RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ZNF772Q68DY9 489 aaPredicted RBP21.48■■□□□ 1.03
TNFRSF1A-203ENST00000437813 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
TNFRSF1A-203ENST00000437813 PLEKHH1Q9ULM0 1364 aa21.47■■□□□ 1.03
TNFRSF1A-203ENST00000437813 NUTM2BA6NNL0 878 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1A-203ENST00000437813 NUTM2EB1AL46 878 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1A-203ENST00000437813 MEX3CQ5U5Q3 659 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-203ENST00000437813 NUTM2AQ8IVF1 878 aaPredicted RBP21.46■■□□□ 1.03
TNFRSF1A-203ENST00000437813 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
TNFRSF1A-203ENST00000437813 PXDNQ92626 1479 aa21.45■■□□□ 1.03
TNFRSF1A-203ENST00000437813 TMEM132EQ6IEE7 984 aa21.45■■□□□ 1.02
TNFRSF1A-203ENST00000437813 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.02
TNFRSF1A-203ENST00000437813 WAPLQ7Z5K2 1190 aa21.44■■□□□ 1.02
TNFRSF1A-203ENST00000437813 C14orf93Q9H972 538 aaKnown RBP21.44■■□□□ 1.02
TNFRSF1A-203ENST00000437813 FMN2Q9NZ56 1722 aa21.43■■□□□ 1.02
TNFRSF1A-203ENST00000437813 AFF2P51816 1311 aa21.43■■□□□ 1.02
TNFRSF1A-203ENST00000437813 SIRT1Q96EB6 747 aa21.42■■□□□ 1.02
TNFRSF1A-203ENST00000437813 STK26Q9P289 416 aa21.41■■□□□ 1.02
TNFRSF1A-203ENST00000437813 ADGRB1O14514 1584 aa21.39■■□□□ 1.01
TNFRSF1A-203ENST00000437813 NPHP3Q7Z494 1330 aa21.37■■□□□ 1.01
TNFRSF1A-203ENST00000437813 CFAP70Q5T0N1 1121 aa21.37■■□□□ 1.01
TNFRSF1A-203ENST00000437813 DLC1Q96QB1 1528 aa21.36■■□□□ 1.01
TNFRSF1A-203ENST00000437813 RXRBP28702 533 aa21.36■■□□□ 1.01
TNFRSF1A-203ENST00000437813 ESCO1Q5FWF5 840 aa21.36■■□□□ 1.01
TNFRSF1A-203ENST00000437813 HRCP23327 699 aa21.35■■□□□ 1.01
TNFRSF1A-203ENST00000437813 C8orf37Q96NL8 207 aa21.35■■□□□ 1.01
TNFRSF1A-203ENST00000437813 KIF1AQ12756 1690 aa21.34■■□□□ 1.01
TNFRSF1A-203ENST00000437813 RGPD8O14715 1765 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-203ENST00000437813 MARF1Q9Y4F3 1742 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1A-203ENST00000437813 RGS12O14924 1447 aa21.33■■□□□ 1.01
TNFRSF1A-203ENST00000437813 FOXO3O43524 673 aa21.33■■□□□ 1.01
TNFRSF1A-203ENST00000437813 UPF1Q92900 1129 aaKnown RBP eCLIP21.33■■□□□ 1.01
TNFRSF1A-203ENST00000437813 FNBP4Q8N3X1 1017 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-203ENST00000437813 DHX57Q6P158 1386 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-203ENST00000437813 ADGRB2O60241 1585 aa21.31■■□□□ 1
TNFRSF1A-203ENST00000437813 ADAMTS2O95450 1211 aa21.31■■□□□ 1
TNFRSF1A-203ENST00000437813 USP32Q8NFA0 1604 aa21.3■■□□□ 1
TNFRSF1A-203ENST00000437813 NUTM2FA1L443 756 aa21.3■■□□□ 1
TNFRSF1A-203ENST00000437813 QTRT2Q9H974 415 aaKnown RBP21.3■■□□□ 1
TNFRSF1A-203ENST00000437813 RBM6P78332 1123 aaKnown RBP21.29■■□□□ 1
TNFRSF1A-203ENST00000437813 XPCQ01831 940 aaPredicted RBP21.29■■□□□ 1
TNFRSF1A-203ENST00000437813 BCL9LQ86UU0 1499 aa21.28■■□□□ 1
TNFRSF1A-203ENST00000437813 NGLY1Q96IV0 654 aa21.28■■□□□ 1
TNFRSF1A-203ENST00000437813 ATRNO75882 1429 aa21.28■■□□□ 1
TNFRSF1A-203ENST00000437813 SPATA31A3Q5VYP0 1347 aa21.27■□□□□ 0.99
TNFRSF1A-203ENST00000437813 PRAM1Q96QH2 718 aa21.26■□□□□ 0.99
TNFRSF1A-203ENST00000437813 ANKARQ7Z5J8 1434 aa21.24■□□□□ 0.99
TNFRSF1A-203ENST00000437813 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1A-203ENST00000437813 STAC3Q96MF2 364 aa21.23■□□□□ 0.99
TNFRSF1A-203ENST00000437813 USP21Q9UK80 565 aa21.23■□□□□ 0.99
TNFRSF1A-203ENST00000437813 PHF8Q9UPP1 1060 aa21.22■□□□□ 0.99
TNFRSF1A-203ENST00000437813 ABCA3Q99758 1704 aa21.21■□□□□ 0.99
TNFRSF1A-203ENST00000437813 SLIT2O94813 1529 aa21.21■□□□□ 0.99
TNFRSF1A-203ENST00000437813 TNS3Q68CZ2 1445 aa21.21■□□□□ 0.99
TNFRSF1A-203ENST00000437813 KRT28Q7Z3Y7 464 aa21.2■□□□□ 0.98
TNFRSF1A-203ENST00000437813 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
TNFRSF1A-203ENST00000437813 TRPC5Q9UL62 973 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1A-203ENST00000437813 TRPM3Q9HCF6 1732 aaPredicted RBP21.2■□□□□ 0.98
TNFRSF1A-203ENST00000437813 ARHGEF28Q8N1W1 1705 aaKnown RBP21.19■□□□□ 0.98
TNFRSF1A-203ENST00000437813 SAFB2Q14151 953 aaKnown RBP eCLIP21.19■□□□□ 0.98
TNFRSF1A-203ENST00000437813 SBNO1A3KN83 1393 aa21.19■□□□□ 0.98
TNFRSF1A-203ENST00000437813 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
TNFRSF1A-203ENST00000437813 TULP4Q9NRJ4 1543 aa21.17■□□□□ 0.98
TNFRSF1A-203ENST00000437813 EP400Q96L91 3159 aa21.17■□□□□ 0.98
TNFRSF1A-203ENST00000437813 TRAK1Q9UPV9 953 aa21.16■□□□□ 0.98
TNFRSF1A-203ENST00000437813 KDM2AQ9Y2K7 1162 aa21.16■□□□□ 0.98
TNFRSF1A-203ENST00000437813 ALS2Q96Q42 1657 aa21.15■□□□□ 0.98
TNFRSF1A-203ENST00000437813 GLI3P10071 1580 aa21.15■□□□□ 0.98
TNFRSF1A-203ENST00000437813 POGKQ9P215 609 aa21.15■□□□□ 0.98
TNFRSF1A-203ENST00000437813 KIAA1210Q9ULL0 1709 aa21.14■□□□□ 0.97
TNFRSF1A-203ENST00000437813 HIRIP3Q9BW71 556 aaPredicted RBP21.12■□□□□ 0.97
TNFRSF1A-203ENST00000437813 NWD2Q9ULI1 1742 aa21.12■□□□□ 0.97
TNFRSF1A-203ENST00000437813 CRYBG1Q9Y4K1 1723 aa21.12■□□□□ 0.97
TNFRSF1A-203ENST00000437813 PLCH1Q4KWH8 1693 aa21.12■□□□□ 0.97
TNFRSF1A-203ENST00000437813 MINK1Q8N4C8 1332 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF1A-203ENST00000437813 WASLO00401 505 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF1A-203ENST00000437813 PSME1Q06323 249 aa21.11■□□□□ 0.97
TNFRSF1A-203ENST00000437813 GJD4Q96KN9 370 aaPredicted RBP21.11■□□□□ 0.97
TNFRSF1A-203ENST00000437813 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
TNFRSF1A-203ENST00000437813 ATP7BP35670 1465 aa21.1■□□□□ 0.97
TNFRSF1A-203ENST00000437813 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
TNFRSF1A-203ENST00000437813 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
TNFRSF1A-203ENST00000437813 CABLES1Q8TDN4 633 aa21.1■□□□□ 0.97
TNFRSF1A-203ENST00000437813 ATAD2Q6PL18 1390 aa21.1■□□□□ 0.97
TNFRSF1A-203ENST00000437813 PMFBP1Q8TBY8 1022 aa21.09■□□□□ 0.97
TNFRSF1A-203ENST00000437813 EIF3AQ14152 1382 aaKnown RBP21.09■□□□□ 0.97
TNFRSF1A-203ENST00000437813 TOPAZ1Q8N9V7 1692 aa21.06■□□□□ 0.96
TNFRSF1A-203ENST00000437813 ITSN1Q15811 1721 aa21.06■□□□□ 0.96
TNFRSF1A-203ENST00000437813 NRAPQ86VF7 1730 aa21.06■□□□□ 0.96
TNFRSF1A-203ENST00000437813 BRWD3Q6RI45 1802 aa21.05■□□□□ 0.96
TNFRSF1A-203ENST00000437813 FAM83GA6ND36 823 aa21.02■□□□□ 0.96
TNFRSF1A-203ENST00000437813 VPS72Q15906 364 aa21.02■□□□□ 0.96
TNFRSF1A-203ENST00000437813 GPRASP1Q5JY77 1395 aa21.01■□□□□ 0.95
TNFRSF1A-203ENST00000437813 ONECUT3O60422 494 aaPredicted RBP21.01■□□□□ 0.95
TNFRSF1A-203ENST00000437813 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
TNFRSF1A-203ENST00000437813 COL14A1Q05707 1796 aaKnown RBP21■□□□□ 0.95
TNFRSF1A-203ENST00000437813 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
TNFRSF1A-203ENST00000437813 NUDT16Q96DE0 195 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-203ENST00000437813 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
TNFRSF1A-203ENST00000437813 CDK19Q9BWU1 502 aa20.96■□□□□ 0.95
TNFRSF1A-203ENST00000437813 PHRF1Q9P1Y6 1649 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms