RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 UPF1Q92900 1129 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPA-221ENST00000440346 MPHOSPH9Q99550 1183 aa10.49□□□□□ -0.73
PTPA-221ENST00000440346 PNPLA6Q8IY17 1366 aa10.49□□□□□ -0.73
PTPA-221ENST00000440346 DDX17Q92841 729 aaKnown RBP10.48□□□□□ -0.73
PTPA-221ENST00000440346 LRRC59Q96AG4 307 aaKnown RBP10.48□□□□□ -0.73
PTPA-221ENST00000440346 AFF2P51816 1311 aa10.48□□□□□ -0.73
PTPA-221ENST00000440346 C1orf167Q5SNV9 1468 aa10.48□□□□□ -0.73
PTPA-221ENST00000440346 IFT172Q9UG01 1749 aa10.47□□□□□ -0.73
PTPA-221ENST00000440346 RXRBP28702 533 aa10.47□□□□□ -0.73
PTPA-221ENST00000440346 ROBO2Q9HCK4 1378 aa10.47□□□□□ -0.73
PTPA-221ENST00000440346 COL22A1Q8NFW1 1626 aaPredicted RBP10.46□□□□□ -0.74
PTPA-221ENST00000440346 MARF1Q9Y4F3 1742 aaKnown RBP10.45□□□□□ -0.74
PTPA-221ENST00000440346 RGS12O14924 1447 aa10.45□□□□□ -0.74
PTPA-221ENST00000440346 CDC42BPGQ6DT37 1551 aa10.44□□□□□ -0.74
PTPA-221ENST00000440346 DHX57Q6P158 1386 aaKnown RBP10.44□□□□□ -0.74
PTPA-221ENST00000440346 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
PTPA-221ENST00000440346 VGFO15240 615 aaPredicted RBP10.44□□□□□ -0.74
PTPA-221ENST00000440346 RPGRIP1LQ68CZ1 1315 aa10.43□□□□□ -0.74
PTPA-221ENST00000440346 C8orf37Q96NL8 207 aa10.43□□□□□ -0.74
PTPA-221ENST00000440346 ORAI2Q96SN7 254 aa10.43□□□□□ -0.74
PTPA-221ENST00000440346 KNDC1Q76NI1 1749 aa10.43□□□□□ -0.74
PTPA-221ENST00000440346 RBM6P78332 1123 aaKnown RBP10.42□□□□□ -0.74
PTPA-221ENST00000440346 QTRT2Q9H974 415 aaKnown RBP10.42□□□□□ -0.74
PTPA-221ENST00000440346 CCDC144AA2RUR9 1427 aa10.41□□□□□ -0.74
PTPA-221ENST00000440346 ANKRD30BQ9BXX2 1392 aa10.41□□□□□ -0.74
PTPA-221ENST00000440346 EP400Q96L91 3159 aa10.41□□□□□ -0.74
PTPA-221ENST00000440346 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
PTPA-221ENST00000440346 FMN2Q9NZ56 1722 aa10.4□□□□□ -0.74
PTPA-221ENST00000440346 MYOM2P54296 1465 aa10.4□□□□□ -0.74
PTPA-221ENST00000440346 PXDNQ92626 1479 aa10.4□□□□□ -0.74
PTPA-221ENST00000440346 TECPR2O15040 1411 aa10.4□□□□□ -0.75
PTPA-221ENST00000440346 SPATA31E1Q6ZUB1 1445 aa10.4□□□□□ -0.75
PTPA-221ENST00000440346 RGPD8O14715 1765 aaPredicted RBP10.39□□□□□ -0.75
PTPA-221ENST00000440346 NGLY1Q96IV0 654 aa10.39□□□□□ -0.75
PTPA-221ENST00000440346 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.38□□□□□ -0.75
PTPA-221ENST00000440346 ADGRF5Q8IZF2 1346 aa10.38□□□□□ -0.75
PTPA-221ENST00000440346 CLSPNQ9HAW4 1339 aa10.38□□□□□ -0.75
PTPA-221ENST00000440346 FNBP4Q8N3X1 1017 aaPredicted RBP10.38□□□□□ -0.75
PTPA-221ENST00000440346 ATRNO75882 1429 aa10.38□□□□□ -0.75
PTPA-221ENST00000440346 SRCAPQ6ZRS2 3230 aa10.38□□□□□ -0.75
PTPA-221ENST00000440346 USP21Q9UK80 565 aa10.37□□□□□ -0.75
PTPA-221ENST00000440346 KIF1AQ12756 1690 aa10.37□□□□□ -0.75
PTPA-221ENST00000440346 LRPPRCP42704 1394 aaKnown RBP10.37□□□□□ -0.75
PTPA-221ENST00000440346 NPHP3Q7Z494 1330 aa10.36□□□□□ -0.75
PTPA-221ENST00000440346 PIK3C2GO75747 1445 aa10.36□□□□□ -0.75
PTPA-221ENST00000440346 BCL9LQ86UU0 1499 aa10.36□□□□□ -0.75
PTPA-221ENST00000440346 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 WAPLQ7Z5K2 1190 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 TRPC5Q9UL62 973 aaPredicted RBP10.35□□□□□ -0.75
PTPA-221ENST00000440346 ATAD2Q6PL18 1390 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 ABCC11Q96J66 1382 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 PLEKHH1Q9ULM0 1364 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 KIAA1210Q9ULL0 1709 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 BRWD3Q6RI45 1802 aa10.35□□□□□ -0.75
PTPA-221ENST00000440346 ABCA3Q99758 1704 aa10.34□□□□□ -0.75
PTPA-221ENST00000440346 FOXO3O43524 673 aa10.34□□□□□ -0.75
PTPA-221ENST00000440346 YTHDC2Q9H6S0 1430 aaKnown RBP10.33□□□□□ -0.76
PTPA-221ENST00000440346 XPCQ01831 940 aaPredicted RBP10.33□□□□□ -0.76
PTPA-221ENST00000440346 RGL3Q3MIN7 710 aa10.33□□□□□ -0.76
PTPA-221ENST00000440346 STK26Q9P289 416 aa10.33□□□□□ -0.76
PTPA-221ENST00000440346 NRXN1Q9ULB1 1477 aa10.33□□□□□ -0.76
PTPA-221ENST00000440346 GLI3P10071 1580 aa10.33□□□□□ -0.76
PTPA-221ENST00000440346 USP32Q8NFA0 1604 aa10.33□□□□□ -0.76
PTPA-221ENST00000440346 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
PTPA-221ENST00000440346 PLCH1Q4KWH8 1693 aa10.31□□□□□ -0.76
PTPA-221ENST00000440346 NUTM2FA1L443 756 aa10.31□□□□□ -0.76
PTPA-221ENST00000440346 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
PTPA-221ENST00000440346 SLIT2O94813 1529 aa10.31□□□□□ -0.76
PTPA-221ENST00000440346 SPATA31A3Q5VYP0 1347 aa10.31□□□□□ -0.76
PTPA-221ENST00000440346 NWD2Q9ULI1 1742 aa10.3□□□□□ -0.76
PTPA-221ENST00000440346 CCER1Q8TC90 406 aaPredicted RBP10.29□□□□□ -0.76
PTPA-221ENST00000440346 SIRT1Q96EB6 747 aa10.29□□□□□ -0.76
PTPA-221ENST00000440346 GJD4Q96KN9 370 aaPredicted RBP10.29□□□□□ -0.76
PTPA-221ENST00000440346 C14orf93Q9H972 538 aaKnown RBP10.29□□□□□ -0.76
PTPA-221ENST00000440346 RALGAPBQ86X10 1494 aa10.29□□□□□ -0.76
PTPA-221ENST00000440346 TRPM3Q9HCF6 1732 aaPredicted RBP10.28□□□□□ -0.76
PTPA-221ENST00000440346 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
PTPA-221ENST00000440346 TRPM1Q7Z4N2 1603 aa10.28□□□□□ -0.76
PTPA-221ENST00000440346 DLC1Q96QB1 1528 aa10.28□□□□□ -0.76
PTPA-221ENST00000440346 TNS3Q68CZ2 1445 aa10.27□□□□□ -0.77
PTPA-221ENST00000440346 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
PTPA-221ENST00000440346 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
PTPA-221ENST00000440346 SIN3AQ96ST3 1273 aa10.27□□□□□ -0.77
PTPA-221ENST00000440346 TIMELESSQ9UNS1 1208 aa10.27□□□□□ -0.77
PTPA-221ENST00000440346 NRAPQ86VF7 1730 aa10.27□□□□□ -0.77
PTPA-221ENST00000440346 ADGRB1O14514 1584 aa10.26□□□□□ -0.77
PTPA-221ENST00000440346 ALS2Q96Q42 1657 aa10.26□□□□□ -0.77
PTPA-221ENST00000440346 CFAP70Q5T0N1 1121 aa10.26□□□□□ -0.77
PTPA-221ENST00000440346 PHF8Q9UPP1 1060 aa10.26□□□□□ -0.77
PTPA-221ENST00000440346 U3KPZ7 1027 aaPredicted RBP10.26□□□□□ -0.77
PTPA-221ENST00000440346 CRYBG1Q9Y4K1 1723 aa10.26□□□□□ -0.77
PTPA-221ENST00000440346 TONSLQ96HA7 1378 aa10.26□□□□□ -0.77
PTPA-221ENST00000440346 CCDC125Q86Z20 511 aa10.25□□□□□ -0.77
PTPA-221ENST00000440346 SBNO1A3KN83 1393 aa10.25□□□□□ -0.77
PTPA-221ENST00000440346 CABLES1Q8TDN4 633 aa10.24□□□□□ -0.77
PTPA-221ENST00000440346 PRAM1Q96QH2 718 aa10.24□□□□□ -0.77
PTPA-221ENST00000440346 BLMP54132 1417 aaPredicted RBP10.24□□□□□ -0.77
PTPA-221ENST00000440346 ANKARQ7Z5J8 1434 aa10.24□□□□□ -0.77
PTPA-221ENST00000440346 NEUROD1Q13562 356 aa10.23□□□□□ -0.77
PTPA-221ENST00000440346 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms