RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 DLC1Q96QB1 1528 aa26.97■■□□□ 1.91
CCDC188-202ENST00000444532 JCADQ9P266 1359 aa26.96■■□□□ 1.91
CCDC188-202ENST00000444532 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.91
CCDC188-202ENST00000444532 SIN3AQ96ST3 1273 aa26.95■■□□□ 1.9
CCDC188-202ENST00000444532 PRAM1Q96QH2 718 aa26.93■■□□□ 1.9
CCDC188-202ENST00000444532 KIAA1210Q9ULL0 1709 aa26.93■■□□□ 1.9
CCDC188-202ENST00000444532 POGKQ9P215 609 aa26.92■■□□□ 1.9
CCDC188-202ENST00000444532 TRAK1Q9UPV9 953 aa26.92■■□□□ 1.9
CCDC188-202ENST00000444532 ORAI2Q96SN7 254 aa26.91■■□□□ 1.9
CCDC188-202ENST00000444532 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
CCDC188-202ENST00000444532 L3MBTL2Q969R5 705 aa26.9■■□□□ 1.9
CCDC188-202ENST00000444532 FMN2Q9NZ56 1722 aa26.88■■□□□ 1.89
CCDC188-202ENST00000444532 SHPRHQ149N8 1683 aa26.87■■□□□ 1.89
CCDC188-202ENST00000444532 SAFB2Q14151 953 aaKnown RBP eCLIP26.87■■□□□ 1.89
CCDC188-202ENST00000444532 LRRC59Q96AG4 307 aaKnown RBP26.87■■□□□ 1.89
CCDC188-202ENST00000444532 PHF23Q9BUL5 403 aaPredicted RBP26.87■■□□□ 1.89
CCDC188-202ENST00000444532 ESCO1Q5FWF5 840 aa26.86■■□□□ 1.89
CCDC188-202ENST00000444532 DDX17Q92841 729 aaKnown RBP26.85■■□□□ 1.89
CCDC188-202ENST00000444532 SPATA31A6Q5VVP1 1343 aa26.85■■□□□ 1.89
CCDC188-202ENST00000444532 NUTM2FA1L443 756 aa26.83■■□□□ 1.89
CCDC188-202ENST00000444532 ILDR2Q71H61 639 aa26.82■■□□□ 1.88
CCDC188-202ENST00000444532 ARHGEF28Q8N1W1 1705 aaKnown RBP26.82■■□□□ 1.88
CCDC188-202ENST00000444532 ADGRB2O60241 1585 aa26.81■■□□□ 1.88
CCDC188-202ENST00000444532 NBPF1Q3BBV0 1214 aa26.81■■□□□ 1.88
CCDC188-202ENST00000444532 SOS2Q07890 1332 aaPredicted RBP26.81■■□□□ 1.88
CCDC188-202ENST00000444532 NPHP3Q7Z494 1330 aa26.8■■□□□ 1.88
CCDC188-202ENST00000444532 RGPD8O14715 1765 aaPredicted RBP26.77■■□□□ 1.88
CCDC188-202ENST00000444532 MINK1Q8N4C8 1332 aaPredicted RBP26.77■■□□□ 1.88
CCDC188-202ENST00000444532 KIF1AQ12756 1690 aa26.76■■□□□ 1.87
CCDC188-202ENST00000444532 FOXO3O43524 673 aa26.76■■□□□ 1.87
CCDC188-202ENST00000444532 HIRIP3Q9BW71 556 aaPredicted RBP26.75■■□□□ 1.87
CCDC188-202ENST00000444532 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
CCDC188-202ENST00000444532 PNPLA6Q8IY17 1366 aa26.74■■□□□ 1.87
CCDC188-202ENST00000444532 EIF3AQ14152 1382 aaKnown RBP26.73■■□□□ 1.87
CCDC188-202ENST00000444532 TRPM1Q7Z4N2 1603 aa26.73■■□□□ 1.87
CCDC188-202ENST00000444532 WASLO00401 505 aaPredicted RBP26.73■■□□□ 1.87
CCDC188-202ENST00000444532 PXDNQ92626 1479 aa26.73■■□□□ 1.87
CCDC188-202ENST00000444532 LRP6O75581 1613 aa26.72■■□□□ 1.87
CCDC188-202ENST00000444532 RGS17Q9UGC6 210 aaPredicted RBP26.72■■□□□ 1.87
CCDC188-202ENST00000444532 PHF8Q9UPP1 1060 aa26.72■■□□□ 1.87
CCDC188-202ENST00000444532 USP32Q8NFA0 1604 aa26.71■■□□□ 1.87
CCDC188-202ENST00000444532 MEX3CQ5U5Q3 659 aaKnown RBP26.7■■□□□ 1.86
CCDC188-202ENST00000444532 TONSLQ96HA7 1378 aa26.7■■□□□ 1.86
CCDC188-202ENST00000444532 NUTM2BA6NNL0 878 aaPredicted RBP26.69■■□□□ 1.86
CCDC188-202ENST00000444532 NUTM2EB1AL46 878 aaPredicted RBP26.69■■□□□ 1.86
CCDC188-202ENST00000444532 NUTM2AQ8IVF1 878 aaPredicted RBP26.69■■□□□ 1.86
CCDC188-202ENST00000444532 TULP4Q9NRJ4 1543 aa26.69■■□□□ 1.86
CCDC188-202ENST00000444532 PCGF6Q9BYE7 350 aa26.67■■□□□ 1.86
CCDC188-202ENST00000444532 XPCQ01831 940 aaPredicted RBP26.66■■□□□ 1.86
CCDC188-202ENST00000444532 KRT28Q7Z3Y7 464 aa26.65■■□□□ 1.86
CCDC188-202ENST00000444532 ROCK2O75116 1388 aaKnown RBP26.65■■□□□ 1.86
CCDC188-202ENST00000444532 COL22A1Q8NFW1 1626 aaPredicted RBP26.65■■□□□ 1.86
CCDC188-202ENST00000444532 CENPJQ9HC77 1338 aaPredicted RBP26.65■■□□□ 1.86
CCDC188-202ENST00000444532 PSME1Q06323 249 aa26.64■■□□□ 1.86
CCDC188-202ENST00000444532 NBPF8Q3BBV2 869 aa26.64■■□□□ 1.86
CCDC188-202ENST00000444532 PRR36Q9H6K5 1346 aa26.64■■□□□ 1.85
CCDC188-202ENST00000444532 PMFBP1Q8TBY8 1022 aa26.62■■□□□ 1.85
CCDC188-202ENST00000444532 CDK19Q9BWU1 502 aa26.62■■□□□ 1.85
CCDC188-202ENST00000444532 SPATA31A3Q5VYP0 1347 aa26.61■■□□□ 1.85
CCDC188-202ENST00000444532 ITSN1Q15811 1721 aa26.6■■□□□ 1.85
CCDC188-202ENST00000444532 NUDT16Q96DE0 195 aaKnown RBP26.6■■□□□ 1.85
CCDC188-202ENST00000444532 POTEAQ6S8J7 498 aa26.59■■□□□ 1.85
CCDC188-202ENST00000444532 QRICH2Q9H0J4 1663 aa26.59■■□□□ 1.85
CCDC188-202ENST00000444532 GPRASP1Q5JY77 1395 aa26.58■■□□□ 1.85
CCDC188-202ENST00000444532 SOCS7O14512 581 aa26.58■■□□□ 1.85
CCDC188-202ENST00000444532 ZNF772Q68DY9 489 aaPredicted RBP26.58■■□□□ 1.85
CCDC188-202ENST00000444532 SBNO1A3KN83 1393 aa26.58■■□□□ 1.84
CCDC188-202ENST00000444532 ATP7BP35670 1465 aa26.57■■□□□ 1.84
CCDC188-202ENST00000444532 CLSPNQ9HAW4 1339 aa26.56■■□□□ 1.84
CCDC188-202ENST00000444532 TNS3Q68CZ2 1445 aa26.55■■□□□ 1.84
CCDC188-202ENST00000444532 ADAMTS2O95450 1211 aa26.54■■□□□ 1.84
CCDC188-202ENST00000444532 NGDNQ8NEJ9 315 aaKnown RBP26.54■■□□□ 1.84
CCDC188-202ENST00000444532 CCDC61Q9Y6R9 512 aa26.54■■□□□ 1.84
CCDC188-202ENST00000444532 C8orf37Q96NL8 207 aa26.53■■□□□ 1.84
CCDC188-202ENST00000444532 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
CCDC188-202ENST00000444532 AFF2P51816 1311 aa26.52■■□□□ 1.84
CCDC188-202ENST00000444532 TOPAZ1Q8N9V7 1692 aa26.51■■□□□ 1.83
CCDC188-202ENST00000444532 ARHGEF10O15013 1369 aa26.51■■□□□ 1.83
CCDC188-202ENST00000444532 SRPK2P78362 688 aaKnown RBP26.51■■□□□ 1.83
CCDC188-202ENST00000444532 NGLY1Q96IV0 654 aa26.51■■□□□ 1.83
CCDC188-202ENST00000444532 CARD11Q9BXL7 1154 aa26.51■■□□□ 1.83
CCDC188-202ENST00000444532 TRPM3Q9HCF6 1732 aaPredicted RBP26.5■■□□□ 1.83
CCDC188-202ENST00000444532 MARF1Q9Y4F3 1742 aaKnown RBP26.49■■□□□ 1.83
CCDC188-202ENST00000444532 PLEKHG3A1L390 1219 aa26.49■■□□□ 1.83
CCDC188-202ENST00000444532 EVC2Q86UK5 1308 aa26.48■■□□□ 1.83
CCDC188-202ENST00000444532 LMOD2Q6P5Q4 547 aa26.47■■□□□ 1.83
CCDC188-202ENST00000444532 TIMELESSQ9UNS1 1208 aa26.47■■□□□ 1.83
CCDC188-202ENST00000444532 POLR3AO14802 1390 aaPredicted RBP26.46■■□□□ 1.83
CCDC188-202ENST00000444532 CABP2Q9NPB3 220 aa26.46■■□□□ 1.83
CCDC188-202ENST00000444532 ALS2Q96Q42 1657 aa26.45■■□□□ 1.82
CCDC188-202ENST00000444532 ACEP12821 1306 aa26.44■■□□□ 1.82
CCDC188-202ENST00000444532 FNBP4Q8N3X1 1017 aaPredicted RBP26.44■■□□□ 1.82
CCDC188-202ENST00000444532 SBNO2Q9Y2G9 1366 aa26.43■■□□□ 1.82
CCDC188-202ENST00000444532 PPIP5K1Q6PFW1 1433 aa26.42■■□□□ 1.82
CCDC188-202ENST00000444532 PAK3O75914 559 aaPredicted RBP26.41■■□□□ 1.82
CCDC188-202ENST00000444532 HAP1P54257 671 aaPredicted RBP26.41■■□□□ 1.82
CCDC188-202ENST00000444532 QTRT2Q9H974 415 aaKnown RBP26.41■■□□□ 1.82
CCDC188-202ENST00000444532 RXRBP28702 533 aa26.4■■□□□ 1.82
CCDC188-202ENST00000444532 CABLES1Q8TDN4 633 aa26.4■■□□□ 1.82
CCDC188-202ENST00000444532 USP21Q9UK80 565 aa26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms