RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 NPHP3Q7Z494 1330 aa11.99□□□□□ -0.49
LINC00578-201ENST00000439009 NAIPQ13075 1403 aa11.99□□□□□ -0.49
LINC00578-201ENST00000439009 BCL9LQ86UU0 1499 aa11.99□□□□□ -0.49
LINC00578-201ENST00000439009 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
LINC00578-201ENST00000439009 COL22A1Q8NFW1 1626 aaPredicted RBP11.97□□□□□ -0.49
LINC00578-201ENST00000439009 PXDNQ92626 1479 aa11.96□□□□□ -0.49
LINC00578-201ENST00000439009 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.49
LINC00578-201ENST00000439009 GJD4Q96KN9 370 aaPredicted RBP11.96□□□□□ -0.49
LINC00578-201ENST00000439009 RRBP1Q9P2E9 1410 aaKnown RBP11.95□□□□□ -0.5
LINC00578-201ENST00000439009 LRPPRCP42704 1394 aaKnown RBP11.95□□□□□ -0.5
LINC00578-201ENST00000439009 FOXO3O43524 673 aa11.95□□□□□ -0.5
LINC00578-201ENST00000439009 TECPR2O15040 1411 aa11.94□□□□□ -0.5
LINC00578-201ENST00000439009 EP400Q96L91 3159 aa11.94□□□□□ -0.5
LINC00578-201ENST00000439009 ABCC11Q96J66 1382 aa11.93□□□□□ -0.5
LINC00578-201ENST00000439009 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
LINC00578-201ENST00000439009 PPARGC1BQ86YN6 1023 aaKnown RBP11.93□□□□□ -0.5
LINC00578-201ENST00000439009 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
LINC00578-201ENST00000439009 SPATA31A3Q5VYP0 1347 aa11.92□□□□□ -0.5
LINC00578-201ENST00000439009 ADGRF5Q8IZF2 1346 aa11.92□□□□□ -0.5
LINC00578-201ENST00000439009 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
LINC00578-201ENST00000439009 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
LINC00578-201ENST00000439009 KIF1BO60333 1816 aa11.92□□□□□ -0.5
LINC00578-201ENST00000439009 SLIT2O94813 1529 aa11.91□□□□□ -0.5
LINC00578-201ENST00000439009 ONECUT3O60422 494 aaPredicted RBP11.91□□□□□ -0.5
LINC00578-201ENST00000439009 XPCQ01831 940 aaPredicted RBP11.91□□□□□ -0.5
LINC00578-201ENST00000439009 WAPLQ7Z5K2 1190 aa11.91□□□□□ -0.5
LINC00578-201ENST00000439009 ANKRD30BQ9BXX2 1392 aa11.9□□□□□ -0.5
LINC00578-201ENST00000439009 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
LINC00578-201ENST00000439009 SPATA31E1Q6ZUB1 1445 aa11.89□□□□□ -0.51
LINC00578-201ENST00000439009 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
LINC00578-201ENST00000439009 KRT28Q7Z3Y7 464 aa11.88□□□□□ -0.51
LINC00578-201ENST00000439009 STK26Q9P289 416 aa11.88□□□□□ -0.51
LINC00578-201ENST00000439009 PLEKHH1Q9ULM0 1364 aa11.88□□□□□ -0.51
LINC00578-201ENST00000439009 PPLO60437 1756 aa11.87□□□□□ -0.51
LINC00578-201ENST00000439009 CCDC144AA2RUR9 1427 aa11.87□□□□□ -0.51
LINC00578-201ENST00000439009 VPS72Q15906 364 aa11.87□□□□□ -0.51
LINC00578-201ENST00000439009 TMEM132EQ6IEE7 984 aa11.87□□□□□ -0.51
LINC00578-201ENST00000439009 NUTM2FA1L443 756 aa11.86□□□□□ -0.51
LINC00578-201ENST00000439009 SEPT12Q8IYM1 358 aa11.86□□□□□ -0.51
LINC00578-201ENST00000439009 GLI3P10071 1580 aa11.86□□□□□ -0.51
LINC00578-201ENST00000439009 PIK3C2GO75747 1445 aa11.86□□□□□ -0.51
LINC00578-201ENST00000439009 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
LINC00578-201ENST00000439009 PSME1Q06323 249 aa11.85□□□□□ -0.51
LINC00578-201ENST00000439009 RGL3Q3MIN7 710 aa11.85□□□□□ -0.51
LINC00578-201ENST00000439009 C14orf93Q9H972 538 aaKnown RBP11.85□□□□□ -0.51
LINC00578-201ENST00000439009 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.85□□□□□ -0.51
LINC00578-201ENST00000439009 YTHDC2Q9H6S0 1430 aaKnown RBP11.85□□□□□ -0.51
LINC00578-201ENST00000439009 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
LINC00578-201ENST00000439009 MARF1Q9Y4F3 1742 aaKnown RBP11.83□□□□□ -0.52
LINC00578-201ENST00000439009 DEFB132Q7Z7B7 95 aa11.83□□□□□ -0.52
LINC00578-201ENST00000439009 MPHOSPH9Q99550 1183 aa11.83□□□□□ -0.52
LINC00578-201ENST00000439009 TNS3Q68CZ2 1445 aa11.83□□□□□ -0.52
LINC00578-201ENST00000439009 KRT27Q7Z3Y8 459 aa11.82□□□□□ -0.52
LINC00578-201ENST00000439009 CABLES1Q8TDN4 633 aa11.82□□□□□ -0.52
LINC00578-201ENST00000439009 ARHGEF10O15013 1369 aa11.81□□□□□ -0.52
LINC00578-201ENST00000439009 FAM83GA6ND36 823 aa11.81□□□□□ -0.52
LINC00578-201ENST00000439009 SF3B2Q13435 895 aaKnown RBP11.81□□□□□ -0.52
LINC00578-201ENST00000439009 USP32Q8NFA0 1604 aa11.81□□□□□ -0.52
LINC00578-201ENST00000439009 NRXN1Q9ULB1 1477 aa11.81□□□□□ -0.52
LINC00578-201ENST00000439009 KIF1AQ12756 1690 aa11.81□□□□□ -0.52
LINC00578-201ENST00000439009 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
LINC00578-201ENST00000439009 KNDC1Q76NI1 1749 aa11.8□□□□□ -0.52
LINC00578-201ENST00000439009 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
LINC00578-201ENST00000439009 HAP1P54257 671 aaPredicted RBP11.79□□□□□ -0.52
LINC00578-201ENST00000439009 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
LINC00578-201ENST00000439009 CFAP70Q5T0N1 1121 aa11.78□□□□□ -0.52
LINC00578-201ENST00000439009 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
LINC00578-201ENST00000439009 ANKARQ7Z5J8 1434 aa11.77□□□□□ -0.52
LINC00578-201ENST00000439009 IFT172Q9UG01 1749 aa11.77□□□□□ -0.53
LINC00578-201ENST00000439009 HRCP23327 699 aa11.76□□□□□ -0.53
LINC00578-201ENST00000439009 BAG6P46379 1132 aa11.76□□□□□ -0.53
LINC00578-201ENST00000439009 CCDC9Q9Y3X0 531 aaKnown RBP11.76□□□□□ -0.53
LINC00578-201ENST00000439009 DLC1Q96QB1 1528 aa11.76□□□□□ -0.53
LINC00578-201ENST00000439009 NWD2Q9ULI1 1742 aa11.75□□□□□ -0.53
LINC00578-201ENST00000439009 FAM98CQ17RN3 349 aaKnown RBP11.75□□□□□ -0.53
LINC00578-201ENST00000439009 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
LINC00578-201ENST00000439009 BTG4Q9NY30 223 aa11.75□□□□□ -0.53
LINC00578-201ENST00000439009 LRP5O75197 1615 aa11.75□□□□□ -0.53
LINC00578-201ENST00000439009 PMFBP1Q8TBY8 1022 aa11.74□□□□□ -0.53
LINC00578-201ENST00000439009 SPATA31A5Q5VU36 1347 aa11.74□□□□□ -0.53
LINC00578-201ENST00000439009 SPATA31A7Q8IWB4 1347 aa11.74□□□□□ -0.53
LINC00578-201ENST00000439009 BRWD3Q6RI45 1802 aa11.74□□□□□ -0.53
LINC00578-201ENST00000439009 DISP2A7MBM2 1401 aa11.73□□□□□ -0.53
LINC00578-201ENST00000439009 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC00578-201ENST00000439009 POGKQ9P215 609 aa11.73□□□□□ -0.53
LINC00578-201ENST00000439009 GPRASP1Q5JY77 1395 aa11.72□□□□□ -0.53
LINC00578-201ENST00000439009 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
LINC00578-201ENST00000439009 PLCH1Q4KWH8 1693 aa11.71□□□□□ -0.53
LINC00578-201ENST00000439009 EIF3AQ14152 1382 aaKnown RBP11.71□□□□□ -0.53
LINC00578-201ENST00000439009 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
LINC00578-201ENST00000439009 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.53
LINC00578-201ENST00000439009 ADGRB1O14514 1584 aa11.71□□□□□ -0.54
LINC00578-201ENST00000439009 ADGRB2O60241 1585 aa11.71□□□□□ -0.54
LINC00578-201ENST00000439009 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
LINC00578-201ENST00000439009 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
LINC00578-201ENST00000439009 STAC3Q96MF2 364 aa11.7□□□□□ -0.54
LINC00578-201ENST00000439009 ABCA3Q99758 1704 aa11.69□□□□□ -0.54
LINC00578-201ENST00000439009 A0A0G2JS52 829 aa11.69□□□□□ -0.54
LINC00578-201ENST00000439009 MYT1Q01538 1121 aa11.69□□□□□ -0.54
LINC00578-201ENST00000439009 CAMKK2Q96RR4 588 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms