RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
DDR1-237ENST00000437124 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
DDR1-237ENST00000437124 MYOM2P54296 1465 aa22.79■■□□□ 1.24
DDR1-237ENST00000437124 BCL9LQ86UU0 1499 aa22.77■■□□□ 1.24
DDR1-237ENST00000437124 HFM1A2PYH4 1435 aa22.75■■□□□ 1.23
DDR1-237ENST00000437124 VGFO15240 615 aaPredicted RBP22.75■■□□□ 1.23
DDR1-237ENST00000437124 NPHP3Q7Z494 1330 aa22.74■■□□□ 1.23
DDR1-237ENST00000437124 KIF1BO60333 1816 aa22.72■■□□□ 1.23
DDR1-237ENST00000437124 PXDNQ92626 1479 aa22.72■■□□□ 1.23
DDR1-237ENST00000437124 GJD4Q96KN9 370 aaPredicted RBP22.71■■□□□ 1.23
DDR1-237ENST00000437124 CDC42BPGQ6DT37 1551 aa22.71■■□□□ 1.23
DDR1-237ENST00000437124 MARF1Q9Y4F3 1742 aaKnown RBP22.69■■□□□ 1.22
DDR1-237ENST00000437124 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
DDR1-237ENST00000437124 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.67■■□□□ 1.22
DDR1-237ENST00000437124 BLMP54132 1417 aaPredicted RBP22.66■■□□□ 1.22
DDR1-237ENST00000437124 ESCO1Q5FWF5 840 aa22.66■■□□□ 1.22
DDR1-237ENST00000437124 LRPPRCP42704 1394 aaKnown RBP22.65■■□□□ 1.22
DDR1-237ENST00000437124 FOXO3O43524 673 aa22.63■■□□□ 1.21
DDR1-237ENST00000437124 SLC4A1APQ9BWU0 796 aaKnown RBP22.63■■□□□ 1.21
DDR1-237ENST00000437124 SLIT2O94813 1529 aa22.62■■□□□ 1.21
DDR1-237ENST00000437124 UNC5CLQ8IV45 518 aa22.62■■□□□ 1.21
DDR1-237ENST00000437124 GLI3P10071 1580 aa22.62■■□□□ 1.21
DDR1-237ENST00000437124 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
DDR1-237ENST00000437124 TECPR2O15040 1411 aa22.59■■□□□ 1.21
DDR1-237ENST00000437124 PPLO60437 1756 aa22.59■■□□□ 1.21
DDR1-237ENST00000437124 XPCQ01831 940 aaPredicted RBP22.58■■□□□ 1.21
DDR1-237ENST00000437124 SPATA31A3Q5VYP0 1347 aa22.57■■□□□ 1.2
DDR1-237ENST00000437124 LRP5O75197 1615 aa22.55■■□□□ 1.2
DDR1-237ENST00000437124 CCDC144AA2RUR9 1427 aa22.54■■□□□ 1.2
DDR1-237ENST00000437124 USP32Q8NFA0 1604 aa22.53■■□□□ 1.2
DDR1-237ENST00000437124 DEFB132Q7Z7B7 95 aa22.53■■□□□ 1.2
DDR1-237ENST00000437124 ONECUT3O60422 494 aaPredicted RBP22.52■■□□□ 1.2
DDR1-237ENST00000437124 SF3B2Q13435 895 aaKnown RBP22.52■■□□□ 1.2
DDR1-237ENST00000437124 KIF1AQ12756 1690 aa22.52■■□□□ 1.2
DDR1-237ENST00000437124 ABCC11Q96J66 1382 aa22.51■■□□□ 1.19
DDR1-237ENST00000437124 VPS72Q15906 364 aa22.51■■□□□ 1.19
DDR1-237ENST00000437124 SEPT12Q8IYM1 358 aa22.51■■□□□ 1.19
DDR1-237ENST00000437124 BRWD3Q6RI45 1802 aa22.5■■□□□ 1.19
DDR1-237ENST00000437124 WAPLQ7Z5K2 1190 aa22.49■■□□□ 1.19
DDR1-237ENST00000437124 FMN2Q9NZ56 1722 aa22.48■■□□□ 1.19
DDR1-237ENST00000437124 NUTM2FA1L443 756 aa22.48■■□□□ 1.19
DDR1-237ENST00000437124 ADGRF5Q8IZF2 1346 aa22.48■■□□□ 1.19
DDR1-237ENST00000437124 KNDC1Q76NI1 1749 aa22.48■■□□□ 1.19
DDR1-237ENST00000437124 KRT28Q7Z3Y7 464 aa22.47■■□□□ 1.19
DDR1-237ENST00000437124 MPHOSPH9Q99550 1183 aa22.47■■□□□ 1.19
DDR1-237ENST00000437124 NWD2Q9ULI1 1742 aa22.46■■□□□ 1.19
DDR1-237ENST00000437124 STK26Q9P289 416 aa22.46■■□□□ 1.19
DDR1-237ENST00000437124 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
DDR1-237ENST00000437124 TNS3Q68CZ2 1445 aa22.46■■□□□ 1.19
DDR1-237ENST00000437124 KRT27Q7Z3Y8 459 aa22.45■■□□□ 1.18
DDR1-237ENST00000437124 ANKRD30BQ9BXX2 1392 aa22.45■■□□□ 1.18
DDR1-237ENST00000437124 SIRT1Q96EB6 747 aa22.43■■□□□ 1.18
DDR1-237ENST00000437124 PLCH1Q4KWH8 1693 aa22.42■■□□□ 1.18
DDR1-237ENST00000437124 SPATA31E1Q6ZUB1 1445 aa22.42■■□□□ 1.18
DDR1-237ENST00000437124 SBNO1A3KN83 1393 aa22.42■■□□□ 1.18
DDR1-237ENST00000437124 PSME1Q06323 249 aa22.42■■□□□ 1.18
DDR1-237ENST00000437124 PIK3C2GO75747 1445 aa22.41■■□□□ 1.18
DDR1-237ENST00000437124 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
DDR1-237ENST00000437124 YTHDC2Q9H6S0 1430 aaKnown RBP22.4■■□□□ 1.18
DDR1-237ENST00000437124 BAG6P46379 1132 aa22.4■■□□□ 1.18
DDR1-237ENST00000437124 RGL3Q3MIN7 710 aa22.4■■□□□ 1.18
DDR1-237ENST00000437124 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
DDR1-237ENST00000437124 PHF8Q9UPP1 1060 aa22.4■■□□□ 1.18
DDR1-237ENST00000437124 IFT172Q9UG01 1749 aa22.4■■□□□ 1.18
DDR1-237ENST00000437124 ARHGEF10O15013 1369 aa22.39■■□□□ 1.18
DDR1-237ENST00000437124 HRCP23327 699 aa22.39■■□□□ 1.17
DDR1-237ENST00000437124 CABLES1Q8TDN4 633 aa22.39■■□□□ 1.17
DDR1-237ENST00000437124 ACIN1Q9UKV3 1341 aaKnown RBP22.38■■□□□ 1.17
DDR1-237ENST00000437124 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
DDR1-237ENST00000437124 NRXN1Q9ULB1 1477 aa22.38■■□□□ 1.17
DDR1-237ENST00000437124 ABCA3Q99758 1704 aa22.37■■□□□ 1.17
DDR1-237ENST00000437124 PSDA5PKW4 1024 aaPredicted RBP22.35■■□□□ 1.17
DDR1-237ENST00000437124 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
DDR1-237ENST00000437124 RGPD8O14715 1765 aaPredicted RBP22.32■■□□□ 1.16
DDR1-237ENST00000437124 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
DDR1-237ENST00000437124 DISP2A7MBM2 1401 aa22.31■■□□□ 1.16
DDR1-237ENST00000437124 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
DDR1-237ENST00000437124 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
DDR1-237ENST00000437124 ANKARQ7Z5J8 1434 aa22.3■■□□□ 1.16
DDR1-237ENST00000437124 RGPD1P0DJD0 1748 aa22.29■■□□□ 1.16
DDR1-237ENST00000437124 A0A0G2JS52 829 aa22.29■■□□□ 1.16
DDR1-237ENST00000437124 MYT1Q01538 1121 aa22.29■■□□□ 1.16
DDR1-237ENST00000437124 LMOD2Q6P5Q4 547 aa22.29■■□□□ 1.16
DDR1-237ENST00000437124 RAB3GAP2Q9H2M9 1393 aa22.28■■□□□ 1.16
DDR1-237ENST00000437124 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
DDR1-237ENST00000437124 DHX57Q6P158 1386 aaKnown RBP22.27■■□□□ 1.16
DDR1-237ENST00000437124 EN1Q05925 392 aaPredicted RBP22.27■■□□□ 1.16
DDR1-237ENST00000437124 COL14A1Q05707 1796 aaKnown RBP22.27■■□□□ 1.16
DDR1-237ENST00000437124 PLEKHG5O94827 1062 aa22.26■■□□□ 1.15
DDR1-237ENST00000437124 TRPM3Q9HCF6 1732 aaPredicted RBP22.24■■□□□ 1.15
DDR1-237ENST00000437124 PRAM1Q96QH2 718 aa22.24■■□□□ 1.15
DDR1-237ENST00000437124 SPATA31A5Q5VU36 1347 aa22.24■■□□□ 1.15
DDR1-237ENST00000437124 SPATA31A7Q8IWB4 1347 aa22.24■■□□□ 1.15
DDR1-237ENST00000437124 THSD7AQ9UPZ6 1657 aa22.23■■□□□ 1.15
DDR1-237ENST00000437124 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
DDR1-237ENST00000437124 R3HDM1Q15032 1099 aaKnown RBP22.23■■□□□ 1.15
DDR1-237ENST00000437124 ADGRB2O60241 1585 aa22.23■■□□□ 1.15
DDR1-237ENST00000437124 ALS2Q96Q42 1657 aa22.23■■□□□ 1.15
DDR1-237ENST00000437124 PMFBP1Q8TBY8 1022 aa22.22■■□□□ 1.15
DDR1-237ENST00000437124 TNS1Q9HBL0 1735 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms