RNA–Protein interactions for RNA: ENST00000442478.1

LINC00380-201, long intergenic non-protein coding RNA 380, humanhuman

TSL 2 BASIC

Gene LINC00380, Length 353 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00380-201ENST00000442478 TRIM32Q13049 653 aa12.6□□□□□ -0.39
LINC00380-201ENST00000442478 BRICD5Q6PL45 260 aa12.6□□□□□ -0.39
LINC00380-201ENST00000442478 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
LINC00380-201ENST00000442478 FECHP22830 423 aa12.59□□□□□ -0.39
LINC00380-201ENST00000442478 DDX11L8A8MPP1 907 aa12.58□□□□□ -0.4
LINC00380-201ENST00000442478 DAXXQ9UER7 740 aaPredicted RBP12.58□□□□□ -0.4
LINC00380-201ENST00000442478 GMPRP36959 345 aa12.56□□□□□ -0.4
LINC00380-201ENST00000442478 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
LINC00380-201ENST00000442478 ZSCAN1Q8NBB4 408 aa12.56□□□□□ -0.4
LINC00380-201ENST00000442478 KCNV2Q8TDN2 545 aa12.55□□□□□ -0.4
LINC00380-201ENST00000442478 NXF1Q9UBU9 619 aaKnown RBP12.55□□□□□ -0.4
LINC00380-201ENST00000442478 GCGRP47871 477 aa12.54□□□□□ -0.4
LINC00380-201ENST00000442478 RNF19BQ6ZMZ0 732 aa12.54□□□□□ -0.4
LINC00380-201ENST00000442478 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
LINC00380-201ENST00000442478 LORP23490 312 aaPredicted RBP12.51□□□□□ -0.41
LINC00380-201ENST00000442478 HIC1Q14526 733 aa12.51□□□□□ -0.41
LINC00380-201ENST00000442478 NLRP7Q8WX94 980 aa12.5□□□□□ -0.41
LINC00380-201ENST00000442478 IRF7Q92985 503 aa12.5□□□□□ -0.41
LINC00380-201ENST00000442478 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
LINC00380-201ENST00000442478 MMP16P51512 607 aa12.47□□□□□ -0.41
LINC00380-201ENST00000442478 SULF1Q8IWU6 871 aa12.47□□□□□ -0.41
LINC00380-201ENST00000442478 VEGFBP49765 207 aa12.46□□□□□ -0.41
LINC00380-201ENST00000442478 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
LINC00380-201ENST00000442478 ALDH1A1P00352 501 aa12.44□□□□□ -0.42
LINC00380-201ENST00000442478 Q3C1V9 767 aa12.44□□□□□ -0.42
LINC00380-201ENST00000442478 NPAS3Q8IXF0 933 aa12.44□□□□□ -0.42
LINC00380-201ENST00000442478 CCDC24Q8N4L8 307 aa12.44□□□□□ -0.42
LINC00380-201ENST00000442478 SKOR1P84550 965 aa12.43□□□□□ -0.42
LINC00380-201ENST00000442478 SEMA3EO15041 775 aa12.42□□□□□ -0.42
LINC00380-201ENST00000442478 BMP1P13497 986 aa12.41□□□□□ -0.42
LINC00380-201ENST00000442478 SUZ12Q15022 739 aaKnown RBP12.41□□□□□ -0.42
LINC00380-201ENST00000442478 H3BM21 787 aa12.4□□□□□ -0.42
LINC00380-201ENST00000442478 GNPATO15228 680 aa12.4□□□□□ -0.42
LINC00380-201ENST00000442478 WNT7BP56706 349 aa12.4□□□□□ -0.42
LINC00380-201ENST00000442478 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
LINC00380-201ENST00000442478 TRIM46Q7Z4K8 759 aa12.39□□□□□ -0.43
LINC00380-201ENST00000442478 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
LINC00380-201ENST00000442478 ERBB4Q15303 1308 aa12.38□□□□□ -0.43
LINC00380-201ENST00000442478 CAPN5O15484 640 aaPredicted RBP12.37□□□□□ -0.43
LINC00380-201ENST00000442478 PHOX2BQ99453 314 aa12.36□□□□□ -0.43
LINC00380-201ENST00000442478 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
LINC00380-201ENST00000442478 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
LINC00380-201ENST00000442478 WASF2Q9Y6W5 498 aa12.33□□□□□ -0.44
LINC00380-201ENST00000442478 EHBP1Q8NDI1 1231 aa12.3□□□□□ -0.44
LINC00380-201ENST00000442478 SIAH2O43255 324 aa12.29□□□□□ -0.44
LINC00380-201ENST00000442478 ZFP42Q96MM3 310 aa12.28□□□□□ -0.44
LINC00380-201ENST00000442478 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
LINC00380-201ENST00000442478 GPR37O15354 613 aa12.26□□□□□ -0.45
LINC00380-201ENST00000442478 KDM4AO75164 1064 aa12.26□□□□□ -0.45
LINC00380-201ENST00000442478 NISCHQ9Y2I1 1504 aa12.26□□□□□ -0.45
LINC00380-201ENST00000442478 KCTD17Q8N5Z5 321 aa12.25□□□□□ -0.45
LINC00380-201ENST00000442478 HLA-CQ95604 372 aa12.25□□□□□ -0.45
LINC00380-201ENST00000442478 CD46P15529 392 aa12.24□□□□□ -0.45
LINC00380-201ENST00000442478 SMYD5Q6GMV2 418 aa12.22□□□□□ -0.45
LINC00380-201ENST00000442478 JUNDP17535 347 aa12.21□□□□□ -0.45
LINC00380-201ENST00000442478 KCNMA1Q12791 1236 aa12.21□□□□□ -0.45
LINC00380-201ENST00000442478 PTCRAQ6ISU1 281 aaPredicted RBP12.21□□□□□ -0.45
LINC00380-201ENST00000442478 TESPA1A2RU30 521 aaPredicted RBP12.2□□□□□ -0.46
LINC00380-201ENST00000442478 NUDT12Q9BQG2 462 aa12.18□□□□□ -0.46
LINC00380-201ENST00000442478 USP46P62068 366 aa12.17□□□□□ -0.46
LINC00380-201ENST00000442478 SOBPA7XYQ1 873 aa12.16□□□□□ -0.46
LINC00380-201ENST00000442478 VSIG8P0DPA2 414 aa12.16□□□□□ -0.46
LINC00380-201ENST00000442478 SH3BP2P78314 561 aa12.16□□□□□ -0.46
LINC00380-201ENST00000442478 SCARF1Q14162 830 aa12.16□□□□□ -0.46
LINC00380-201ENST00000442478 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
LINC00380-201ENST00000442478 GSK3AP49840 483 aa12.15□□□□□ -0.46
LINC00380-201ENST00000442478 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
LINC00380-201ENST00000442478 MRPL14Q6P1L8 145 aaKnown RBP12.15□□□□□ -0.46
LINC00380-201ENST00000442478 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.46
LINC00380-201ENST00000442478 HOXA2O43364 376 aa12.14□□□□□ -0.47
LINC00380-201ENST00000442478 TMEM151AQ8N4L1 468 aa12.12□□□□□ -0.47
LINC00380-201ENST00000442478 TLL2Q9Y6L7 1015 aa12.12□□□□□ -0.47
LINC00380-201ENST00000442478 NNTQ13423 1086 aa12.1□□□□□ -0.47
LINC00380-201ENST00000442478 GDF11O95390 407 aa12.09□□□□□ -0.47
LINC00380-201ENST00000442478 PLEKHG3A1L390 1219 aa12.08□□□□□ -0.48
LINC00380-201ENST00000442478 RETREG3Q86VR2 466 aa12.08□□□□□ -0.48
LINC00380-201ENST00000442478 RASSF7Q02833 373 aa12.07□□□□□ -0.48
LINC00380-201ENST00000442478 LINC01559Q495D7 138 aa12.07□□□□□ -0.48
LINC00380-201ENST00000442478 TIMP2P16035 220 aa12.06□□□□□ -0.48
LINC00380-201ENST00000442478 WDR4P57081 412 aaKnown RBP12.06□□□□□ -0.48
LINC00380-201ENST00000442478 MAN1A2O60476 641 aa12.05□□□□□ -0.48
LINC00380-201ENST00000442478 CCNYL3P0C7X3 344 aa12.05□□□□□ -0.48
LINC00380-201ENST00000442478 MDM2Q00987 491 aaPredicted RBP12.05□□□□□ -0.48
LINC00380-201ENST00000442478 GPIHBP1Q8IV16 184 aa12.05□□□□□ -0.48
LINC00380-201ENST00000442478 BAP1Q92560 729 aa12.05□□□□□ -0.48
LINC00380-201ENST00000442478 MS4A1P11836 297 aa12.04□□□□□ -0.48
LINC00380-201ENST00000442478 UNC93B1Q9H1C4 597 aa12.04□□□□□ -0.48
LINC00380-201ENST00000442478 ADH1CP00326 375 aa12.03□□□□□ -0.48
LINC00380-201ENST00000442478 PPFIA3O75145 1194 aa12.02□□□□□ -0.49
LINC00380-201ENST00000442478 VARSP26640 1264 aaKnown RBP12.02□□□□□ -0.49
LINC00380-201ENST00000442478 MPNDQ8N594 471 aa12.01□□□□□ -0.49
LINC00380-201ENST00000442478 EVA1BQ9NVM1 165 aa12□□□□□ -0.49
LINC00380-201ENST00000442478 C6orf229H3BNL8 230 aa11.99□□□□□ -0.49
LINC00380-201ENST00000442478 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
LINC00380-201ENST00000442478 C6orf118Q5T5N4 469 aa11.99□□□□□ -0.49
LINC00380-201ENST00000442478 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
LINC00380-201ENST00000442478 ZNF511Q8NB15 262 aa11.99□□□□□ -0.49
LINC00380-201ENST00000442478 KLF16Q9BXK1 252 aaPredicted RBP11.99□□□□□ -0.49
LINC00380-201ENST00000442478 ADAMTS8Q9UP79 889 aa11.99□□□□□ -0.49
LINC00380-201ENST00000442478 RNF225M0QZC1 329 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms