ENST00000445184 MRGPRX2Q96LB1 330 aa10.02□□□□□ -0.81
LINC01004-201ENST00000445184 TRIM32Q13049 653 aa10.01□□□□□ -0.81
LINC01004-201ENST00000445184 MSS51Q4VC12 460 aa10.01□□□□□ -0.81
LINC01004-201ENST00000445184 BRICD5Q6PL45 260 aa10.01□□□□□ -0.81
LINC01004-201ENST00000445184 ZSCAN1Q8NBB4 408 aa10□□□□□ -0.81
LINC01004-201ENST00000445184 HPS1Q92902 700 aa10□□□□□ -0.81
LINC01004-201ENST00000445184 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
LINC01004-201ENST00000445184 FECHP22830 423 aa9.99□□□□□ -0.81
LINC01004-201ENST00000445184 REPIN1Q9BWE0 567 aaKnown RBP9.99□□□□□ -0.81
LINC01004-201ENST00000445184 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
LINC01004-201ENST00000445184 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
LINC01004-201ENST00000445184 GMPRP36959 345 aa9.97□□□□□ -0.81
LINC01004-201ENST00000445184 GCGRP47871 477 aa9.96□□□□□ -0.82
LINC01004-201ENST00000445184 HIC1Q14526 733 aa9.96□□□□□ -0.82
LINC01004-201ENST00000445184 IRF7Q92985 503 aa9.96□□□□□ -0.82
LINC01004-201ENST00000445184 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
LINC01004-201ENST00000445184 NPAS3Q8IXF0 933 aa9.95□□□□□ -0.82
LINC01004-201ENST00000445184 RNF19BQ6ZMZ0 732 aa9.94□□□□□ -0.82
LINC01004-201ENST00000445184 KCNV2Q8TDN2 545 aa9.94□□□□□ -0.82
LINC01004-201ENST00000445184 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
LINC01004-201ENST00000445184 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
LINC01004-201ENST00000445184 MMP16P51512 607 aa9.92□□□□□ -0.82
LINC01004-201ENST00000445184 Q3C1V9 767 aa9.91□□□□□ -0.82
LINC01004-201ENST00000445184 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
LINC01004-201ENST00000445184 WNT7BP56706 349 aa9.88□□□□□ -0.83
LINC01004-201ENST00000445184 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
LINC01004-201ENST00000445184 SUZ12Q15022 739 aaKnown RBP9.87□□□□□ -0.83
LINC01004-201ENST00000445184 H3BM21 787 aa9.86□□□□□ -0.83
LINC01004-201ENST00000445184 CCDC24Q8N4L8 307 aa9.86□□□□□ -0.83
LINC01004-201ENST00000445184 DXOO77932 396 aaKnown RBP9.85□□□□□ -0.83
LINC01004-201ENST00000445184 VEGFBP49765 207 aa9.85□□□□□ -0.83
LINC01004-201ENST00000445184 SKOR1P84550 965 aa9.85□□□□□ -0.83
LINC01004-201ENST00000445184 NLRP7Q8WX94 980 aa9.85□□□□□ -0.83
LINC01004-201ENST00000445184 GNPATO15228 680 aa9.84□□□□□ -0.83
LINC01004-201ENST00000445184 TRIM46Q7Z4K8 759 aa9.84□□□□□ -0.83
LINC01004-201ENST00000445184 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
LINC01004-201ENST00000445184 BMP1P13497 986 aa9.83□□□□□ -0.84
LINC01004-201ENST00000445184 SEMA3EO15041 775 aa9.82□□□□□ -0.84
LINC01004-201ENST00000445184 CAPN5O15484 640 aaPredicted RBP9.82□□□□□ -0.84
LINC01004-201ENST00000445184 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
LINC01004-201ENST00000445184 WASF2Q9Y6W5 498 aa9.79□□□□□ -0.84
LINC01004-201ENST00000445184 SIAH2O43255 324 aa9.77□□□□□ -0.85
LINC01004-201ENST00000445184 P3H3Q8IVL6 736 aa9.77□□□□□ -0.85
LINC01004-201ENST00000445184 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
LINC01004-201ENST00000445184 RBM26Q5T8P6 1007 aaKnown RBP9.76□□□□□ -0.85
LINC01004-201ENST00000445184 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
LINC01004-201ENST00000445184 KCNMA1Q12791 1236 aa9.74□□□□□ -0.85
LINC01004-201ENST00000445184 ZFP42Q96MM3 310 aa9.74□□□□□ -0.85
LINC01004-201ENST00000445184 KDM4AO75164 1064 aa9.73□□□□□ -0.85
LINC01004-201ENST00000445184 SMYD5Q6GMV2 418 aa9.73□□□□□ -0.85
LINC01004-201ENST00000445184 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
LINC01004-201ENST00000445184 GPR37O15354 613 aa9.72□□□□□ -0.85
LINC01004-201ENST00000445184 CD46P15529 392 aa9.72□□□□□ -0.85
LINC01004-201ENST00000445184 JUNDP17535 347 aa9.71□□□□□ -0.86
LINC01004-201ENST00000445184 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
LINC01004-201ENST00000445184 VSIG8P0DPA2 414 aa9.7□□□□□ -0.86
LINC01004-201ENST00000445184 USP46P62068 366 aa9.7□□□□□ -0.86
LINC01004-201ENST00000445184 TESPA1A2RU30 521 aaPredicted RBP9.68□□□□□ -0.86
LINC01004-201ENST00000445184 SCARF1Q14162 830 aa9.68□□□□□ -0.86
LINC01004-201ENST00000445184 NUDT12Q9BQG2 462 aa9.68□□□□□ -0.86
LINC01004-201ENST00000445184 PTCRAQ6ISU1 281 aaPredicted RBP9.67□□□□□ -0.86
LINC01004-201ENST00000445184 HLA-CQ95604 372 aa9.67□□□□□ -0.86
LINC01004-201ENST00000445184 MRPL14Q6P1L8 145 aaKnown RBP9.66□□□□□ -0.86
LINC01004-201ENST00000445184 GSK3AP49840 483 aa9.65□□□□□ -0.86
LINC01004-201ENST00000445184 SH3BP2P78314 561 aa9.65□□□□□ -0.86
LINC01004-201ENST00000445184 TMEM151AQ8N4L1 468 aa9.65□□□□□ -0.86
LINC01004-201ENST00000445184 HOXA2O43364 376 aa9.64□□□□□ -0.87
LINC01004-201ENST00000445184 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
LINC01004-201ENST00000445184 PURBQ96QR8 312 aaKnown RBP9.63□□□□□ -0.87
LINC01004-201ENST00000445184 GDF11O95390 407 aa9.62□□□□□ -0.87
LINC01004-201ENST00000445184 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
LINC01004-201ENST00000445184 SOBPA7XYQ1 873 aa9.61□□□□□ -0.87
LINC01004-201ENST00000445184 RETREG3Q86VR2 466 aa9.61□□□□□ -0.87
LINC01004-201ENST00000445184 GUCA2AQ02747 115 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 NNTQ13423 1086 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 MPNDQ8N594 471 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
LINC01004-201ENST00000445184 PLCB2Q00722 1185 aa9.59□□□□□ -0.87
LINC01004-201ENST00000445184 RASSF7Q02833 373 aa9.59□□□□□ -0.87
LINC01004-201ENST00000445184 RNF225M0QZC1 329 aaPredicted RBP9.58□□□□□ -0.88
LINC01004-201ENST00000445184 ADH1CP00326 375 aa9.58□□□□□ -0.88
LINC01004-201ENST00000445184 TIMP2P16035 220 aa9.58□□□□□ -0.88
LINC01004-201ENST00000445184 WDR4P57081 412 aaKnown RBP9.58□□□□□ -0.88
LINC01004-201ENST00000445184 CCNYL3P0C7X3 344 aa9.57□□□□□ -0.88
LINC01004-201ENST00000445184 VARSP26640 1264 aaKnown RBP9.57□□□□□ -0.88
LINC01004-201ENST00000445184 MAN1A2O60476 641 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 MS4A1P11836 297 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 UNC93B1Q9H1C4 597 aa9.56□□□□□ -0.88
LINC01004-201ENST00000445184 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
LINC01004-201ENST00000445184 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
LINC01004-201ENST00000445184 BAP1Q92560 729 aa9.55□□□□□ -0.88
LINC01004-201ENST00000445184 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
LINC01004-201ENST00000445184 PTPRNQ16849 979 aa9.53□□□□□ -0.88
LINC01004-201ENST00000445184 KLF16Q9BXK1 252 aaPredicted RBP9.53□□□□□ -0.88
LINC01004-201ENST00000445184 EVA1BQ9NVM1 165 aa9.53□□□□□ -0.88
LINC01004-201ENST00000445184 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
LINC01004-201ENST00000445184 ZNF511Q8NB15 262 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms