RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 SPRYD3Q8NCJ5 442 aa9.53□□□□□ -0.88
HDAC9-215ENST00000441986 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
HDAC9-215ENST00000441986 FGD6Q6ZV73 1430 aa9.52□□□□□ -0.89
HDAC9-215ENST00000441986 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
HDAC9-215ENST00000441986 PHLPP1O60346 1717 aa9.51□□□□□ -0.89
HDAC9-215ENST00000441986 RIMS2Q9UQ26 1411 aa9.51□□□□□ -0.89
HDAC9-215ENST00000441986 NUTM2BA6NNL0 878 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-215ENST00000441986 NUTM2EB1AL46 878 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-215ENST00000441986 NUTM2AQ8IVF1 878 aaPredicted RBP9.51□□□□□ -0.89
HDAC9-215ENST00000441986 AMOTL2Q9Y2J4 779 aa9.51□□□□□ -0.89
HDAC9-215ENST00000441986 RPRD2Q5VT52 1461 aaKnown RBP9.51□□□□□ -0.89
HDAC9-215ENST00000441986 PTPN23Q9H3S7 1636 aa9.5□□□□□ -0.89
HDAC9-215ENST00000441986 FAM50AQ14320 339 aaKnown RBP9.5□□□□□ -0.89
HDAC9-215ENST00000441986 NUTM2DQ5VT03 806 aaPredicted RBP9.5□□□□□ -0.89
HDAC9-215ENST00000441986 LRRC59Q96AG4 307 aaKnown RBP9.5□□□□□ -0.89
HDAC9-215ENST00000441986 ADGRB3O60242 1522 aa9.5□□□□□ -0.89
HDAC9-215ENST00000441986 NWD1Q149M9 1564 aa9.5□□□□□ -0.89
HDAC9-215ENST00000441986 PIK3R4Q99570 1358 aa9.5□□□□□ -0.89
HDAC9-215ENST00000441986 ZFYVE9O95405 1425 aa9.49□□□□□ -0.89
HDAC9-215ENST00000441986 BRINP3Q76B58 766 aa9.49□□□□□ -0.89
HDAC9-215ENST00000441986 QTRT2Q9H974 415 aaKnown RBP9.49□□□□□ -0.89
HDAC9-215ENST00000441986 ANKRD50Q9ULJ7 1429 aa9.48□□□□□ -0.89
HDAC9-215ENST00000441986 CHADLQ6NUI6 762 aa9.47□□□□□ -0.89
HDAC9-215ENST00000441986 CHD2O14647 1828 aaKnown RBP9.47□□□□□ -0.89
HDAC9-215ENST00000441986 CROCC2H7BZ55 1655 aa9.46□□□□□ -0.89
HDAC9-215ENST00000441986 VGFO15240 615 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-215ENST00000441986 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.9
HDAC9-215ENST00000441986 NGLY1Q96IV0 654 aa9.46□□□□□ -0.9
HDAC9-215ENST00000441986 AFF2P51816 1311 aa9.46□□□□□ -0.9
HDAC9-215ENST00000441986 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.9
HDAC9-215ENST00000441986 LRP6O75581 1613 aa9.45□□□□□ -0.9
HDAC9-215ENST00000441986 COL16A1Q07092 1604 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-215ENST00000441986 C8orf37Q96NL8 207 aa9.45□□□□□ -0.9
HDAC9-215ENST00000441986 SGIP1Q9BQI5 828 aa9.45□□□□□ -0.9
HDAC9-215ENST00000441986 ADAMTS13Q76LX8 1427 aa9.45□□□□□ -0.9
HDAC9-215ENST00000441986 ADGRL2O95490 1459 aa9.45□□□□□ -0.9
HDAC9-215ENST00000441986 CDK12Q9NYV4 1490 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-215ENST00000441986 FARP1Q9Y4F1 1045 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-215ENST00000441986 SETD1AO15047 1707 aaKnown RBP9.43□□□□□ -0.9
HDAC9-215ENST00000441986 TMEM131LA2VDJ0 1609 aa9.43□□□□□ -0.9
HDAC9-215ENST00000441986 AHDC1Q5TGY3 1603 aaPredicted RBP9.43□□□□□ -0.9
HDAC9-215ENST00000441986 SETD5Q9C0A6 1442 aa9.43□□□□□ -0.9
HDAC9-215ENST00000441986 PYGBP11216 843 aa9.43□□□□□ -0.9
HDAC9-215ENST00000441986 ZNF326Q5BKZ1 582 aaKnown RBP9.43□□□□□ -0.9
HDAC9-215ENST00000441986 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-215ENST00000441986 DCCP43146 1447 aa9.42□□□□□ -0.9
HDAC9-215ENST00000441986 FXR2P51116 673 aaKnown RBP eCLIP9.42□□□□□ -0.9
HDAC9-215ENST00000441986 KDM2AQ9Y2K7 1162 aa9.42□□□□□ -0.9
HDAC9-215ENST00000441986 DIP2AQ14689 1571 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 NUP155O75694 1391 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 STK25O00506 426 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 ADAMTS2O95450 1211 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 SHPRHQ149N8 1683 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 TRPM2O94759 1503 aa9.41□□□□□ -0.9
HDAC9-215ENST00000441986 PTPRUQ92729 1446 aa9.4□□□□□ -0.9
HDAC9-215ENST00000441986 PRKAR2AP13861 404 aaKnown RBP9.4□□□□□ -0.9
HDAC9-215ENST00000441986 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-215ENST00000441986 DDX17Q92841 729 aaKnown RBP9.4□□□□□ -0.9
HDAC9-215ENST00000441986 TSHZ2Q9NRE2 1034 aa9.4□□□□□ -0.9
HDAC9-215ENST00000441986 ZRANB1Q9UGI0 708 aa9.4□□□□□ -0.9
HDAC9-215ENST00000441986 USP21Q9UK80 565 aa9.4□□□□□ -0.9
HDAC9-215ENST00000441986 CCDC125Q86Z20 511 aa9.39□□□□□ -0.91
HDAC9-215ENST00000441986 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-215ENST00000441986 MST1RQ04912 1400 aa9.39□□□□□ -0.91
HDAC9-215ENST00000441986 GCC2Q8IWJ2 1684 aa9.39□□□□□ -0.91
HDAC9-215ENST00000441986 ROCK1Q13464 1354 aa9.38□□□□□ -0.91
HDAC9-215ENST00000441986 ASXL1Q8IXJ9 1541 aa9.38□□□□□ -0.91
HDAC9-215ENST00000441986 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
HDAC9-215ENST00000441986 MYO5BQ9ULV0 1848 aa9.38□□□□□ -0.91
HDAC9-215ENST00000441986 METP08581 1390 aa9.37□□□□□ -0.91
HDAC9-215ENST00000441986 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
HDAC9-215ENST00000441986 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
HDAC9-215ENST00000441986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-215ENST00000441986 ITGAEP38570 1179 aa9.37□□□□□ -0.91
HDAC9-215ENST00000441986 ZFP91Q96JP5 570 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-215ENST00000441986 TSPYL2Q9H2G4 693 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-215ENST00000441986 HAX1O00165 279 aa9.36□□□□□ -0.91
HDAC9-215ENST00000441986 BCL11BQ9C0K0 894 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-215ENST00000441986 SOS2Q07890 1332 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-215ENST00000441986 RGS12O14924 1447 aa9.35□□□□□ -0.91
HDAC9-215ENST00000441986 ZNF467Q7Z7K2 595 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-215ENST00000441986 ORAI2Q96SN7 254 aa9.35□□□□□ -0.91
HDAC9-215ENST00000441986 ADGRL3Q9HAR2 1447 aa9.34□□□□□ -0.91
HDAC9-215ENST00000441986 GTPBP6O43824 516 aaPredicted RBP9.34□□□□□ -0.91
HDAC9-215ENST00000441986 STK24Q9Y6E0 443 aa9.34□□□□□ -0.91
HDAC9-215ENST00000441986 E9PCH4 1651 aa9.34□□□□□ -0.91
HDAC9-215ENST00000441986 C1orf167Q5SNV9 1468 aa9.34□□□□□ -0.91
HDAC9-215ENST00000441986 UNC13BO14795 1591 aa9.33□□□□□ -0.92
HDAC9-215ENST00000441986 ESCO1Q5FWF5 840 aa9.33□□□□□ -0.92
HDAC9-215ENST00000441986 CCDC61Q9Y6R9 512 aa9.33□□□□□ -0.92
HDAC9-215ENST00000441986 SETBP1Q9Y6X0 1596 aa9.33□□□□□ -0.92
HDAC9-215ENST00000441986 PTCH1Q13635 1447 aa9.32□□□□□ -0.92
HDAC9-215ENST00000441986 NHSL1Q5SYE7 1610 aa9.32□□□□□ -0.92
HDAC9-215ENST00000441986 IQGAP3Q86VI3 1631 aa9.32□□□□□ -0.92
HDAC9-215ENST00000441986 GJD4Q96KN9 370 aaPredicted RBP9.32□□□□□ -0.92
HDAC9-215ENST00000441986 RPGRIP1LQ68CZ1 1315 aa9.31□□□□□ -0.92
HDAC9-215ENST00000441986 NPHP3Q7Z494 1330 aa9.31□□□□□ -0.92
HDAC9-215ENST00000441986 RYDENQ9NUL5 291 aaKnown RBP9.31□□□□□ -0.92
HDAC9-215ENST00000441986 LRPPRCP42704 1394 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms