RNA–Protein interactions for RNA: ENST00000442309.5

GCFC2-204, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5

Gene GCFC2, Length 642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-204ENST00000442309 NUTM2AQ8IVF1 878 aaPredicted RBP30.66■■■□□ 2.5
GCFC2-204ENST00000442309 ABCC11Q96J66 1382 aa30.66■■■□□ 2.5
GCFC2-204ENST00000442309 YTHDC2Q9H6S0 1430 aaKnown RBP30.65■■■□□ 2.5
GCFC2-204ENST00000442309 HRCP23327 699 aa30.65■■■□□ 2.5
GCFC2-204ENST00000442309 CDC42BPGQ6DT37 1551 aa30.65■■■□□ 2.5
GCFC2-204ENST00000442309 PLEKHH1Q9ULM0 1364 aa30.65■■■□□ 2.5
GCFC2-204ENST00000442309 CFAP70Q5T0N1 1121 aa30.64■■■□□ 2.5
GCFC2-204ENST00000442309 LRRC59Q96AG4 307 aaKnown RBP30.64■■■□□ 2.5
GCFC2-204ENST00000442309 C14orf93Q9H972 538 aaKnown RBP30.64■■■□□ 2.5
GCFC2-204ENST00000442309 LAMC1P11047 1609 aa30.62■■■□□ 2.49
GCFC2-204ENST00000442309 PNPLA6Q8IY17 1366 aa30.58■■■□□ 2.49
GCFC2-204ENST00000442309 DHX57Q6P158 1386 aaKnown RBP30.57■■■□□ 2.48
GCFC2-204ENST00000442309 NUTM2FA1L443 756 aa30.57■■■□□ 2.48
GCFC2-204ENST00000442309 ESCO1Q5FWF5 840 aa30.57■■■□□ 2.48
GCFC2-204ENST00000442309 KDM2AQ9Y2K7 1162 aa30.56■■■□□ 2.48
GCFC2-204ENST00000442309 SOS2Q07890 1332 aaPredicted RBP30.53■■■□□ 2.48
GCFC2-204ENST00000442309 DCAF11Q8TEB1 546 aa30.53■■■□□ 2.48
GCFC2-204ENST00000442309 ZNF772Q68DY9 489 aaPredicted RBP30.51■■■□□ 2.47
GCFC2-204ENST00000442309 FMN2Q9NZ56 1722 aa30.5■■■□□ 2.47
GCFC2-204ENST00000442309 SAFB2Q14151 953 aaKnown RBP eCLIP30.5■■■□□ 2.47
GCFC2-204ENST00000442309 SIRT1Q96EB6 747 aa30.5■■■□□ 2.47
GCFC2-204ENST00000442309 PRAM1Q96QH2 718 aa30.48■■■□□ 2.47
GCFC2-204ENST00000442309 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
GCFC2-204ENST00000442309 FOXO3O43524 673 aa30.46■■■□□ 2.47
GCFC2-204ENST00000442309 XPCQ01831 940 aaPredicted RBP30.46■■■□□ 2.47
GCFC2-204ENST00000442309 C8orf37Q96NL8 207 aa30.46■■■□□ 2.47
GCFC2-204ENST00000442309 AFF2P51816 1311 aa30.46■■■□□ 2.47
GCFC2-204ENST00000442309 ADGRB1O14514 1584 aa30.45■■■□□ 2.47
GCFC2-204ENST00000442309 POGKQ9P215 609 aa30.44■■■□□ 2.46
GCFC2-204ENST00000442309 PXDNQ92626 1479 aa30.44■■■□□ 2.46
GCFC2-204ENST00000442309 DLC1Q96QB1 1528 aa30.43■■■□□ 2.46
GCFC2-204ENST00000442309 ADAMTS2O95450 1211 aa30.43■■■□□ 2.46
GCFC2-204ENST00000442309 TRAK1Q9UPV9 953 aa30.43■■■□□ 2.46
GCFC2-204ENST00000442309 RGPD8O14715 1765 aaPredicted RBP30.4■■■□□ 2.46
GCFC2-204ENST00000442309 STAC3Q96MF2 364 aa30.39■■■□□ 2.46
GCFC2-204ENST00000442309 KIF1AQ12756 1690 aa30.39■■■□□ 2.45
GCFC2-204ENST00000442309 COL22A1Q8NFW1 1626 aaPredicted RBP30.38■■■□□ 2.45
GCFC2-204ENST00000442309 RXRBP28702 533 aa30.35■■■□□ 2.45
GCFC2-204ENST00000442309 NGLY1Q96IV0 654 aa30.35■■■□□ 2.45
GCFC2-204ENST00000442309 HIRIP3Q9BW71 556 aaPredicted RBP30.34■■■□□ 2.45
GCFC2-204ENST00000442309 PHF8Q9UPP1 1060 aa30.33■■■□□ 2.45
GCFC2-204ENST00000442309 MINK1Q8N4C8 1332 aaPredicted RBP30.32■■■□□ 2.44
GCFC2-204ENST00000442309 ADGRB2O60241 1585 aa30.32■■■□□ 2.44
GCFC2-204ENST00000442309 KRT28Q7Z3Y7 464 aa30.3■■■□□ 2.44
GCFC2-204ENST00000442309 QTRT2Q9H974 415 aaKnown RBP30.29■■■□□ 2.44
GCFC2-204ENST00000442309 USP32Q8NFA0 1604 aa30.29■■■□□ 2.44
GCFC2-204ENST00000442309 ARHGEF28Q8N1W1 1705 aaKnown RBP30.27■■■□□ 2.44
GCFC2-204ENST00000442309 SPATA31A3Q5VYP0 1347 aa30.26■■■□□ 2.44
GCFC2-204ENST00000442309 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
GCFC2-204ENST00000442309 PMFBP1Q8TBY8 1022 aa30.25■■■□□ 2.43
GCFC2-204ENST00000442309 USP21Q9UK80 565 aa30.25■■■□□ 2.43
GCFC2-204ENST00000442309 MARF1Q9Y4F3 1742 aaKnown RBP30.23■■■□□ 2.43
GCFC2-204ENST00000442309 CDK12Q9NYV4 1490 aaPredicted RBP30.23■■■□□ 2.43
GCFC2-204ENST00000442309 RBM6P78332 1123 aaKnown RBP30.22■■■□□ 2.43
GCFC2-204ENST00000442309 PSME1Q06323 249 aa30.22■■■□□ 2.43
GCFC2-204ENST00000442309 KIAA1210Q9ULL0 1709 aa30.21■■■□□ 2.43
GCFC2-204ENST00000442309 TNS3Q68CZ2 1445 aa30.21■■■□□ 2.43
GCFC2-204ENST00000442309 EIF3AQ14152 1382 aaKnown RBP30.2■■■□□ 2.43
GCFC2-204ENST00000442309 WASLO00401 505 aaPredicted RBP30.2■■■□□ 2.43
GCFC2-204ENST00000442309 FNBP4Q8N3X1 1017 aaPredicted RBP30.2■■■□□ 2.43
GCFC2-204ENST00000442309 TULP4Q9NRJ4 1543 aa30.2■■■□□ 2.42
GCFC2-204ENST00000442309 PLEKHG5O94827 1062 aa30.19■■■□□ 2.42
GCFC2-204ENST00000442309 PRR36Q9H6K5 1346 aa30.19■■■□□ 2.42
GCFC2-204ENST00000442309 LMOD2Q6P5Q4 547 aa30.18■■■□□ 2.42
GCFC2-204ENST00000442309 RGS12O14924 1447 aa30.18■■■□□ 2.42
GCFC2-204ENST00000442309 TRPC5Q9UL62 973 aaPredicted RBP30.17■■■□□ 2.42
GCFC2-204ENST00000442309 SBNO1A3KN83 1393 aa30.16■■■□□ 2.42
GCFC2-204ENST00000442309 NBPF1Q3BBV0 1214 aa30.16■■■□□ 2.42
GCFC2-204ENST00000442309 HAP1P54257 671 aaPredicted RBP30.14■■■□□ 2.42
GCFC2-204ENST00000442309 SIN3AQ96ST3 1273 aa30.14■■■□□ 2.42
GCFC2-204ENST00000442309 CABLES1Q8TDN4 633 aa30.13■■■□□ 2.41
GCFC2-204ENST00000442309 ATRNO75882 1429 aa30.13■■■□□ 2.41
GCFC2-204ENST00000442309 BCL9LQ86UU0 1499 aa30.12■■■□□ 2.41
GCFC2-204ENST00000442309 UPF1Q92900 1129 aaKnown RBP eCLIP30.11■■■□□ 2.41
GCFC2-204ENST00000442309 L3MBTL2Q969R5 705 aa30.11■■■□□ 2.41
GCFC2-204ENST00000442309 ARHGEF10O15013 1369 aa30.11■■■□□ 2.41
GCFC2-204ENST00000442309 NEUROD1Q13562 356 aa30.1■■■□□ 2.41
GCFC2-204ENST00000442309 GPRASP1Q5JY77 1395 aa30.1■■■□□ 2.41
GCFC2-204ENST00000442309 TRPM3Q9HCF6 1732 aaPredicted RBP30.1■■■□□ 2.41
GCFC2-204ENST00000442309 ITSN1Q15811 1721 aa30.08■■■□□ 2.41
GCFC2-204ENST00000442309 ATP7BP35670 1465 aa30.08■■■□□ 2.41
GCFC2-204ENST00000442309 NGDNQ8NEJ9 315 aaKnown RBP30.08■■■□□ 2.41
GCFC2-204ENST00000442309 ABCA3Q99758 1704 aa30.08■■■□□ 2.41
GCFC2-204ENST00000442309 NUDT16Q96DE0 195 aaKnown RBP30.07■■■□□ 2.4
GCFC2-204ENST00000442309 CDK19Q9BWU1 502 aa30.07■■■□□ 2.4
GCFC2-204ENST00000442309 SLIT2O94813 1529 aa30.04■■■□□ 2.4
GCFC2-204ENST00000442309 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.04■■■□□ 2.4
GCFC2-204ENST00000442309 ALS2Q96Q42 1657 aa30.03■■■□□ 2.4
GCFC2-204ENST00000442309 UNC5CLQ8IV45 518 aa30.02■■■□□ 2.4
GCFC2-204ENST00000442309 PAK3O75914 559 aaPredicted RBP30.01■■■□□ 2.39
GCFC2-204ENST00000442309 CENPJQ9HC77 1338 aaPredicted RBP29.99■■■□□ 2.39
GCFC2-204ENST00000442309 GJD4Q96KN9 370 aaPredicted RBP29.99■■■□□ 2.39
GCFC2-204ENST00000442309 PLCH1Q4KWH8 1693 aa29.98■■■□□ 2.39
GCFC2-204ENST00000442309 TOPAZ1Q8N9V7 1692 aa29.98■■■□□ 2.39
GCFC2-204ENST00000442309 TRPM1Q7Z4N2 1603 aa29.97■■■□□ 2.39
GCFC2-204ENST00000442309 QRICH2Q9H0J4 1663 aa29.97■■■□□ 2.39
GCFC2-204ENST00000442309 CCDC61Q9Y6R9 512 aa29.95■■■□□ 2.39
GCFC2-204ENST00000442309 RALGAPBQ86X10 1494 aa29.94■■■□□ 2.38
GCFC2-204ENST00000442309 SRPK2P78362 688 aaKnown RBP29.94■■■□□ 2.38
GCFC2-204ENST00000442309 GLI3P10071 1580 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms