RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 KIAA1210Q9ULL0 1709 aa24.61■■□□□ 1.53
AP1S3-207ENST00000444408 PRAM1Q96QH2 718 aa24.6■■□□□ 1.53
AP1S3-207ENST00000444408 TRPM1Q7Z4N2 1603 aa24.59■■□□□ 1.53
AP1S3-207ENST00000444408 FAM135BQ49AJ0 1406 aa24.58■■□□□ 1.53
AP1S3-207ENST00000444408 SIRT1Q96EB6 747 aa24.57■■□□□ 1.52
AP1S3-207ENST00000444408 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
AP1S3-207ENST00000444408 ATF3P18847 181 aa24.56■■□□□ 1.52
AP1S3-207ENST00000444408 POGKQ9P215 609 aa24.54■■□□□ 1.52
AP1S3-207ENST00000444408 SLAIN2Q9P270 581 aa24.54■■□□□ 1.52
AP1S3-207ENST00000444408 CADPS2Q86UW7 1296 aa24.53■■□□□ 1.52
AP1S3-207ENST00000444408 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
AP1S3-207ENST00000444408 DCCP43146 1447 aa24.52■■□□□ 1.52
AP1S3-207ENST00000444408 ARHGEF28Q8N1W1 1705 aaKnown RBP24.51■■□□□ 1.51
AP1S3-207ENST00000444408 MST1RQ04912 1400 aa24.51■■□□□ 1.51
AP1S3-207ENST00000444408 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
AP1S3-207ENST00000444408 RALGAPBQ86X10 1494 aa24.5■■□□□ 1.51
AP1S3-207ENST00000444408 RGS17Q9UGC6 210 aaPredicted RBP24.49■■□□□ 1.51
AP1S3-207ENST00000444408 MINK1Q8N4C8 1332 aaPredicted RBP24.49■■□□□ 1.51
AP1S3-207ENST00000444408 NUTM2FA1L443 756 aa24.48■■□□□ 1.51
AP1S3-207ENST00000444408 TIMELESSQ9UNS1 1208 aa24.48■■□□□ 1.51
AP1S3-207ENST00000444408 GPRASP1Q5JY77 1395 aa24.47■■□□□ 1.51
AP1S3-207ENST00000444408 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
AP1S3-207ENST00000444408 ROBO1Q9Y6N7 1651 aa24.46■■□□□ 1.51
AP1S3-207ENST00000444408 CARD11Q9BXL7 1154 aa24.45■■□□□ 1.5
AP1S3-207ENST00000444408 BRINP3Q76B58 766 aa24.44■■□□□ 1.5
AP1S3-207ENST00000444408 C1orf167Q5SNV9 1468 aa24.44■■□□□ 1.5
AP1S3-207ENST00000444408 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
AP1S3-207ENST00000444408 CENPJQ9HC77 1338 aaPredicted RBP24.4■■□□□ 1.5
AP1S3-207ENST00000444408 FMN2Q9NZ56 1722 aa24.39■■□□□ 1.5
AP1S3-207ENST00000444408 ADGRB2O60241 1585 aa24.39■■□□□ 1.5
AP1S3-207ENST00000444408 DDX17Q92841 729 aaKnown RBP24.39■■□□□ 1.49
AP1S3-207ENST00000444408 WASLO00401 505 aaPredicted RBP24.36■■□□□ 1.49
AP1S3-207ENST00000444408 ESCO1Q5FWF5 840 aa24.35■■□□□ 1.49
AP1S3-207ENST00000444408 PRR36Q9H6K5 1346 aa24.35■■□□□ 1.49
AP1S3-207ENST00000444408 QRICH2Q9H0J4 1663 aa24.34■■□□□ 1.49
AP1S3-207ENST00000444408 POTEAQ6S8J7 498 aa24.34■■□□□ 1.49
AP1S3-207ENST00000444408 USP32Q8NFA0 1604 aa24.33■■□□□ 1.49
AP1S3-207ENST00000444408 CDK19Q9BWU1 502 aa24.33■■□□□ 1.49
AP1S3-207ENST00000444408 EIF3AQ14152 1382 aaKnown RBP24.31■■□□□ 1.48
AP1S3-207ENST00000444408 RGPD8O14715 1765 aaPredicted RBP24.3■■□□□ 1.48
AP1S3-207ENST00000444408 TULP4Q9NRJ4 1543 aa24.3■■□□□ 1.48
AP1S3-207ENST00000444408 AHDC1Q5TGY3 1603 aaPredicted RBP24.28■■□□□ 1.48
AP1S3-207ENST00000444408 PHLPP1O60346 1717 aa24.28■■□□□ 1.48
AP1S3-207ENST00000444408 ANKARQ7Z5J8 1434 aa24.27■■□□□ 1.48
AP1S3-207ENST00000444408 ST20-MTHFSA0A0A6YYL1 179 aa24.27■■□□□ 1.48
AP1S3-207ENST00000444408 FOXO3O43524 673 aa24.27■■□□□ 1.48
AP1S3-207ENST00000444408 CABP2Q9NPB3 220 aa24.27■■□□□ 1.48
AP1S3-207ENST00000444408 USP47Q96K76 1375 aa24.27■■□□□ 1.48
AP1S3-207ENST00000444408 JCADQ9P266 1359 aa24.27■■□□□ 1.48
AP1S3-207ENST00000444408 COL16A1Q07092 1604 aaPredicted RBP24.26■■□□□ 1.47
AP1S3-207ENST00000444408 NHSL1Q5SYE7 1610 aa24.26■■□□□ 1.47
AP1S3-207ENST00000444408 XPCQ01831 940 aaPredicted RBP24.26■■□□□ 1.47
AP1S3-207ENST00000444408 PMFBP1Q8TBY8 1022 aa24.26■■□□□ 1.47
AP1S3-207ENST00000444408 NUDT16Q96DE0 195 aaKnown RBP24.26■■□□□ 1.47
AP1S3-207ENST00000444408 ATP7BP35670 1465 aa24.26■■□□□ 1.47
AP1S3-207ENST00000444408 PHF8Q9UPP1 1060 aa24.25■■□□□ 1.47
AP1S3-207ENST00000444408 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
AP1S3-207ENST00000444408 TESK2Q96S53 571 aa24.22■■□□□ 1.47
AP1S3-207ENST00000444408 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
AP1S3-207ENST00000444408 SBNO2Q9Y2G9 1366 aa24.19■■□□□ 1.46
AP1S3-207ENST00000444408 SOS2Q07890 1332 aaPredicted RBP24.19■■□□□ 1.46
AP1S3-207ENST00000444408 PXDNQ92626 1479 aa24.19■■□□□ 1.46
AP1S3-207ENST00000444408 NPHP3Q7Z494 1330 aa24.18■■□□□ 1.46
AP1S3-207ENST00000444408 KIF1AQ12756 1690 aa24.18■■□□□ 1.46
AP1S3-207ENST00000444408 TOPAZ1Q8N9V7 1692 aa24.16■■□□□ 1.46
AP1S3-207ENST00000444408 KRT28Q7Z3Y7 464 aa24.16■■□□□ 1.46
AP1S3-207ENST00000444408 CCDC61Q9Y6R9 512 aa24.16■■□□□ 1.46
AP1S3-207ENST00000444408 SPATA31A6Q5VVP1 1343 aa24.15■■□□□ 1.46
AP1S3-207ENST00000444408 PPIP5K1Q6PFW1 1433 aa24.14■■□□□ 1.45
AP1S3-207ENST00000444408 HSPA5P11021 654 aaKnown RBP24.13■■□□□ 1.45
AP1S3-207ENST00000444408 NGDNQ8NEJ9 315 aaKnown RBP24.13■■□□□ 1.45
AP1S3-207ENST00000444408 LRRC59Q96AG4 307 aaKnown RBP24.13■■□□□ 1.45
AP1S3-207ENST00000444408 CABP1Q9NZU7 370 aa24.13■■□□□ 1.45
AP1S3-207ENST00000444408 PSME1Q06323 249 aa24.12■■□□□ 1.45
AP1S3-207ENST00000444408 ACEP12821 1306 aa24.11■■□□□ 1.45
AP1S3-207ENST00000444408 ITSN1Q15811 1721 aa24.11■■□□□ 1.45
AP1S3-207ENST00000444408 PLEKHG3A1L390 1219 aa24.11■■□□□ 1.45
AP1S3-207ENST00000444408 PNPLA6Q8IY17 1366 aa24.11■■□□□ 1.45
AP1S3-207ENST00000444408 EIF4G2P78344 907 aaKnown RBP eCLIP24.09■■□□□ 1.45
AP1S3-207ENST00000444408 MEX3CQ5U5Q3 659 aaKnown RBP24.09■■□□□ 1.45
AP1S3-207ENST00000444408 ZNF772Q68DY9 489 aaPredicted RBP24.09■■□□□ 1.45
AP1S3-207ENST00000444408 POLR3AO14802 1390 aaPredicted RBP24.08■■□□□ 1.45
AP1S3-207ENST00000444408 LRP6O75581 1613 aa24.08■■□□□ 1.45
AP1S3-207ENST00000444408 SHPRHQ149N8 1683 aa24.07■■□□□ 1.44
AP1S3-207ENST00000444408 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
AP1S3-207ENST00000444408 ATAD2Q6PL18 1390 aa24.05■■□□□ 1.44
AP1S3-207ENST00000444408 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
AP1S3-207ENST00000444408 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
AP1S3-207ENST00000444408 TMF1P82094 1093 aa24.05■■□□□ 1.44
AP1S3-207ENST00000444408 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
AP1S3-207ENST00000444408 PLEKHG5O94827 1062 aa24.04■■□□□ 1.44
AP1S3-207ENST00000444408 TRPM3Q9HCF6 1732 aaPredicted RBP24.04■■□□□ 1.44
AP1S3-207ENST00000444408 TNS3Q68CZ2 1445 aa24.03■■□□□ 1.44
AP1S3-207ENST00000444408 LMOD2Q6P5Q4 547 aa24.03■■□□□ 1.44
AP1S3-207ENST00000444408 TMC1Q8TDI8 760 aa24.03■■□□□ 1.44
AP1S3-207ENST00000444408 SLC12A5Q9H2X9 1139 aa24.03■■□□□ 1.44
AP1S3-207ENST00000444408 SBNO1A3KN83 1393 aa24.03■■□□□ 1.44
AP1S3-207ENST00000444408 PAK3O75914 559 aaPredicted RBP24.02■■□□□ 1.44
AP1S3-207ENST00000444408 CABLES1Q8TDN4 633 aa23.99■■□□□ 1.43
AP1S3-207ENST00000444408 PUS7Q96PZ0 661 aaKnown RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms