RNA–Protein interactions for RNA: ENST00000442892.2

SLC48A1-202, Transcript of solute carrier family 48 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC48A1, Length 1,024 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-202ENST00000442892 DCCP43146 1447 aa17.49■□□□□ 0.39
SLC48A1-202ENST00000442892 TRPM1Q7Z4N2 1603 aa17.49■□□□□ 0.39
SLC48A1-202ENST00000442892 NBPF1Q3BBV0 1214 aa17.48■□□□□ 0.39
SLC48A1-202ENST00000442892 PHLPP1O60346 1717 aa17.47■□□□□ 0.39
SLC48A1-202ENST00000442892 NUTM2FA1L443 756 aa17.47■□□□□ 0.39
SLC48A1-202ENST00000442892 DLC1Q96QB1 1528 aa17.47■□□□□ 0.39
SLC48A1-202ENST00000442892 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
SLC48A1-202ENST00000442892 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
SLC48A1-202ENST00000442892 MST1RQ04912 1400 aa17.46■□□□□ 0.39
SLC48A1-202ENST00000442892 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
SLC48A1-202ENST00000442892 MINK1Q8N4C8 1332 aaPredicted RBP17.45■□□□□ 0.38
SLC48A1-202ENST00000442892 HIRIP3Q9BW71 556 aaPredicted RBP17.44■□□□□ 0.38
SLC48A1-202ENST00000442892 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
SLC48A1-202ENST00000442892 FMN2Q9NZ56 1722 aa17.43■□□□□ 0.38
SLC48A1-202ENST00000442892 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
SLC48A1-202ENST00000442892 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
SLC48A1-202ENST00000442892 BRINP3Q76B58 766 aa17.41■□□□□ 0.38
SLC48A1-202ENST00000442892 C1orf167Q5SNV9 1468 aa17.41■□□□□ 0.38
SLC48A1-202ENST00000442892 CLSPNQ9HAW4 1339 aa17.41■□□□□ 0.38
SLC48A1-202ENST00000442892 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
SLC48A1-202ENST00000442892 ESCO1Q5FWF5 840 aa17.39■□□□□ 0.37
SLC48A1-202ENST00000442892 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
SLC48A1-202ENST00000442892 ORAI2Q96SN7 254 aa17.38■□□□□ 0.37
SLC48A1-202ENST00000442892 ADGRB2O60241 1585 aa17.37■□□□□ 0.37
SLC48A1-202ENST00000442892 CARD11Q9BXL7 1154 aa17.37■□□□□ 0.37
SLC48A1-202ENST00000442892 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
SLC48A1-202ENST00000442892 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
SLC48A1-202ENST00000442892 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
SLC48A1-202ENST00000442892 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
SLC48A1-202ENST00000442892 COL16A1Q07092 1604 aaPredicted RBP17.36■□□□□ 0.37
SLC48A1-202ENST00000442892 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
SLC48A1-202ENST00000442892 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
SLC48A1-202ENST00000442892 USP32Q8NFA0 1604 aa17.32■□□□□ 0.36
SLC48A1-202ENST00000442892 WASLO00401 505 aaPredicted RBP17.32■□□□□ 0.36
SLC48A1-202ENST00000442892 ITSN1Q15811 1721 aa17.31■□□□□ 0.36
SLC48A1-202ENST00000442892 XPCQ01831 940 aaPredicted RBP17.31■□□□□ 0.36
SLC48A1-202ENST00000442892 TULP4Q9NRJ4 1543 aa17.31■□□□□ 0.36
SLC48A1-202ENST00000442892 GPRASP1Q5JY77 1395 aa17.29■□□□□ 0.36
SLC48A1-202ENST00000442892 FOXO3O43524 673 aa17.29■□□□□ 0.36
SLC48A1-202ENST00000442892 SRPK2P78362 688 aaKnown RBP17.29■□□□□ 0.36
SLC48A1-202ENST00000442892 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
SLC48A1-202ENST00000442892 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
SLC48A1-202ENST00000442892 ANKARQ7Z5J8 1434 aa17.29■□□□□ 0.36
SLC48A1-202ENST00000442892 JCADQ9P266 1359 aa17.28■□□□□ 0.36
SLC48A1-202ENST00000442892 MED1Q15648 1581 aaPredicted RBP17.28■□□□□ 0.36
SLC48A1-202ENST00000442892 TIMELESSQ9UNS1 1208 aa17.28■□□□□ 0.36
SLC48A1-202ENST00000442892 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
SLC48A1-202ENST00000442892 NPHP3Q7Z494 1330 aa17.27■□□□□ 0.36
SLC48A1-202ENST00000442892 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
SLC48A1-202ENST00000442892 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
SLC48A1-202ENST00000442892 DISP3Q9P2K9 1392 aa17.26■□□□□ 0.35
SLC48A1-202ENST00000442892 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
SLC48A1-202ENST00000442892 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
SLC48A1-202ENST00000442892 ATP7BP35670 1465 aa17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 PLEKHG5O94827 1062 aa17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 LRRC59Q96AG4 307 aaKnown RBP17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
SLC48A1-202ENST00000442892 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
SLC48A1-202ENST00000442892 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
SLC48A1-202ENST00000442892 PSME1Q06323 249 aa17.23■□□□□ 0.35
SLC48A1-202ENST00000442892 NGDNQ8NEJ9 315 aaKnown RBP17.23■□□□□ 0.35
SLC48A1-202ENST00000442892 PXDNQ92626 1479 aa17.23■□□□□ 0.35
SLC48A1-202ENST00000442892 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
SLC48A1-202ENST00000442892 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
SLC48A1-202ENST00000442892 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
SLC48A1-202ENST00000442892 SOS2Q07890 1332 aaPredicted RBP17.21■□□□□ 0.35
SLC48A1-202ENST00000442892 USP47Q96K76 1375 aa17.21■□□□□ 0.35
SLC48A1-202ENST00000442892 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
SLC48A1-202ENST00000442892 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
SLC48A1-202ENST00000442892 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
SLC48A1-202ENST00000442892 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
SLC48A1-202ENST00000442892 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
SLC48A1-202ENST00000442892 SPATA31A6Q5VVP1 1343 aa17.18■□□□□ 0.34
SLC48A1-202ENST00000442892 LRP6O75581 1613 aa17.17■□□□□ 0.34
SLC48A1-202ENST00000442892 TRPM3Q9HCF6 1732 aaPredicted RBP17.16■□□□□ 0.34
SLC48A1-202ENST00000442892 TNS3Q68CZ2 1445 aa17.15■□□□□ 0.34
SLC48A1-202ENST00000442892 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
SLC48A1-202ENST00000442892 ACEP12821 1306 aa17.15■□□□□ 0.34
SLC48A1-202ENST00000442892 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
SLC48A1-202ENST00000442892 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
SLC48A1-202ENST00000442892 SPATA31A3Q5VYP0 1347 aa17.14■□□□□ 0.33
SLC48A1-202ENST00000442892 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
SLC48A1-202ENST00000442892 SBNO2Q9Y2G9 1366 aa17.14■□□□□ 0.33
SLC48A1-202ENST00000442892 TMC1Q8TDI8 760 aa17.13■□□□□ 0.33
SLC48A1-202ENST00000442892 SBNO1A3KN83 1393 aa17.12■□□□□ 0.33
SLC48A1-202ENST00000442892 ATAD2Q6PL18 1390 aa17.12■□□□□ 0.33
SLC48A1-202ENST00000442892 ALS2Q96Q42 1657 aa17.11■□□□□ 0.33
SLC48A1-202ENST00000442892 AKAP12Q02952 1782 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 C8orf37Q96NL8 207 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 TESK2Q96S53 571 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 ABCA3Q99758 1704 aa17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 MARF1Q9Y4F3 1742 aaKnown RBP17.1■□□□□ 0.33
SLC48A1-202ENST00000442892 TMF1P82094 1093 aa17.09■□□□□ 0.33
SLC48A1-202ENST00000442892 CABLES1Q8TDN4 633 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms