RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 JCADQ9P266 1359 aa35.8■■■■□ 3.32
RAPGEF1-206ENST00000438647 DLC1Q96QB1 1528 aa35.79■■■■□ 3.32
RAPGEF1-206ENST00000438647 PRAM1Q96QH2 718 aa35.75■■■■□ 3.31
RAPGEF1-206ENST00000438647 POGKQ9P215 609 aa35.74■■■■□ 3.31
RAPGEF1-206ENST00000438647 NHSL1Q5SYE7 1610 aa35.73■■■■□ 3.31
RAPGEF1-206ENST00000438647 SIN3AQ96ST3 1273 aa35.73■■■■□ 3.31
RAPGEF1-206ENST00000438647 PHF23Q9BUL5 403 aaPredicted RBP35.73■■■■□ 3.31
RAPGEF1-206ENST00000438647 TRAK1Q9UPV9 953 aa35.72■■■■□ 3.31
RAPGEF1-206ENST00000438647 ORAI2Q96SN7 254 aa35.7■■■■□ 3.31
RAPGEF1-206ENST00000438647 NEUROD1Q13562 356 aa35.69■■■■□ 3.3
RAPGEF1-206ENST00000438647 KIAA1210Q9ULL0 1709 aa35.68■■■■□ 3.3
RAPGEF1-206ENST00000438647 SAFB2Q14151 953 aaKnown RBP eCLIP35.67■■■■□ 3.3
RAPGEF1-206ENST00000438647 L3MBTL2Q969R5 705 aa35.67■■■■□ 3.3
RAPGEF1-206ENST00000438647 ESCO1Q5FWF5 840 aa35.66■■■■□ 3.3
RAPGEF1-206ENST00000438647 LRRC59Q96AG4 307 aaKnown RBP35.66■■■■□ 3.3
RAPGEF1-206ENST00000438647 SPATA31A6Q5VVP1 1343 aa35.65■■■■□ 3.3
RAPGEF1-206ENST00000438647 DDX17Q92841 729 aaKnown RBP35.63■■■■□ 3.29
RAPGEF1-206ENST00000438647 FMN2Q9NZ56 1722 aa35.63■■■■□ 3.29
RAPGEF1-206ENST00000438647 SHPRHQ149N8 1683 aa35.62■■■■□ 3.29
RAPGEF1-206ENST00000438647 NUTM2FA1L443 756 aa35.62■■■■□ 3.29
RAPGEF1-206ENST00000438647 NPHP3Q7Z494 1330 aa35.59■■■■□ 3.29
RAPGEF1-206ENST00000438647 ILDR2Q71H61 639 aa35.59■■■■□ 3.29
RAPGEF1-206ENST00000438647 ADGRB2O60241 1585 aa35.58■■■■□ 3.29
RAPGEF1-206ENST00000438647 SOS2Q07890 1332 aaPredicted RBP35.57■■■■□ 3.29
RAPGEF1-206ENST00000438647 ARHGEF28Q8N1W1 1705 aaKnown RBP35.54■■■■□ 3.28
RAPGEF1-206ENST00000438647 NBPF1Q3BBV0 1214 aa35.54■■■■□ 3.28
RAPGEF1-206ENST00000438647 MINK1Q8N4C8 1332 aaPredicted RBP35.53■■■■□ 3.28
RAPGEF1-206ENST00000438647 EIF3AQ14152 1382 aaKnown RBP35.52■■■■□ 3.28
RAPGEF1-206ENST00000438647 FOXO3O43524 673 aa35.51■■■■□ 3.28
RAPGEF1-206ENST00000438647 HIRIP3Q9BW71 556 aaPredicted RBP35.51■■■■□ 3.28
RAPGEF1-206ENST00000438647 ANKARQ7Z5J8 1434 aa35.5■■■■□ 3.27
RAPGEF1-206ENST00000438647 KIF1AQ12756 1690 aa35.5■■■■□ 3.27
RAPGEF1-206ENST00000438647 PNPLA6Q8IY17 1366 aa35.5■■■■□ 3.27
RAPGEF1-206ENST00000438647 MEX3CQ5U5Q3 659 aaKnown RBP35.48■■■■□ 3.27
RAPGEF1-206ENST00000438647 LRP6O75581 1613 aa35.47■■■■□ 3.27
RAPGEF1-206ENST00000438647 TONSLQ96HA7 1378 aa35.47■■■■□ 3.27
RAPGEF1-206ENST00000438647 WASLO00401 505 aaPredicted RBP35.46■■■■□ 3.27
RAPGEF1-206ENST00000438647 PHF8Q9UPP1 1060 aa35.46■■■■□ 3.27
RAPGEF1-206ENST00000438647 PXDNQ92626 1479 aa35.45■■■■□ 3.27
RAPGEF1-206ENST00000438647 NUTM2BA6NNL0 878 aaPredicted RBP35.44■■■■□ 3.26
RAPGEF1-206ENST00000438647 NUTM2EB1AL46 878 aaPredicted RBP35.44■■■■□ 3.26
RAPGEF1-206ENST00000438647 NUTM2AQ8IVF1 878 aaPredicted RBP35.44■■■■□ 3.26
RAPGEF1-206ENST00000438647 RGS17Q9UGC6 210 aaPredicted RBP35.44■■■■□ 3.26
RAPGEF1-206ENST00000438647 TULP4Q9NRJ4 1543 aa35.42■■■■□ 3.26
RAPGEF1-206ENST00000438647 TRPM1Q7Z4N2 1603 aa35.41■■■■□ 3.26
RAPGEF1-206ENST00000438647 RGPD8O14715 1765 aaPredicted RBP35.41■■■■□ 3.26
RAPGEF1-206ENST00000438647 XPCQ01831 940 aaPredicted RBP35.4■■■■□ 3.26
RAPGEF1-206ENST00000438647 ROCK2O75116 1388 aaKnown RBP35.39■■■■□ 3.26
RAPGEF1-206ENST00000438647 USP32Q8NFA0 1604 aa35.39■■■■□ 3.26
RAPGEF1-206ENST00000438647 PCGF6Q9BYE7 350 aa35.38■■■■□ 3.25
RAPGEF1-206ENST00000438647 CENPJQ9HC77 1338 aaPredicted RBP35.37■■■■□ 3.25
RAPGEF1-206ENST00000438647 KRT28Q7Z3Y7 464 aa35.36■■■■□ 3.25
RAPGEF1-206ENST00000438647 PSME1Q06323 249 aa35.35■■■■□ 3.25
RAPGEF1-206ENST00000438647 PRR36Q9H6K5 1346 aa35.33■■■■□ 3.25
RAPGEF1-206ENST00000438647 PMFBP1Q8TBY8 1022 aa35.33■■■■□ 3.25
RAPGEF1-206ENST00000438647 NBPF8Q3BBV2 869 aa35.32■■■■□ 3.24
RAPGEF1-206ENST00000438647 COL22A1Q8NFW1 1626 aaPredicted RBP35.32■■■■□ 3.24
RAPGEF1-206ENST00000438647 CDK19Q9BWU1 502 aa35.31■■■■□ 3.24
RAPGEF1-206ENST00000438647 SPATA31A3Q5VYP0 1347 aa35.31■■■■□ 3.24
RAPGEF1-206ENST00000438647 SOCS7O14512 581 aa35.3■■■■□ 3.24
RAPGEF1-206ENST00000438647 ZNF772Q68DY9 489 aaPredicted RBP35.3■■■■□ 3.24
RAPGEF1-206ENST00000438647 ATP7BP35670 1465 aa35.29■■■■□ 3.24
RAPGEF1-206ENST00000438647 POTEAQ6S8J7 498 aa35.28■■■■□ 3.24
RAPGEF1-206ENST00000438647 NUDT16Q96DE0 195 aaKnown RBP35.28■■■■□ 3.24
RAPGEF1-206ENST00000438647 SBNO1A3KN83 1393 aa35.27■■■■□ 3.24
RAPGEF1-206ENST00000438647 GPRASP1Q5JY77 1395 aa35.27■■■■□ 3.24
RAPGEF1-206ENST00000438647 TNS3Q68CZ2 1445 aa35.26■■■■□ 3.24
RAPGEF1-206ENST00000438647 ITSN1Q15811 1721 aa35.26■■■■□ 3.23
RAPGEF1-206ENST00000438647 C8orf37Q96NL8 207 aa35.25■■■■□ 3.23
RAPGEF1-206ENST00000438647 QRICH2Q9H0J4 1663 aa35.24■■■■□ 3.23
RAPGEF1-206ENST00000438647 ADAMTS2O95450 1211 aa35.24■■■■□ 3.23
RAPGEF1-206ENST00000438647 NGDNQ8NEJ9 315 aaKnown RBP35.24■■■■□ 3.23
RAPGEF1-206ENST00000438647 CLSPNQ9HAW4 1339 aa35.24■■■■□ 3.23
RAPGEF1-206ENST00000438647 RALGAPBQ86X10 1494 aa35.22■■■■□ 3.23
RAPGEF1-206ENST00000438647 CCDC61Q9Y6R9 512 aa35.22■■■■□ 3.23
RAPGEF1-206ENST00000438647 AFF2P51816 1311 aa35.21■■■■□ 3.23
RAPGEF1-206ENST00000438647 SRPK2P78362 688 aaKnown RBP35.2■■■■□ 3.23
RAPGEF1-206ENST00000438647 CARD11Q9BXL7 1154 aa35.2■■■■□ 3.23
RAPGEF1-206ENST00000438647 ARHGEF10O15013 1369 aa35.2■■■■□ 3.23
RAPGEF1-206ENST00000438647 NGLY1Q96IV0 654 aa35.18■■■■□ 3.22
RAPGEF1-206ENST00000438647 LMOD2Q6P5Q4 547 aa35.16■■■■□ 3.22
RAPGEF1-206ENST00000438647 EVC2Q86UK5 1308 aa35.15■■■■□ 3.22
RAPGEF1-206ENST00000438647 TOPAZ1Q8N9V7 1692 aa35.14■■■■□ 3.22
RAPGEF1-206ENST00000438647 PLEKHG3A1L390 1219 aa35.12■■■■□ 3.21
RAPGEF1-206ENST00000438647 CABP2Q9NPB3 220 aa35.12■■■■□ 3.21
RAPGEF1-206ENST00000438647 TRPM3Q9HCF6 1732 aaPredicted RBP35.12■■■■□ 3.21
RAPGEF1-206ENST00000438647 HAP1P54257 671 aaPredicted RBP35.11■■■■□ 3.21
RAPGEF1-206ENST00000438647 POLR3AO14802 1390 aaPredicted RBP35.11■■■■□ 3.21
RAPGEF1-206ENST00000438647 TIMELESSQ9UNS1 1208 aa35.1■■■■□ 3.21
RAPGEF1-206ENST00000438647 ACEP12821 1306 aa35.08■■■■□ 3.21
RAPGEF1-206ENST00000438647 FNBP4Q8N3X1 1017 aaPredicted RBP35.08■■■■□ 3.21
RAPGEF1-206ENST00000438647 PPIP5K1Q6PFW1 1433 aa35.07■■■■□ 3.21
RAPGEF1-206ENST00000438647 PAK3O75914 559 aaPredicted RBP35.07■■■■□ 3.2
RAPGEF1-206ENST00000438647 SBNO2Q9Y2G9 1366 aa35.07■■■■□ 3.2
RAPGEF1-206ENST00000438647 MARF1Q9Y4F3 1742 aaKnown RBP35.06■■■■□ 3.2
RAPGEF1-206ENST00000438647 RXRBP28702 533 aa35.05■■■■□ 3.2
RAPGEF1-206ENST00000438647 USP21Q9UK80 565 aa35.05■■■■□ 3.2
RAPGEF1-206ENST00000438647 ALS2Q96Q42 1657 aa35.05■■■■□ 3.2
RAPGEF1-206ENST00000438647 QTRT2Q9H974 415 aaKnown RBP35.04■■■■□ 3.2
RAPGEF1-206ENST00000438647 CABLES1Q8TDN4 633 aa35.02■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms