RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 CDCA8Q53HL2 280 aa32.39■■■□□ 2.78
LONRF3-204ENST00000439603 DDX10Q13206 875 aaKnown RBP32.38■■■□□ 2.77
LONRF3-204ENST00000439603 MINK1Q8N4C8 1332 aaPredicted RBP32.38■■■□□ 2.77
LONRF3-204ENST00000439603 EVC2Q86UK5 1308 aa32.35■■■□□ 2.77
LONRF3-204ENST00000439603 DIEXFQ68CQ4 756 aaKnown RBP32.32■■■□□ 2.76
LONRF3-204ENST00000439603 NWD1Q149M9 1564 aa32.31■■■□□ 2.76
LONRF3-204ENST00000439603 DMRT2Q9Y5R5 561 aa32.31■■■□□ 2.76
LONRF3-204ENST00000439603 TULP4Q9NRJ4 1543 aa32.3■■■□□ 2.76
LONRF3-204ENST00000439603 AEBP2Q6ZN18 517 aaPredicted RBP32.27■■■□□ 2.76
LONRF3-204ENST00000439603 PUS7Q96PZ0 661 aaKnown RBP32.27■■■□□ 2.76
LONRF3-204ENST00000439603 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.26■■■□□ 2.75
LONRF3-204ENST00000439603 CDK19Q9BWU1 502 aa32.24■■■□□ 2.75
LONRF3-204ENST00000439603 SRPK2P78362 688 aaKnown RBP32.23■■■□□ 2.75
LONRF3-204ENST00000439603 CABP2Q9NPB3 220 aa32.23■■■□□ 2.75
LONRF3-204ENST00000439603 WASLO00401 505 aaPredicted RBP32.23■■■□□ 2.75
LONRF3-204ENST00000439603 NKTRP30414 1462 aaKnown RBP32.22■■■□□ 2.75
LONRF3-204ENST00000439603 ADGRB2O60241 1585 aa32.2■■■□□ 2.75
LONRF3-204ENST00000439603 PROSER2Q86WR7 435 aaPredicted RBP32.19■■■□□ 2.74
LONRF3-204ENST00000439603 STRCP1A6NGW2 1772 aa32.18■■■□□ 2.74
LONRF3-204ENST00000439603 RBM33Q96EV2 1170 aaKnown RBP32.17■■■□□ 2.74
LONRF3-204ENST00000439603 ATAD2Q6PL18 1390 aa32.15■■■□□ 2.74
LONRF3-204ENST00000439603 ZNF335Q9H4Z2 1342 aaPredicted RBP32.13■■■□□ 2.73
LONRF3-204ENST00000439603 MYOM1P52179 1685 aa32.12■■■□□ 2.73
LONRF3-204ENST00000439603 TMC1Q8TDI8 760 aa32.12■■■□□ 2.73
LONRF3-204ENST00000439603 PANK3Q9H999 370 aa32.1■■■□□ 2.73
LONRF3-204ENST00000439603 ADGRL3Q9HAR2 1447 aa32.1■■■□□ 2.73
LONRF3-204ENST00000439603 C14orf37Q86TY3 774 aa32.1■■■□□ 2.73
LONRF3-204ENST00000439603 NALCNQ8IZF0 1738 aa32.09■■■□□ 2.73
LONRF3-204ENST00000439603 SLC12A5Q9H2X9 1139 aa32.09■■■□□ 2.73
LONRF3-204ENST00000439603 TMEM94Q12767 1356 aa32.08■■■□□ 2.73
LONRF3-204ENST00000439603 NUDT16Q96DE0 195 aaKnown RBP32.08■■■□□ 2.73
LONRF3-204ENST00000439603 NINLQ9Y2I6 1382 aa32.07■■■□□ 2.72
LONRF3-204ENST00000439603 NCOA3Q9Y6Q9 1424 aa32.06■■■□□ 2.72
LONRF3-204ENST00000439603 CCDC61Q9Y6R9 512 aa32.04■■■□□ 2.72
LONRF3-204ENST00000439603 CDC42BPGQ6DT37 1551 aa32.04■■■□□ 2.72
LONRF3-204ENST00000439603 PRR36Q9H6K5 1346 aa32.04■■■□□ 2.72
LONRF3-204ENST00000439603 ATP7BP35670 1465 aa32.02■■■□□ 2.72
LONRF3-204ENST00000439603 NUTM2FA1L443 756 aa32.02■■■□□ 2.72
LONRF3-204ENST00000439603 CABP1Q9NZU7 370 aa32.02■■■□□ 2.72
LONRF3-204ENST00000439603 C19orf44Q9H6X5 657 aa32.01■■■□□ 2.72
LONRF3-204ENST00000439603 PER1O15534 1290 aaPredicted RBP32.01■■■□□ 2.71
LONRF3-204ENST00000439603 LRRC7Q96NW7 1537 aa32■■■□□ 2.71
LONRF3-204ENST00000439603 FMN2Q9NZ56 1722 aa31.99■■■□□ 2.71
LONRF3-204ENST00000439603 PPIP5K1Q6PFW1 1433 aa31.98■■■□□ 2.71
LONRF3-204ENST00000439603 ANKRD36BQ8N2N9 1353 aa31.98■■■□□ 2.71
LONRF3-204ENST00000439603 ANKARQ7Z5J8 1434 aa31.97■■■□□ 2.71
LONRF3-204ENST00000439603 USP32Q8NFA0 1604 aa31.96■■■□□ 2.71
LONRF3-204ENST00000439603 TERF2IPQ9NYB0 399 aa31.95■■■□□ 2.71
LONRF3-204ENST00000439603 CARD14Q9BXL6 1004 aa31.95■■■□□ 2.7
LONRF3-204ENST00000439603 ANP32CO43423 234 aa31.94■■■□□ 2.7
LONRF3-204ENST00000439603 KNSTRNQ9Y448 316 aa31.93■■■□□ 2.7
LONRF3-204ENST00000439603 XIRP1Q702N8 1843 aaKnown RBP31.92■■■□□ 2.7
LONRF3-204ENST00000439603 CD163L1Q9NR16 1453 aa31.92■■■□□ 2.7
LONRF3-204ENST00000439603 TOPAZ1Q8N9V7 1692 aa31.92■■■□□ 2.7
LONRF3-204ENST00000439603 HDGFL2Q7Z4V5 671 aaPredicted RBP31.92■■■□□ 2.7
LONRF3-204ENST00000439603 A0A1W2PP64 1363 aa31.92■■■□□ 2.7
LONRF3-204ENST00000439603 MIER1Q8N108 512 aa31.91■■■□□ 2.7
LONRF3-204ENST00000439603 MSH6P52701 1360 aa31.91■■■□□ 2.7
LONRF3-204ENST00000439603 DCCP43146 1447 aa31.91■■■□□ 2.7
LONRF3-204ENST00000439603 PLEKHG3A1L390 1219 aa31.91■■■□□ 2.7
LONRF3-204ENST00000439603 ATF3P18847 181 aa31.9■■■□□ 2.7
LONRF3-204ENST00000439603 RGPD8O14715 1765 aaPredicted RBP31.89■■■□□ 2.69
LONRF3-204ENST00000439603 ITSN1Q15811 1721 aa31.88■■■□□ 2.69
LONRF3-204ENST00000439603 CPSF1Q10570 1443 aaKnown RBP31.87■■■□□ 2.69
LONRF3-204ENST00000439603 CADPS2Q86UW7 1296 aa31.86■■■□□ 2.69
LONRF3-204ENST00000439603 NSD3Q9BZ95 1437 aa31.86■■■□□ 2.69
LONRF3-204ENST00000439603 LTBP4Q8N2S1 1624 aa31.85■■■□□ 2.69
LONRF3-204ENST00000439603 CNGB1Q14028 1251 aaPredicted RBP31.84■■■□□ 2.69
LONRF3-204ENST00000439603 AMER1Q5JTC6 1135 aaPredicted RBP31.84■■■□□ 2.69
LONRF3-204ENST00000439603 PMFBP1Q8TBY8 1022 aa31.84■■■□□ 2.69
LONRF3-204ENST00000439603 ZNF692Q9BU19 519 aaPredicted RBP31.84■■■□□ 2.69
LONRF3-204ENST00000439603 ACEP12821 1306 aa31.83■■■□□ 2.69
LONRF3-204ENST00000439603 PRKRIP1Q9H875 184 aaPredicted RBP31.83■■■□□ 2.69
LONRF3-204ENST00000439603 KTN1Q86UP2 1357 aaKnown RBP31.82■■■□□ 2.68
LONRF3-204ENST00000439603 ESCO1Q5FWF5 840 aa31.81■■■□□ 2.68
LONRF3-204ENST00000439603 CC2D1BQ5T0F9 858 aaKnown RBP31.8■■■□□ 2.68
LONRF3-204ENST00000439603 PHF8Q9UPP1 1060 aa31.8■■■□□ 2.68
LONRF3-204ENST00000439603 MST1RQ04912 1400 aa31.8■■■□□ 2.68
LONRF3-204ENST00000439603 C1orf167Q5SNV9 1468 aa31.8■■■□□ 2.68
LONRF3-204ENST00000439603 NGDNQ8NEJ9 315 aaKnown RBP31.8■■■□□ 2.68
LONRF3-204ENST00000439603 POLR3AO14802 1390 aaPredicted RBP31.79■■■□□ 2.68
LONRF3-204ENST00000439603 NPC1L1Q9UHC9 1359 aa31.79■■■□□ 2.68
LONRF3-204ENST00000439603 CGNL1Q0VF96 1302 aa31.78■■■□□ 2.68
LONRF3-204ENST00000439603 AKAP12Q02952 1782 aa31.78■■■□□ 2.68
LONRF3-204ENST00000439603 ORAI2Q96SN7 254 aa31.77■■■□□ 2.68
LONRF3-204ENST00000439603 EDC4Q6P2E9 1401 aaKnown RBP31.75■■■□□ 2.67
LONRF3-204ENST00000439603 MON2Q7Z3U7 1717 aa31.74■■■□□ 2.67
LONRF3-204ENST00000439603 RALBP1Q15311 655 aa31.74■■■□□ 2.67
LONRF3-204ENST00000439603 USP6P35125 1406 aa31.72■■■□□ 2.67
LONRF3-204ENST00000439603 PARD3Q8TEW0 1356 aa31.71■■■□□ 2.67
LONRF3-204ENST00000439603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.7■■■□□ 2.67
LONRF3-204ENST00000439603 NSD2O96028 1365 aa31.69■■■□□ 2.66
LONRF3-204ENST00000439603 SLAIN2Q9P270 581 aa31.69■■■□□ 2.66
LONRF3-204ENST00000439603 FYB1O15117 783 aa31.68■■■□□ 2.66
LONRF3-204ENST00000439603 TTC21BQ7Z4L5 1316 aa31.66■■■□□ 2.66
LONRF3-204ENST00000439603 SSH2Q76I76 1423 aa31.66■■■□□ 2.66
LONRF3-204ENST00000439603 KIF1AQ12756 1690 aa31.66■■■□□ 2.66
LONRF3-204ENST00000439603 FOXO3O43524 673 aa31.65■■■□□ 2.66
LONRF3-204ENST00000439603 GGNBP2Q9H3C7 697 aa31.65■■■□□ 2.66
LONRF3-204ENST00000439603 NRKQ7Z2Y5 1582 aa31.65■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms