RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 NBPF8Q3BBV2 869 aa20■□□□□ 0.79
SSBP3-208ENST00000444533 CARD11Q9BXL7 1154 aa20■□□□□ 0.79
SSBP3-208ENST00000444533 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
SSBP3-208ENST00000444533 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
SSBP3-208ENST00000444533 SLAIN2Q9P270 581 aa19.97■□□□□ 0.79
SSBP3-208ENST00000444533 RALGAPBQ86X10 1494 aa19.97■□□□□ 0.79
SSBP3-208ENST00000444533 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
SSBP3-208ENST00000444533 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
SSBP3-208ENST00000444533 CENPJQ9HC77 1338 aaPredicted RBP19.94■□□□□ 0.78
SSBP3-208ENST00000444533 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
SSBP3-208ENST00000444533 GPRASP1Q5JY77 1395 aa19.93■□□□□ 0.78
SSBP3-208ENST00000444533 MINK1Q8N4C8 1332 aaPredicted RBP19.92■□□□□ 0.78
SSBP3-208ENST00000444533 ARHGEF28Q8N1W1 1705 aaKnown RBP19.9■□□□□ 0.78
SSBP3-208ENST00000444533 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
SSBP3-208ENST00000444533 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
SSBP3-208ENST00000444533 SLC24A1O60721 1099 aa19.88■□□□□ 0.77
SSBP3-208ENST00000444533 ILDR1Q86SU0 546 aaPredicted RBP19.88■□□□□ 0.77
SSBP3-208ENST00000444533 MST1RQ04912 1400 aa19.86■□□□□ 0.77
SSBP3-208ENST00000444533 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
SSBP3-208ENST00000444533 NUTM2FA1L443 756 aa19.85■□□□□ 0.77
SSBP3-208ENST00000444533 ESCO1Q5FWF5 840 aa19.85■□□□□ 0.77
SSBP3-208ENST00000444533 ADGRB2O60241 1585 aa19.84■□□□□ 0.77
SSBP3-208ENST00000444533 C1orf167Q5SNV9 1468 aa19.84■□□□□ 0.77
SSBP3-208ENST00000444533 EVC2Q86UK5 1308 aa19.83■□□□□ 0.77
SSBP3-208ENST00000444533 SRPK2P78362 688 aaKnown RBP19.83■□□□□ 0.77
SSBP3-208ENST00000444533 ROBO1Q9Y6N7 1651 aa19.82■□□□□ 0.76
SSBP3-208ENST00000444533 BRINP3Q76B58 766 aa19.82■□□□□ 0.76
SSBP3-208ENST00000444533 QRICH2Q9H0J4 1663 aa19.81■□□□□ 0.76
SSBP3-208ENST00000444533 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
SSBP3-208ENST00000444533 ANKARQ7Z5J8 1434 aa19.81■□□□□ 0.76
SSBP3-208ENST00000444533 USP47Q96K76 1375 aa19.81■□□□□ 0.76
SSBP3-208ENST00000444533 FMN2Q9NZ56 1722 aa19.79■□□□□ 0.76
SSBP3-208ENST00000444533 ST20-MTHFSA0A0A6YYL1 179 aa19.78■□□□□ 0.76
SSBP3-208ENST00000444533 HSPA1LP34931 641 aa19.78■□□□□ 0.76
SSBP3-208ENST00000444533 ORAI2Q96SN7 254 aa19.78■□□□□ 0.76
SSBP3-208ENST00000444533 SBNO2Q9Y2G9 1366 aa19.78■□□□□ 0.76
SSBP3-208ENST00000444533 TULP4Q9NRJ4 1543 aa19.77■□□□□ 0.76
SSBP3-208ENST00000444533 EIF4G2P78344 907 aaKnown RBP eCLIP19.77■□□□□ 0.76
SSBP3-208ENST00000444533 NPHP3Q7Z494 1330 aa19.76■□□□□ 0.75
SSBP3-208ENST00000444533 NUDT16Q96DE0 195 aaKnown RBP19.76■□□□□ 0.75
SSBP3-208ENST00000444533 PHF8Q9UPP1 1060 aa19.76■□□□□ 0.75
SSBP3-208ENST00000444533 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
SSBP3-208ENST00000444533 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
SSBP3-208ENST00000444533 TMF1P82094 1093 aa19.74■□□□□ 0.75
SSBP3-208ENST00000444533 CABP2Q9NPB3 220 aa19.74■□□□□ 0.75
SSBP3-208ENST00000444533 KIF1AQ12756 1690 aa19.73■□□□□ 0.75
SSBP3-208ENST00000444533 FOXO3O43524 673 aa19.73■□□□□ 0.75
SSBP3-208ENST00000444533 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
SSBP3-208ENST00000444533 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
SSBP3-208ENST00000444533 PHLPP1O60346 1717 aa19.72■□□□□ 0.75
SSBP3-208ENST00000444533 PSME1Q06323 249 aa19.72■□□□□ 0.75
SSBP3-208ENST00000444533 ATAD2Q6PL18 1390 aa19.71■□□□□ 0.75
SSBP3-208ENST00000444533 PMFBP1Q8TBY8 1022 aa19.71■□□□□ 0.75
SSBP3-208ENST00000444533 LRRC59Q96AG4 307 aaKnown RBP19.71■□□□□ 0.75
SSBP3-208ENST00000444533 AHDC1Q5TGY3 1603 aaPredicted RBP19.71■□□□□ 0.75
SSBP3-208ENST00000444533 ITSN1Q15811 1721 aa19.71■□□□□ 0.75
SSBP3-208ENST00000444533 PRR36Q9H6K5 1346 aa19.69■□□□□ 0.74
SSBP3-208ENST00000444533 ATP7BP35670 1465 aa19.68■□□□□ 0.74
SSBP3-208ENST00000444533 PUS7Q96PZ0 661 aaKnown RBP19.68■□□□□ 0.74
SSBP3-208ENST00000444533 NHSL1Q5SYE7 1610 aa19.67■□□□□ 0.74
SSBP3-208ENST00000444533 KRT28Q7Z3Y7 464 aa19.67■□□□□ 0.74
SSBP3-208ENST00000444533 DDX17Q92841 729 aaKnown RBP19.67■□□□□ 0.74
SSBP3-208ENST00000444533 TESK2Q96S53 571 aa19.67■□□□□ 0.74
SSBP3-208ENST00000444533 RGPD8O14715 1765 aaPredicted RBP19.67■□□□□ 0.74
SSBP3-208ENST00000444533 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
SSBP3-208ENST00000444533 USP32Q8NFA0 1604 aa19.66■□□□□ 0.74
SSBP3-208ENST00000444533 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
SSBP3-208ENST00000444533 JCADQ9P266 1359 aa19.66■□□□□ 0.74
SSBP3-208ENST00000444533 PLEKHG3A1L390 1219 aa19.65■□□□□ 0.74
SSBP3-208ENST00000444533 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
SSBP3-208ENST00000444533 TMC1Q8TDI8 760 aa19.65■□□□□ 0.74
SSBP3-208ENST00000444533 SOS2Q07890 1332 aaPredicted RBP19.65■□□□□ 0.74
SSBP3-208ENST00000444533 CABP1Q9NZU7 370 aa19.64■□□□□ 0.73
SSBP3-208ENST00000444533 ACEP12821 1306 aa19.63■□□□□ 0.73
SSBP3-208ENST00000444533 COL16A1Q07092 1604 aaPredicted RBP19.62■□□□□ 0.73
SSBP3-208ENST00000444533 PAK3O75914 559 aaPredicted RBP19.62■□□□□ 0.73
SSBP3-208ENST00000444533 LMOD2Q6P5Q4 547 aa19.62■□□□□ 0.73
SSBP3-208ENST00000444533 NINLQ9Y2I6 1382 aa19.61■□□□□ 0.73
SSBP3-208ENST00000444533 HDGFL2Q7Z4V5 671 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-208ENST00000444533 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
SSBP3-208ENST00000444533 TOPAZ1Q8N9V7 1692 aa19.6■□□□□ 0.73
SSBP3-208ENST00000444533 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
SSBP3-208ENST00000444533 TERF2IPQ9NYB0 399 aa19.6■□□□□ 0.73
SSBP3-208ENST00000444533 PXDNQ92626 1479 aa19.6■□□□□ 0.73
SSBP3-208ENST00000444533 SBNO1A3KN83 1393 aa19.59■□□□□ 0.73
SSBP3-208ENST00000444533 POLR3AO14802 1390 aaPredicted RBP19.59■□□□□ 0.73
SSBP3-208ENST00000444533 SPATA31A6Q5VVP1 1343 aa19.59■□□□□ 0.73
SSBP3-208ENST00000444533 ARHGEF10O15013 1369 aa19.58■□□□□ 0.73
SSBP3-208ENST00000444533 DISP3Q9P2K9 1392 aa19.58■□□□□ 0.73
SSBP3-208ENST00000444533 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
SSBP3-208ENST00000444533 SPATA31A3Q5VYP0 1347 aa19.57■□□□□ 0.72
SSBP3-208ENST00000444533 HAP1P54257 671 aaPredicted RBP19.57■□□□□ 0.72
SSBP3-208ENST00000444533 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
SSBP3-208ENST00000444533 MEX3CQ5U5Q3 659 aaKnown RBP19.55■□□□□ 0.72
SSBP3-208ENST00000444533 PNPLA6Q8IY17 1366 aa19.55■□□□□ 0.72
SSBP3-208ENST00000444533 NUTM2BA6NNL0 878 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-208ENST00000444533 NUTM2EB1AL46 878 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-208ENST00000444533 NUTM2AQ8IVF1 878 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-208ENST00000444533 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
SSBP3-208ENST00000444533 SHPRHQ149N8 1683 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms