RNA–Protein interactions for RNA: ENST00000440383.1

C1orf228-210, Transcript of Uncharacterized protein C1orf228, human

TSL 3

Gene C1orf228, Length 454 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-210	ENST00000440383	CDCA8	Q53HL2	280 aa		13.82	□□□□□ -0.2
C1orf228-210	ENST00000440383	CCDC7	Q96M83	1385 aa		13.82	□□□□□ -0.2
C1orf228-210	ENST00000440383	DISP3	Q9P2K9	1392 aa		13.81	□□□□□ -0.2
C1orf228-210	ENST00000440383	PLEKHH1	Q9ULM0	1364 aa		13.81	□□□□□ -0.2
C1orf228-210	ENST00000440383	NCOA3	Q9Y6Q9	1424 aa		13.81	□□□□□ -0.2
C1orf228-210	ENST00000440383	WAPL	Q7Z5K2	1190 aa		13.8	□□□□□ -0.2
C1orf228-210	ENST00000440383	NALCN	Q8IZF0	1738 aa		13.8	□□□□□ -0.2
C1orf228-210	ENST00000440383	WASHC2A	Q641Q2	1341 aa		13.8	□□□□□ -0.2
C1orf228-210	ENST00000440383	C11orf95	C9JLR9	678 aa	Predicted RBP	13.79	□□□□□ -0.2
C1orf228-210	ENST00000440383	KIF7	Q2M1P5	1343 aa		13.79	□□□□□ -0.2
C1orf228-210	ENST00000440383	EVC2	Q86UK5	1308 aa		13.79	□□□□□ -0.2
C1orf228-210	ENST00000440383	CDC42BPG	Q6DT37	1551 aa		13.79	□□□□□ -0.2
C1orf228-210	ENST00000440383	MYOM1	P52179	1685 aa		13.78	□□□□□ -0.2
C1orf228-210	ENST00000440383	XIRP1	Q702N8	1843 aa	Known RBP	13.77	□□□□□ -0.21
C1orf228-210	ENST00000440383	ADGRL3	Q9HAR2	1447 aa		13.77	□□□□□ -0.21
C1orf228-210	ENST00000440383	FMN2	Q9NZ56	1722 aa		13.76	□□□□□ -0.21
C1orf228-210	ENST00000440383	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.76	□□□□□ -0.21
C1orf228-210	ENST00000440383	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
C1orf228-210	ENST00000440383	ITSN1	Q15811	1721 aa		13.75	□□□□□ -0.21
C1orf228-210	ENST00000440383	LRRC7	Q96NW7	1537 aa		13.74	□□□□□ -0.21
C1orf228-210	ENST00000440383	DCC	P43146	1447 aa		13.74	□□□□□ -0.21
C1orf228-210	ENST00000440383	ATAD2	Q6PL18	1390 aa		13.74	□□□□□ -0.21
C1orf228-210	ENST00000440383	NINL	Q9Y2I6	1382 aa		13.74	□□□□□ -0.21
C1orf228-210	ENST00000440383	WASL	O00401	505 aa	Predicted RBP	13.74	□□□□□ -0.21
C1orf228-210	ENST00000440383	PROSER2	Q86WR7	435 aa	Predicted RBP	13.74	□□□□□ -0.21
C1orf228-210	ENST00000440383	TOPAZ1	Q8N9V7	1692 aa		13.73	□□□□□ -0.21
C1orf228-210	ENST00000440383	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.73	□□□□□ -0.21
C1orf228-210	ENST00000440383	LTBP4	Q8N2S1	1624 aa		13.73	□□□□□ -0.21
C1orf228-210	ENST00000440383	ANKAR	Q7Z5J8	1434 aa		13.73	□□□□□ -0.21
C1orf228-210	ENST00000440383	TMEM94	Q12767	1356 aa		13.72	□□□□□ -0.21
C1orf228-210	ENST00000440383	CDK19	Q9BWU1	502 aa		13.72	□□□□□ -0.21
C1orf228-210	ENST00000440383	ATP7B	P35670	1465 aa		13.72	□□□□□ -0.21
C1orf228-210	ENST00000440383	USP32	Q8NFA0	1604 aa		13.72	□□□□□ -0.21
C1orf228-210	ENST00000440383	SRPK2	P78362	688 aa	Known RBP	13.7	□□□□□ -0.22
C1orf228-210	ENST00000440383	C19orf44	Q9H6X5	657 aa		13.7	□□□□□ -0.22
C1orf228-210	ENST00000440383	RGPD8	O14715	1765 aa	Predicted RBP	13.69	□□□□□ -0.22
C1orf228-210	ENST00000440383	DDX10	Q13206	875 aa	Known RBP	13.68	□□□□□ -0.22
C1orf228-210	ENST00000440383	CABP2	Q9NPB3	220 aa		13.68	□□□□□ -0.22
C1orf228-210	ENST00000440383	MSH6	P52701	1360 aa		13.68	□□□□□ -0.22
C1orf228-210	ENST00000440383	AKAP12	Q02952	1782 aa		13.68	□□□□□ -0.22
C1orf228-210	ENST00000440383	NUDT16	Q96DE0	195 aa	Known RBP	13.67	□□□□□ -0.22
C1orf228-210	ENST00000440383	POLR3GL	Q9BT43	218 aa		13.67	□□□□□ -0.22
C1orf228-210	ENST00000440383	CCDC61	Q9Y6R9	512 aa		13.67	□□□□□ -0.22
C1orf228-210	ENST00000440383	PRR36	Q9H6K5	1346 aa		13.66	□□□□□ -0.22
C1orf228-210	ENST00000440383	ANKRD36B	Q8N2N9	1353 aa		13.66	□□□□□ -0.22
C1orf228-210	ENST00000440383	MON2	Q7Z3U7	1717 aa		13.65	□□□□□ -0.22
C1orf228-210	ENST00000440383	C14orf37	Q86TY3	774 aa		13.65	□□□□□ -0.22
C1orf228-210	ENST00000440383	PPIP5K1	Q6PFW1	1433 aa		13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	KIF1A	Q12756	1690 aa		13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	CD163L1	Q9NR16	1453 aa		13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	CADPS2	Q86UW7	1296 aa		13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	RBM33	Q96EV2	1170 aa	Known RBP	13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	MST1R	Q04912	1400 aa		13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	CPSF1	Q10570	1443 aa	Known RBP	13.64	□□□□□ -0.23
C1orf228-210	ENST00000440383	IQSEC2	Q5JU85	1478 aa		13.63	□□□□□ -0.23
C1orf228-210	ENST00000440383	PLEKHG3	A1L390	1219 aa		13.63	□□□□□ -0.23
C1orf228-210	ENST00000440383	DIEXF	Q68CQ4	756 aa	Known RBP	13.63	□□□□□ -0.23
C1orf228-210	ENST00000440383	SLC12A5	Q9H2X9	1139 aa		13.63	□□□□□ -0.23
C1orf228-210	ENST00000440383	TERF2IP	Q9NYB0	399 aa		13.63	□□□□□ -0.23
C1orf228-210	ENST00000440383	ATF3	P18847	181 aa		13.62	□□□□□ -0.23
C1orf228-210	ENST00000440383	TMC1	Q8TDI8	760 aa		13.62	□□□□□ -0.23
C1orf228-210	ENST00000440383	C1orf167	Q5SNV9	1468 aa		13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383		A0A1W2PP64	1363 aa		13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383	POLR3A	O14802	1390 aa	Predicted RBP	13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383	PER1	O15534	1290 aa	Predicted RBP	13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383	ZNF692	Q9BU19	519 aa	Predicted RBP	13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383	PANK3	Q9H999	370 aa		13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383	CABP1	Q9NZU7	370 aa		13.61	□□□□□ -0.23
C1orf228-210	ENST00000440383	NPC1L1	Q9UHC9	1359 aa		13.6	□□□□□ -0.23
C1orf228-210	ENST00000440383	NRK	Q7Z2Y5	1582 aa		13.6	□□□□□ -0.23
C1orf228-210	ENST00000440383	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.6	□□□□□ -0.23
C1orf228-210	ENST00000440383	BRD4	O60885	1362 aa	Predicted RBP	13.59	□□□□□ -0.23
C1orf228-210	ENST00000440383	ANKRD26	Q9UPS8	1709 aa		13.59	□□□□□ -0.23
C1orf228-210	ENST00000440383	EDC4	Q6P2E9	1401 aa	Known RBP	13.58	□□□□□ -0.24
C1orf228-210	ENST00000440383	NUTM2F	A1L443	756 aa		13.58	□□□□□ -0.24
C1orf228-210	ENST00000440383	ACE	P12821	1306 aa		13.58	□□□□□ -0.24
C1orf228-210	ENST00000440383	KIF20B	Q96Q89	1820 aa		13.57	□□□□□ -0.24
C1orf228-210	ENST00000440383	CARD14	Q9BXL6	1004 aa		13.57	□□□□□ -0.24
C1orf228-210	ENST00000440383	PHF8	Q9UPP1	1060 aa		13.57	□□□□□ -0.24
C1orf228-210	ENST00000440383	KNSTRN	Q9Y448	316 aa		13.57	□□□□□ -0.24
C1orf228-210	ENST00000440383	KTN1	Q86UP2	1357 aa	Known RBP	13.57	□□□□□ -0.24
C1orf228-210	ENST00000440383	USP6	P35125	1406 aa		13.56	□□□□□ -0.24
C1orf228-210	ENST00000440383	NSD3	Q9BZ95	1437 aa		13.56	□□□□□ -0.24
C1orf228-210	ENST00000440383	NSD2	O96028	1365 aa		13.56	□□□□□ -0.24
C1orf228-210	ENST00000440383	SSH2	Q76I76	1423 aa		13.56	□□□□□ -0.24
C1orf228-210	ENST00000440383	ESCO1	Q5FWF5	840 aa		13.55	□□□□□ -0.24
C1orf228-210	ENST00000440383	USP54	Q70EL1	1684 aa		13.55	□□□□□ -0.24
C1orf228-210	ENST00000440383	NHSL1	Q5SYE7	1610 aa		13.54	□□□□□ -0.24
C1orf228-210	ENST00000440383	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.54	□□□□□ -0.24
C1orf228-210	ENST00000440383	NGDN	Q8NEJ9	315 aa	Known RBP	13.54	□□□□□ -0.24
C1orf228-210	ENST00000440383	SLAIN2	Q9P270	581 aa		13.54	□□□□□ -0.24
C1orf228-210	ENST00000440383	CGNL1	Q0VF96	1302 aa		13.54	□□□□□ -0.24
C1orf228-210	ENST00000440383	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.53	□□□□□ -0.24
C1orf228-210	ENST00000440383	PMFBP1	Q8TBY8	1022 aa		13.53	□□□□□ -0.24
C1orf228-210	ENST00000440383	ORAI2	Q96SN7	254 aa		13.53	□□□□□ -0.24
C1orf228-210	ENST00000440383	TTC21A	Q8NDW8	1320 aa		13.53	□□□□□ -0.24
C1orf228-210	ENST00000440383	ANP32C	O43423	234 aa		13.52	□□□□□ -0.25
C1orf228-210	ENST00000440383	PARD3	Q8TEW0	1356 aa		13.51	□□□□□ -0.25
C1orf228-210	ENST00000440383	NPHP3	Q7Z494	1330 aa		13.51	□□□□□ -0.25
C1orf228-210	ENST00000440383	TTC21B	Q7Z4L5	1316 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms