RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 SIRT1Q96EB6 747 aa28.53■■■□□ 2.16
ARPC4-204ENST00000440787 NHSL1Q5SYE7 1610 aa28.52■■■□□ 2.16
ARPC4-204ENST00000440787 KIAA1210Q9ULL0 1709 aa28.51■■■□□ 2.15
ARPC4-204ENST00000440787 SIN3AQ96ST3 1273 aa28.49■■■□□ 2.15
ARPC4-204ENST00000440787 FMN2Q9NZ56 1722 aa28.46■■■□□ 2.15
ARPC4-204ENST00000440787 PRAM1Q96QH2 718 aa28.45■■■□□ 2.14
ARPC4-204ENST00000440787 JCADQ9P266 1359 aa28.45■■■□□ 2.14
ARPC4-204ENST00000440787 NEUROD1Q13562 356 aa28.43■■■□□ 2.14
ARPC4-204ENST00000440787 TRAK1Q9UPV9 953 aa28.43■■■□□ 2.14
ARPC4-204ENST00000440787 L3MBTL2Q969R5 705 aa28.42■■■□□ 2.14
ARPC4-204ENST00000440787 ARHGEF28Q8N1W1 1705 aaKnown RBP28.42■■■□□ 2.14
ARPC4-204ENST00000440787 SHPRHQ149N8 1683 aa28.42■■■□□ 2.14
ARPC4-204ENST00000440787 POGKQ9P215 609 aa28.41■■■□□ 2.14
ARPC4-204ENST00000440787 SAFB2Q14151 953 aaKnown RBP eCLIP28.4■■■□□ 2.14
ARPC4-204ENST00000440787 ORAI2Q96SN7 254 aa28.4■■■□□ 2.14
ARPC4-204ENST00000440787 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
ARPC4-204ENST00000440787 DDX17Q92841 729 aaKnown RBP28.36■■■□□ 2.13
ARPC4-204ENST00000440787 NUTM2FA1L443 756 aa28.35■■■□□ 2.13
ARPC4-204ENST00000440787 ESCO1Q5FWF5 840 aa28.34■■■□□ 2.13
ARPC4-204ENST00000440787 PHF23Q9BUL5 403 aaPredicted RBP28.34■■■□□ 2.13
ARPC4-204ENST00000440787 KIF1AQ12756 1690 aa28.33■■■□□ 2.13
ARPC4-204ENST00000440787 TRPM1Q7Z4N2 1603 aa28.32■■■□□ 2.12
ARPC4-204ENST00000440787 RGPD8O14715 1765 aaPredicted RBP28.32■■■□□ 2.12
ARPC4-204ENST00000440787 NBPF1Q3BBV0 1214 aa28.31■■■□□ 2.12
ARPC4-204ENST00000440787 LRRC59Q96AG4 307 aaKnown RBP28.31■■■□□ 2.12
ARPC4-204ENST00000440787 SPATA31A6Q5VVP1 1343 aa28.31■■■□□ 2.12
ARPC4-204ENST00000440787 SOS2Q07890 1332 aaPredicted RBP28.29■■■□□ 2.12
ARPC4-204ENST00000440787 MINK1Q8N4C8 1332 aaPredicted RBP28.29■■■□□ 2.12
ARPC4-204ENST00000440787 USP32Q8NFA0 1604 aa28.29■■■□□ 2.12
ARPC4-204ENST00000440787 NPHP3Q7Z494 1330 aa28.28■■■□□ 2.12
ARPC4-204ENST00000440787 ANKARQ7Z5J8 1434 aa28.27■■■□□ 2.12
ARPC4-204ENST00000440787 ILDR2Q71H61 639 aa28.27■■■□□ 2.12
ARPC4-204ENST00000440787 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
ARPC4-204ENST00000440787 LRP6O75581 1613 aa28.27■■■□□ 2.12
ARPC4-204ENST00000440787 PXDNQ92626 1479 aa28.26■■■□□ 2.11
ARPC4-204ENST00000440787 PNPLA6Q8IY17 1366 aa28.25■■■□□ 2.11
ARPC4-204ENST00000440787 TONSLQ96HA7 1378 aa28.25■■■□□ 2.11
ARPC4-204ENST00000440787 EIF3AQ14152 1382 aaKnown RBP28.24■■■□□ 2.11
ARPC4-204ENST00000440787 TULP4Q9NRJ4 1543 aa28.24■■■□□ 2.11
ARPC4-204ENST00000440787 PCGF6Q9BYE7 350 aa28.24■■■□□ 2.11
ARPC4-204ENST00000440787 FOXO3O43524 673 aa28.23■■■□□ 2.11
ARPC4-204ENST00000440787 WASLO00401 505 aaPredicted RBP28.21■■■□□ 2.11
ARPC4-204ENST00000440787 PHF8Q9UPP1 1060 aa28.2■■■□□ 2.1
ARPC4-204ENST00000440787 ROCK2O75116 1388 aaKnown RBP28.19■■■□□ 2.1
ARPC4-204ENST00000440787 COL22A1Q8NFW1 1626 aaPredicted RBP28.18■■■□□ 2.1
ARPC4-204ENST00000440787 XPCQ01831 940 aaPredicted RBP28.18■■■□□ 2.1
ARPC4-204ENST00000440787 QRICH2Q9H0J4 1663 aa28.18■■■□□ 2.1
ARPC4-204ENST00000440787 RGS17Q9UGC6 210 aaPredicted RBP28.17■■■□□ 2.1
ARPC4-204ENST00000440787 ITSN1Q15811 1721 aa28.17■■■□□ 2.1
ARPC4-204ENST00000440787 NUTM2BA6NNL0 878 aaPredicted RBP28.16■■■□□ 2.1
ARPC4-204ENST00000440787 NUTM2EB1AL46 878 aaPredicted RBP28.16■■■□□ 2.1
ARPC4-204ENST00000440787 NBPF8Q3BBV2 869 aa28.16■■■□□ 2.1
ARPC4-204ENST00000440787 MEX3CQ5U5Q3 659 aaKnown RBP28.16■■■□□ 2.1
ARPC4-204ENST00000440787 NUTM2AQ8IVF1 878 aaPredicted RBP28.16■■■□□ 2.1
ARPC4-204ENST00000440787 PRR36Q9H6K5 1346 aa28.16■■■□□ 2.1
ARPC4-204ENST00000440787 CENPJQ9HC77 1338 aaPredicted RBP28.16■■■□□ 2.1
ARPC4-204ENST00000440787 ATP7BP35670 1465 aa28.15■■■□□ 2.1
ARPC4-204ENST00000440787 GPRASP1Q5JY77 1395 aa28.12■■■□□ 2.09
ARPC4-204ENST00000440787 RALGAPBQ86X10 1494 aa28.11■■■□□ 2.09
ARPC4-204ENST00000440787 TOPAZ1Q8N9V7 1692 aa28.1■■■□□ 2.09
ARPC4-204ENST00000440787 KRT28Q7Z3Y7 464 aa28.1■■■□□ 2.09
ARPC4-204ENST00000440787 PMFBP1Q8TBY8 1022 aa28.1■■■□□ 2.09
ARPC4-204ENST00000440787 CDK19Q9BWU1 502 aa28.09■■■□□ 2.09
ARPC4-204ENST00000440787 SPATA31A3Q5VYP0 1347 aa28.08■■■□□ 2.09
ARPC4-204ENST00000440787 TNS3Q68CZ2 1445 aa28.08■■■□□ 2.09
ARPC4-204ENST00000440787 PSME1Q06323 249 aa28.07■■■□□ 2.08
ARPC4-204ENST00000440787 NUDT16Q96DE0 195 aaKnown RBP28.07■■■□□ 2.08
ARPC4-204ENST00000440787 TRPM3Q9HCF6 1732 aaPredicted RBP28.06■■■□□ 2.08
ARPC4-204ENST00000440787 SBNO1A3KN83 1393 aa28.05■■■□□ 2.08
ARPC4-204ENST00000440787 CLSPNQ9HAW4 1339 aa28.05■■■□□ 2.08
ARPC4-204ENST00000440787 POTEAQ6S8J7 498 aa28.04■■■□□ 2.08
ARPC4-204ENST00000440787 MARF1Q9Y4F3 1742 aaKnown RBP28.01■■■□□ 2.07
ARPC4-204ENST00000440787 ADAMTS2O95450 1211 aa28.01■■■□□ 2.07
ARPC4-204ENST00000440787 CARD11Q9BXL7 1154 aa28.01■■■□□ 2.07
ARPC4-204ENST00000440787 SRPK2P78362 688 aaKnown RBP28■■■□□ 2.07
ARPC4-204ENST00000440787 ZNF772Q68DY9 489 aaPredicted RBP28■■■□□ 2.07
ARPC4-204ENST00000440787 NGDNQ8NEJ9 315 aaKnown RBP28■■■□□ 2.07
ARPC4-204ENST00000440787 C8orf37Q96NL8 207 aa28■■■□□ 2.07
ARPC4-204ENST00000440787 AFF2P51816 1311 aa27.99■■■□□ 2.07
ARPC4-204ENST00000440787 CCDC61Q9Y6R9 512 aa27.99■■■□□ 2.07
ARPC4-204ENST00000440787 ALS2Q96Q42 1657 aa27.99■■■□□ 2.07
ARPC4-204ENST00000440787 ARHGEF10O15013 1369 aa27.99■■■□□ 2.07
ARPC4-204ENST00000440787 SOCS7O14512 581 aa27.98■■■□□ 2.07
ARPC4-204ENST00000440787 ABCA3Q99758 1704 aa27.97■■■□□ 2.07
ARPC4-204ENST00000440787 CABP2Q9NPB3 220 aa27.96■■■□□ 2.07
ARPC4-204ENST00000440787 POLR3AO14802 1390 aaPredicted RBP27.96■■■□□ 2.07
ARPC4-204ENST00000440787 EVC2Q86UK5 1308 aa27.95■■■□□ 2.07
ARPC4-204ENST00000440787 PPIP5K1Q6PFW1 1433 aa27.94■■■□□ 2.06
ARPC4-204ENST00000440787 LMOD2Q6P5Q4 547 aa27.94■■■□□ 2.06
ARPC4-204ENST00000440787 NGLY1Q96IV0 654 aa27.94■■■□□ 2.06
ARPC4-204ENST00000440787 SBNO2Q9Y2G9 1366 aa27.94■■■□□ 2.06
ARPC4-204ENST00000440787 PLEKHG3A1L390 1219 aa27.93■■■□□ 2.06
ARPC4-204ENST00000440787 TIMELESSQ9UNS1 1208 aa27.92■■■□□ 2.06
ARPC4-204ENST00000440787 ACEP12821 1306 aa27.92■■■□□ 2.06
ARPC4-204ENST00000440787 CCER1Q8TC90 406 aaPredicted RBP27.89■■■□□ 2.06
ARPC4-204ENST00000440787 CRYBG1Q9Y4K1 1723 aa27.87■■■□□ 2.05
ARPC4-204ENST00000440787 PAK3O75914 559 aaPredicted RBP27.87■■■□□ 2.05
ARPC4-204ENST00000440787 HAP1P54257 671 aaPredicted RBP27.87■■■□□ 2.05
ARPC4-204ENST00000440787 CABLES1Q8TDN4 633 aa27.87■■■□□ 2.05
ARPC4-204ENST00000440787 PLEKHG5O94827 1062 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms