RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 DLC1Q96QB1 1528 aa28.26■■■□□ 2.11
SURF1-202ENST00000437995 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
SURF1-202ENST00000437995 NEUROD1Q13562 356 aa28.2■■■□□ 2.1
SURF1-202ENST00000437995 PRAM1Q96QH2 718 aa28.2■■■□□ 2.1
SURF1-202ENST00000437995 NHSL1Q5SYE7 1610 aa28.2■■■□□ 2.1
SURF1-202ENST00000437995 KIAA1210Q9ULL0 1709 aa28.2■■■□□ 2.1
SURF1-202ENST00000437995 L3MBTL2Q969R5 705 aa28.19■■■□□ 2.1
SURF1-202ENST00000437995 TRAK1Q9UPV9 953 aa28.19■■■□□ 2.1
SURF1-202ENST00000437995 JCADQ9P266 1359 aa28.19■■■□□ 2.1
SURF1-202ENST00000437995 POGKQ9P215 609 aa28.17■■■□□ 2.1
SURF1-202ENST00000437995 FMN2Q9NZ56 1722 aa28.15■■■□□ 2.1
SURF1-202ENST00000437995 SAFB2Q14151 953 aaKnown RBP eCLIP28.15■■■□□ 2.1
SURF1-202ENST00000437995 ORAI2Q96SN7 254 aa28.15■■■□□ 2.1
SURF1-202ENST00000437995 DDX17Q92841 729 aaKnown RBP28.11■■■□□ 2.09
SURF1-202ENST00000437995 ARHGEF28Q8N1W1 1705 aaKnown RBP28.11■■■□□ 2.09
SURF1-202ENST00000437995 NUTM2FA1L443 756 aa28.1■■■□□ 2.09
SURF1-202ENST00000437995 ESCO1Q5FWF5 840 aa28.1■■■□□ 2.09
SURF1-202ENST00000437995 ADGRB2O60241 1585 aa28.1■■■□□ 2.09
SURF1-202ENST00000437995 SHPRHQ149N8 1683 aa28.1■■■□□ 2.09
SURF1-202ENST00000437995 NBPF1Q3BBV0 1214 aa28.08■■■□□ 2.09
SURF1-202ENST00000437995 PHF23Q9BUL5 403 aaPredicted RBP28.08■■■□□ 2.09
SURF1-202ENST00000437995 LRRC59Q96AG4 307 aaKnown RBP28.06■■■□□ 2.08
SURF1-202ENST00000437995 SPATA31A6Q5VVP1 1343 aa28.06■■■□□ 2.08
SURF1-202ENST00000437995 MINK1Q8N4C8 1332 aaPredicted RBP28.05■■■□□ 2.08
SURF1-202ENST00000437995 SOS2Q07890 1332 aaPredicted RBP28.04■■■□□ 2.08
SURF1-202ENST00000437995 NPHP3Q7Z494 1330 aa28.03■■■□□ 2.08
SURF1-202ENST00000437995 HIRIP3Q9BW71 556 aaPredicted RBP28.03■■■□□ 2.08
SURF1-202ENST00000437995 KIF1AQ12756 1690 aa28.02■■■□□ 2.08
SURF1-202ENST00000437995 TRPM1Q7Z4N2 1603 aa28.02■■■□□ 2.08
SURF1-202ENST00000437995 TONSLQ96HA7 1378 aa28.01■■■□□ 2.07
SURF1-202ENST00000437995 PCGF6Q9BYE7 350 aa28.01■■■□□ 2.07
SURF1-202ENST00000437995 ANKARQ7Z5J8 1434 aa28.01■■■□□ 2.07
SURF1-202ENST00000437995 ILDR2Q71H61 639 aa28■■■□□ 2.07
SURF1-202ENST00000437995 RGPD8O14715 1765 aaPredicted RBP28■■■□□ 2.07
SURF1-202ENST00000437995 EIF3AQ14152 1382 aaKnown RBP27.99■■■□□ 2.07
SURF1-202ENST00000437995 FOXO3O43524 673 aa27.99■■■□□ 2.07
SURF1-202ENST00000437995 LRP6O75581 1613 aa27.99■■■□□ 2.07
SURF1-202ENST00000437995 PNPLA6Q8IY17 1366 aa27.99■■■□□ 2.07
SURF1-202ENST00000437995 PXDNQ92626 1479 aa27.98■■■□□ 2.07
SURF1-202ENST00000437995 USP32Q8NFA0 1604 aa27.98■■■□□ 2.07
SURF1-202ENST00000437995 WASLO00401 505 aaPredicted RBP27.97■■■□□ 2.07
SURF1-202ENST00000437995 PHF8Q9UPP1 1060 aa27.96■■■□□ 2.07
SURF1-202ENST00000437995 TULP4Q9NRJ4 1543 aa27.96■■■□□ 2.07
SURF1-202ENST00000437995 NBPF8Q3BBV2 869 aa27.94■■■□□ 2.06
SURF1-202ENST00000437995 ROCK2O75116 1388 aaKnown RBP27.94■■■□□ 2.06
SURF1-202ENST00000437995 XPCQ01831 940 aaPredicted RBP27.93■■■□□ 2.06
SURF1-202ENST00000437995 NUTM2BA6NNL0 878 aaPredicted RBP27.92■■■□□ 2.06
SURF1-202ENST00000437995 NUTM2EB1AL46 878 aaPredicted RBP27.92■■■□□ 2.06
SURF1-202ENST00000437995 NUTM2AQ8IVF1 878 aaPredicted RBP27.92■■■□□ 2.06
SURF1-202ENST00000437995 RGS17Q9UGC6 210 aaPredicted RBP27.92■■■□□ 2.06
SURF1-202ENST00000437995 CENPJQ9HC77 1338 aaPredicted RBP27.92■■■□□ 2.06
SURF1-202ENST00000437995 MEX3CQ5U5Q3 659 aaKnown RBP27.91■■■□□ 2.06
SURF1-202ENST00000437995 PRR36Q9H6K5 1346 aa27.91■■■□□ 2.06
SURF1-202ENST00000437995 GPRASP1Q5JY77 1395 aa27.87■■■□□ 2.05
SURF1-202ENST00000437995 KRT28Q7Z3Y7 464 aa27.87■■■□□ 2.05
SURF1-202ENST00000437995 COL22A1Q8NFW1 1626 aaPredicted RBP27.87■■■□□ 2.05
SURF1-202ENST00000437995 QRICH2Q9H0J4 1663 aa27.87■■■□□ 2.05
SURF1-202ENST00000437995 PMFBP1Q8TBY8 1022 aa27.86■■■□□ 2.05
SURF1-202ENST00000437995 CDK19Q9BWU1 502 aa27.86■■■□□ 2.05
SURF1-202ENST00000437995 ATP7BP35670 1465 aa27.86■■■□□ 2.05
SURF1-202ENST00000437995 ITSN1Q15811 1721 aa27.84■■■□□ 2.05
SURF1-202ENST00000437995 RALGAPBQ86X10 1494 aa27.84■■■□□ 2.05
SURF1-202ENST00000437995 PSME1Q06323 249 aa27.84■■■□□ 2.05
SURF1-202ENST00000437995 NUDT16Q96DE0 195 aaKnown RBP27.84■■■□□ 2.05
SURF1-202ENST00000437995 SPATA31A3Q5VYP0 1347 aa27.83■■■□□ 2.05
SURF1-202ENST00000437995 CLSPNQ9HAW4 1339 aa27.83■■■□□ 2.05
SURF1-202ENST00000437995 SBNO1A3KN83 1393 aa27.81■■■□□ 2.04
SURF1-202ENST00000437995 TNS3Q68CZ2 1445 aa27.8■■■□□ 2.04
SURF1-202ENST00000437995 POTEAQ6S8J7 498 aa27.79■■■□□ 2.04
SURF1-202ENST00000437995 CARD11Q9BXL7 1154 aa27.79■■■□□ 2.04
SURF1-202ENST00000437995 TOPAZ1Q8N9V7 1692 aa27.78■■■□□ 2.04
SURF1-202ENST00000437995 ADAMTS2O95450 1211 aa27.77■■■□□ 2.04
SURF1-202ENST00000437995 NGDNQ8NEJ9 315 aaKnown RBP27.77■■■□□ 2.04
SURF1-202ENST00000437995 SRPK2P78362 688 aaKnown RBP27.76■■■□□ 2.03
SURF1-202ENST00000437995 ZNF772Q68DY9 489 aaPredicted RBP27.76■■■□□ 2.03
SURF1-202ENST00000437995 CCDC61Q9Y6R9 512 aa27.76■■■□□ 2.03
SURF1-202ENST00000437995 TRPM3Q9HCF6 1732 aaPredicted RBP27.75■■■□□ 2.03
SURF1-202ENST00000437995 C8orf37Q96NL8 207 aa27.75■■■□□ 2.03
SURF1-202ENST00000437995 AFF2P51816 1311 aa27.74■■■□□ 2.03
SURF1-202ENST00000437995 ARHGEF10O15013 1369 aa27.73■■■□□ 2.03
SURF1-202ENST00000437995 EVC2Q86UK5 1308 aa27.72■■■□□ 2.03
SURF1-202ENST00000437995 SOCS7O14512 581 aa27.72■■■□□ 2.03
SURF1-202ENST00000437995 CABP2Q9NPB3 220 aa27.72■■■□□ 2.03
SURF1-202ENST00000437995 LMOD2Q6P5Q4 547 aa27.71■■■□□ 2.03
SURF1-202ENST00000437995 TIMELESSQ9UNS1 1208 aa27.71■■■□□ 2.03
SURF1-202ENST00000437995 PLEKHG3A1L390 1219 aa27.7■■■□□ 2.02
SURF1-202ENST00000437995 POLR3AO14802 1390 aaPredicted RBP27.7■■■□□ 2.02
SURF1-202ENST00000437995 NGLY1Q96IV0 654 aa27.69■■■□□ 2.02
SURF1-202ENST00000437995 ALS2Q96Q42 1657 aa27.68■■■□□ 2.02
SURF1-202ENST00000437995 PPIP5K1Q6PFW1 1433 aa27.68■■■□□ 2.02
SURF1-202ENST00000437995 MARF1Q9Y4F3 1742 aaKnown RBP27.68■■■□□ 2.02
SURF1-202ENST00000437995 CCER1Q8TC90 406 aaPredicted RBP27.68■■■□□ 2.02
SURF1-202ENST00000437995 SBNO2Q9Y2G9 1366 aa27.68■■■□□ 2.02
SURF1-202ENST00000437995 ACEP12821 1306 aa27.67■■■□□ 2.02
SURF1-202ENST00000437995 ABCA3Q99758 1704 aa27.64■■■□□ 2.02
SURF1-202ENST00000437995 PAK3O75914 559 aaPredicted RBP27.64■■■□□ 2.02
SURF1-202ENST00000437995 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
SURF1-202ENST00000437995 CABLES1Q8TDN4 633 aa27.63■■■□□ 2.01
SURF1-202ENST00000437995 FNBP4Q8N3X1 1017 aaPredicted RBP27.62■■■□□ 2.01
SURF1-202ENST00000437995 PLEKHG5O94827 1062 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms