RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 DDX17Q92841 729 aaKnown RBP25.41■■□□□ 1.66
PDCD4-203ENST00000444997 SIRT1Q96EB6 747 aa25.41■■□□□ 1.66
PDCD4-203ENST00000444997 ORAI2Q96SN7 254 aa25.41■■□□□ 1.66
PDCD4-203ENST00000444997 KDM2AQ9Y2K7 1162 aa25.41■■□□□ 1.66
PDCD4-203ENST00000444997 NUTM2BA6NNL0 878 aaPredicted RBP25.38■■□□□ 1.65
PDCD4-203ENST00000444997 NUTM2EB1AL46 878 aaPredicted RBP25.38■■□□□ 1.65
PDCD4-203ENST00000444997 ESCO1Q5FWF5 840 aa25.38■■□□□ 1.65
PDCD4-203ENST00000444997 NUTM2AQ8IVF1 878 aaPredicted RBP25.38■■□□□ 1.65
PDCD4-203ENST00000444997 LAMC1P11047 1609 aa25.37■■□□□ 1.65
PDCD4-203ENST00000444997 NHSL1Q5SYE7 1610 aa25.37■■□□□ 1.65
PDCD4-203ENST00000444997 SHPRHQ149N8 1683 aa25.37■■□□□ 1.65
PDCD4-203ENST00000444997 CDC42BPGQ6DT37 1551 aa25.37■■□□□ 1.65
PDCD4-203ENST00000444997 PLEKHH1Q9ULM0 1364 aa25.36■■□□□ 1.65
PDCD4-203ENST00000444997 KNDC1Q76NI1 1749 aa25.35■■□□□ 1.65
PDCD4-203ENST00000444997 POTEAQ6S8J7 498 aa25.35■■□□□ 1.65
PDCD4-203ENST00000444997 LRP6O75581 1613 aa25.34■■□□□ 1.65
PDCD4-203ENST00000444997 NUTM2FA1L443 756 aa25.32■■□□□ 1.64
PDCD4-203ENST00000444997 POGKQ9P215 609 aa25.32■■□□□ 1.64
PDCD4-203ENST00000444997 SOS2Q07890 1332 aaPredicted RBP25.32■■□□□ 1.64
PDCD4-203ENST00000444997 NPHP3Q7Z494 1330 aa25.32■■□□□ 1.64
PDCD4-203ENST00000444997 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
PDCD4-203ENST00000444997 PRAM1Q96QH2 718 aa25.31■■□□□ 1.64
PDCD4-203ENST00000444997 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
PDCD4-203ENST00000444997 SAFB2Q14151 953 aaKnown RBP eCLIP25.29■■□□□ 1.64
PDCD4-203ENST00000444997 FOXO3O43524 673 aa25.27■■□□□ 1.64
PDCD4-203ENST00000444997 TRAK1Q9UPV9 953 aa25.27■■□□□ 1.64
PDCD4-203ENST00000444997 DLC1Q96QB1 1528 aa25.25■■□□□ 1.63
PDCD4-203ENST00000444997 ADGRB1O14514 1584 aa25.22■■□□□ 1.63
PDCD4-203ENST00000444997 XPCQ01831 940 aaPredicted RBP25.21■■□□□ 1.63
PDCD4-203ENST00000444997 C8orf37Q96NL8 207 aa25.21■■□□□ 1.63
PDCD4-203ENST00000444997 AFF2P51816 1311 aa25.2■■□□□ 1.62
PDCD4-203ENST00000444997 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
PDCD4-203ENST00000444997 ADAMTS2O95450 1211 aa25.19■■□□□ 1.62
PDCD4-203ENST00000444997 PHF8Q9UPP1 1060 aa25.18■■□□□ 1.62
PDCD4-203ENST00000444997 PXDNQ92626 1479 aa25.17■■□□□ 1.62
PDCD4-203ENST00000444997 NGLY1Q96IV0 654 aa25.17■■□□□ 1.62
PDCD4-203ENST00000444997 MINK1Q8N4C8 1332 aaPredicted RBP25.16■■□□□ 1.62
PDCD4-203ENST00000444997 RXRBP28702 533 aa25.16■■□□□ 1.62
PDCD4-203ENST00000444997 HIRIP3Q9BW71 556 aaPredicted RBP25.16■■□□□ 1.62
PDCD4-203ENST00000444997 PSME1Q06323 249 aa25.15■■□□□ 1.62
PDCD4-203ENST00000444997 KRT28Q7Z3Y7 464 aa25.15■■□□□ 1.62
PDCD4-203ENST00000444997 KIF1AQ12756 1690 aa25.14■■□□□ 1.62
PDCD4-203ENST00000444997 EIF3AQ14152 1382 aaKnown RBP25.14■■□□□ 1.61
PDCD4-203ENST00000444997 ANKARQ7Z5J8 1434 aa25.13■■□□□ 1.61
PDCD4-203ENST00000444997 SPATA31A3Q5VYP0 1347 aa25.11■■□□□ 1.61
PDCD4-203ENST00000444997 WASLO00401 505 aaPredicted RBP25.1■■□□□ 1.61
PDCD4-203ENST00000444997 QTRT2Q9H974 415 aaKnown RBP25.1■■□□□ 1.61
PDCD4-203ENST00000444997 ADGRB2O60241 1585 aa25.1■■□□□ 1.61
PDCD4-203ENST00000444997 COL22A1Q8NFW1 1626 aaPredicted RBP25.09■■□□□ 1.61
PDCD4-203ENST00000444997 PMFBP1Q8TBY8 1022 aa25.08■■□□□ 1.61
PDCD4-203ENST00000444997 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
PDCD4-203ENST00000444997 SIN3AQ96ST3 1273 aa25.07■■□□□ 1.6
PDCD4-203ENST00000444997 USP21Q9UK80 565 aa25.07■■□□□ 1.6
PDCD4-203ENST00000444997 L3MBTL2Q969R5 705 aa25.06■■□□□ 1.6
PDCD4-203ENST00000444997 HAP1P54257 671 aaPredicted RBP25.05■■□□□ 1.6
PDCD4-203ENST00000444997 RBM6P78332 1123 aaKnown RBP25.05■■□□□ 1.6
PDCD4-203ENST00000444997 NBPF1Q3BBV0 1214 aa25.05■■□□□ 1.6
PDCD4-203ENST00000444997 KIAA1210Q9ULL0 1709 aa25.04■■□□□ 1.6
PDCD4-203ENST00000444997 LMOD2Q6P5Q4 547 aa25.04■■□□□ 1.6
PDCD4-203ENST00000444997 FNBP4Q8N3X1 1017 aaPredicted RBP25.04■■□□□ 1.6
PDCD4-203ENST00000444997 SBNO1A3KN83 1393 aa25.04■■□□□ 1.6
PDCD4-203ENST00000444997 TNS3Q68CZ2 1445 aa25.03■■□□□ 1.6
PDCD4-203ENST00000444997 TULP4Q9NRJ4 1543 aa25.03■■□□□ 1.6
PDCD4-203ENST00000444997 GPRASP1Q5JY77 1395 aa25.03■■□□□ 1.6
PDCD4-203ENST00000444997 RGPD8O14715 1765 aaPredicted RBP25.03■■□□□ 1.6
PDCD4-203ENST00000444997 TRPC5Q9UL62 973 aaPredicted RBP25.02■■□□□ 1.6
PDCD4-203ENST00000444997 CDK12Q9NYV4 1490 aaPredicted RBP25.02■■□□□ 1.6
PDCD4-203ENST00000444997 TRIM26Q12899 539 aaPredicted RBP25.01■■□□□ 1.59
PDCD4-203ENST00000444997 NGDNQ8NEJ9 315 aaKnown RBP25.01■■□□□ 1.59
PDCD4-203ENST00000444997 PRR36Q9H6K5 1346 aa25.01■■□□□ 1.59
PDCD4-203ENST00000444997 ARHGEF10O15013 1369 aa25.01■■□□□ 1.59
PDCD4-203ENST00000444997 ARHGEF28Q8N1W1 1705 aaKnown RBP25■■□□□ 1.59
PDCD4-203ENST00000444997 USP32Q8NFA0 1604 aa25■■□□□ 1.59
PDCD4-203ENST00000444997 NUDT16Q96DE0 195 aaKnown RBP24.99■■□□□ 1.59
PDCD4-203ENST00000444997 CDK19Q9BWU1 502 aa24.99■■□□□ 1.59
PDCD4-203ENST00000444997 PLEKHG5O94827 1062 aa24.97■■□□□ 1.59
PDCD4-203ENST00000444997 CENPJQ9HC77 1338 aaPredicted RBP24.95■■□□□ 1.58
PDCD4-203ENST00000444997 CABLES1Q8TDN4 633 aa24.95■■□□□ 1.58
PDCD4-203ENST00000444997 PAK3O75914 559 aaPredicted RBP24.93■■□□□ 1.58
PDCD4-203ENST00000444997 CCDC61Q9Y6R9 512 aa24.92■■□□□ 1.58
PDCD4-203ENST00000444997 ATP7BP35670 1465 aa24.91■■□□□ 1.58
PDCD4-203ENST00000444997 ATRNO75882 1429 aa24.91■■□□□ 1.58
PDCD4-203ENST00000444997 BCL9LQ86UU0 1499 aa24.9■■□□□ 1.58
PDCD4-203ENST00000444997 RGS12O14924 1447 aa24.9■■□□□ 1.58
PDCD4-203ENST00000444997 SRPK2P78362 688 aaKnown RBP24.9■■□□□ 1.58
PDCD4-203ENST00000444997 UNC5CLQ8IV45 518 aa24.9■■□□□ 1.58
PDCD4-203ENST00000444997 MARF1Q9Y4F3 1742 aaKnown RBP24.89■■□□□ 1.58
PDCD4-203ENST00000444997 ROCK2O75116 1388 aaKnown RBP24.89■■□□□ 1.57
PDCD4-203ENST00000444997 UPF1Q92900 1129 aaKnown RBP eCLIP24.88■■□□□ 1.57
PDCD4-203ENST00000444997 GJD4Q96KN9 370 aaPredicted RBP24.87■■□□□ 1.57
PDCD4-203ENST00000444997 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
PDCD4-203ENST00000444997 SLIT2O94813 1529 aa24.86■■□□□ 1.57
PDCD4-203ENST00000444997 PLEKHG3A1L390 1219 aa24.85■■□□□ 1.57
PDCD4-203ENST00000444997 ACEP12821 1306 aa24.85■■□□□ 1.57
PDCD4-203ENST00000444997 TONSLQ96HA7 1378 aa24.84■■□□□ 1.57
PDCD4-203ENST00000444997 NBPF8Q3BBV2 869 aa24.84■■□□□ 1.57
PDCD4-203ENST00000444997 TRPM3Q9HCF6 1732 aaPredicted RBP24.83■■□□□ 1.57
PDCD4-203ENST00000444997 CABP2Q9NPB3 220 aa24.83■■□□□ 1.57
PDCD4-203ENST00000444997 TRPM1Q7Z4N2 1603 aa24.83■■□□□ 1.56
PDCD4-203ENST00000444997 POLR3AO14802 1390 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms