RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ABCA6Q8N139 1617 aa21.41■■□□□ 1.02
PMS1-213ENST00000441310 MLECQ14165 292 aa21.4■■□□□ 1.02
PMS1-213ENST00000441310 EIF3AQ14152 1382 aaKnown RBP21.4■■□□□ 1.02
PMS1-213ENST00000441310 IDI1Q13907 227 aa21.39■■□□□ 1.02
PMS1-213ENST00000441310 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.02
PMS1-213ENST00000441310 MCM4P33991 863 aa21.39■■□□□ 1.01
PMS1-213ENST00000441310 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.39■■□□□ 1.01
PMS1-213ENST00000441310 KIF1BO60333 1816 aa21.38■■□□□ 1.01
PMS1-213ENST00000441310 PPP2R1AP30153 589 aa21.38■■□□□ 1.01
PMS1-213ENST00000441310 FBXO31Q5XUX0 539 aaPredicted RBP21.38■■□□□ 1.01
PMS1-213ENST00000441310 ADAMTS8Q9UP79 889 aa21.38■■□□□ 1.01
PMS1-213ENST00000441310 MROH2AA6NES4 1674 aa21.37■■□□□ 1.01
PMS1-213ENST00000441310 MRE11P49959 708 aa21.37■■□□□ 1.01
PMS1-213ENST00000441310 NEO1Q92859 1461 aa21.37■■□□□ 1.01
PMS1-213ENST00000441310 STK26Q9P289 416 aa21.37■■□□□ 1.01
PMS1-213ENST00000441310 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
PMS1-213ENST00000441310 IGHDP01880 384 aa21.36■■□□□ 1.01
PMS1-213ENST00000441310 PDCL3Q9H2J4 239 aa21.36■■□□□ 1.01
PMS1-213ENST00000441310 TRAK2O60296 914 aa21.36■■□□□ 1.01
PMS1-213ENST00000441310 TNNT2P45379 298 aaPredicted RBP21.36■■□□□ 1.01
PMS1-213ENST00000441310 TRIM44Q96DX7 344 aaPredicted RBP21.36■■□□□ 1.01
PMS1-213ENST00000441310 TBC1D2Q9BYX2 928 aa21.36■■□□□ 1.01
PMS1-213ENST00000441310 CFAP74Q9C0B2 1584 aa21.36■■□□□ 1.01
PMS1-213ENST00000441310 CENPJQ9HC77 1338 aaPredicted RBP21.35■■□□□ 1.01
PMS1-213ENST00000441310 DUSP27Q5VZP5 1158 aa21.35■■□□□ 1.01
PMS1-213ENST00000441310 MAP3K4Q9Y6R4 1608 aa21.35■■□□□ 1.01
PMS1-213ENST00000441310 GRPEL1Q9HAV7 217 aa21.34■■□□□ 1.01
PMS1-213ENST00000441310 ABCC3O15438 1527 aa21.34■■□□□ 1.01
PMS1-213ENST00000441310 CARD14Q9BXL6 1004 aa21.34■■□□□ 1.01
PMS1-213ENST00000441310 BLMP54132 1417 aaPredicted RBP21.33■■□□□ 1.01
PMS1-213ENST00000441310 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
PMS1-213ENST00000441310 C14orf93Q9H972 538 aaKnown RBP21.33■■□□□ 1.01
PMS1-213ENST00000441310 TPM2P07951 284 aa21.33■■□□□ 1
PMS1-213ENST00000441310 LMTK2Q8IWU2 1503 aa21.32■■□□□ 1
PMS1-213ENST00000441310 RBM10P98175 930 aaKnown RBP21.32■■□□□ 1
PMS1-213ENST00000441310 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 1
PMS1-213ENST00000441310 TSPOAP1O95153 1857 aa21.31■■□□□ 1
PMS1-213ENST00000441310 UPF2Q9HAU5 1272 aaKnown RBP21.31■■□□□ 1
PMS1-213ENST00000441310 MYOM2P54296 1465 aa21.3■■□□□ 1
PMS1-213ENST00000441310 CCDC146Q8IYE0 955 aa21.3■■□□□ 1
PMS1-213ENST00000441310 ZMYM4Q5VZL5 1548 aa21.3■■□□□ 1
PMS1-213ENST00000441310 DIP2CQ9Y2E4 1556 aa21.3■■□□□ 1
PMS1-213ENST00000441310 KIAA1211Q6ZU35 1233 aa21.29■■□□□ 1
PMS1-213ENST00000441310 ERVK-7P63135 1459 aa21.29■■□□□ 1
PMS1-213ENST00000441310 PLEKHH1Q9ULM0 1364 aa21.29■■□□□ 1
PMS1-213ENST00000441310 STAG3Q9UJ98 1225 aa21.29■■□□□ 1
PMS1-213ENST00000441310 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
PMS1-213ENST00000441310 GOLGA2Q08379 1002 aa21.27■■□□□ 1
PMS1-213ENST00000441310 ADGRB3O60242 1522 aa21.27■■□□□ 1
PMS1-213ENST00000441310 BCAR3O75815 825 aa21.27■■□□□ 1
PMS1-213ENST00000441310 CALD1Q05682 793 aaKnown RBP21.27■□□□□ 0.99
PMS1-213ENST00000441310 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
PMS1-213ENST00000441310 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
PMS1-213ENST00000441310 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
PMS1-213ENST00000441310 PRDM4Q9UKN5 801 aa21.26■□□□□ 0.99
PMS1-213ENST00000441310 NLRP1Q9C000 1473 aa21.25■□□□□ 0.99
PMS1-213ENST00000441310 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
PMS1-213ENST00000441310 PIK3C2GO75747 1445 aa21.24■□□□□ 0.99
PMS1-213ENST00000441310 SIGLEC1Q9BZZ2 1709 aa21.24■□□□□ 0.99
PMS1-213ENST00000441310 TBC1D32Q96NH3 1257 aa21.24■□□□□ 0.99
PMS1-213ENST00000441310 CABP2Q9NPB3 220 aa21.23■□□□□ 0.99
PMS1-213ENST00000441310 RPGRIP1LQ68CZ1 1315 aa21.23■□□□□ 0.99
PMS1-213ENST00000441310 ASXL1Q8IXJ9 1541 aa21.22■□□□□ 0.99
PMS1-213ENST00000441310 RICTORQ6R327 1708 aa21.22■□□□□ 0.99
PMS1-213ENST00000441310 VIRMAQ69YN4 1812 aaKnown RBP21.22■□□□□ 0.99
PMS1-213ENST00000441310 CHMP5Q9NZZ3 219 aa21.22■□□□□ 0.99
PMS1-213ENST00000441310 CAMSAP1Q5T5Y3 1602 aa21.22■□□□□ 0.99
PMS1-213ENST00000441310 ARID3AQ99856 593 aa21.21■□□□□ 0.99
PMS1-213ENST00000441310 NRXN1Q9ULB1 1477 aa21.21■□□□□ 0.99
PMS1-213ENST00000441310 SLC52A1Q9NWF4 448 aa21.2■□□□□ 0.98
PMS1-213ENST00000441310 SYNMO15061 1565 aa21.2■□□□□ 0.98
PMS1-213ENST00000441310 IFT172Q9UG01 1749 aa21.19■□□□□ 0.98
PMS1-213ENST00000441310 KIAA1210Q9ULL0 1709 aa21.19■□□□□ 0.98
PMS1-213ENST00000441310 GAS2L3Q86XJ1 694 aa21.19■□□□□ 0.98
PMS1-213ENST00000441310 KDM5AP29375 1690 aaKnown RBP21.18■□□□□ 0.98
PMS1-213ENST00000441310 SLC24A1O60721 1099 aa21.18■□□□□ 0.98
PMS1-213ENST00000441310 MORC1Q86VD1 984 aa21.18■□□□□ 0.98
PMS1-213ENST00000441310 FAM13BQ9NYF5 915 aa21.18■□□□□ 0.98
PMS1-213ENST00000441310 COG6Q9Y2V7 657 aa21.18■□□□□ 0.98
PMS1-213ENST00000441310 MINK1Q8N4C8 1332 aaPredicted RBP21.18■□□□□ 0.98
PMS1-213ENST00000441310 APAF1O14727 1248 aa21.17■□□□□ 0.98
PMS1-213ENST00000441310 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
PMS1-213ENST00000441310 MYOM1P52179 1685 aa21.17■□□□□ 0.98
PMS1-213ENST00000441310 SLFN5Q08AF3 891 aa21.17■□□□□ 0.98
PMS1-213ENST00000441310 NEURL4Q96JN8 1562 aa21.17■□□□□ 0.98
PMS1-213ENST00000441310 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
PMS1-213ENST00000441310 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
PMS1-213ENST00000441310 PANK1Q8TE04 598 aa21.16■□□□□ 0.98
PMS1-213ENST00000441310 NSD3Q9BZ95 1437 aa21.16■□□□□ 0.98
PMS1-213ENST00000441310 PPLO60437 1756 aa21.16■□□□□ 0.98
PMS1-213ENST00000441310 INSRP06213 1382 aa21.16■□□□□ 0.98
PMS1-213ENST00000441310 AAMPQ13685 434 aa21.16■□□□□ 0.98
PMS1-213ENST00000441310 CLUAP1Q96AJ1 413 aa21.16■□□□□ 0.98
PMS1-213ENST00000441310 DDX11L8A8MPP1 907 aa21.14■□□□□ 0.98
PMS1-213ENST00000441310 RIPK4P57078 832 aa21.14■□□□□ 0.97
PMS1-213ENST00000441310 NEUROD2Q15784 382 aa21.14■□□□□ 0.97
PMS1-213ENST00000441310 ADGRB1O14514 1584 aa21.14■□□□□ 0.97
PMS1-213ENST00000441310 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
PMS1-213ENST00000441310 ZNF521Q96K83 1311 aa21.13■□□□□ 0.97
PMS1-213ENST00000441310 PRAM1Q96QH2 718 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms