RNA–Protein interactions for RNA: ENST00000436803.5

LINC00472-204, long intergenic non-protein coding RNA 472, humanhuman

TSL 5 BASIC

Gene LINC00472, Length 667 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-204ENST00000436803 FOXD1Q16676 465 aa33.05■■■□□ 2.88
LINC00472-204ENST00000436803 MARF1Q9Y4F3 1742 aaKnown RBP33.05■■■□□ 2.88
LINC00472-204ENST00000436803 KNDC1Q76NI1 1749 aa33■■■□□ 2.87
LINC00472-204ENST00000436803 ADGRF5Q8IZF2 1346 aa33■■■□□ 2.87
LINC00472-204ENST00000436803 PXDNQ92626 1479 aa32.99■■■□□ 2.87
LINC00472-204ENST00000436803 USP21Q9UK80 565 aa32.97■■■□□ 2.87
LINC00472-204ENST00000436803 MYOM2P54296 1465 aa32.97■■■□□ 2.87
LINC00472-204ENST00000436803 CCDC144AA2RUR9 1427 aa32.95■■■□□ 2.87
LINC00472-204ENST00000436803 SPATA31E1Q6ZUB1 1445 aa32.95■■■□□ 2.87
LINC00472-204ENST00000436803 ESCO1Q5FWF5 840 aa32.94■■■□□ 2.86
LINC00472-204ENST00000436803 TECPR2O15040 1411 aa32.94■■■□□ 2.86
LINC00472-204ENST00000436803 NPHP3Q7Z494 1330 aa32.93■■■□□ 2.86
LINC00472-204ENST00000436803 FMN2Q9NZ56 1722 aa32.93■■■□□ 2.86
LINC00472-204ENST00000436803 ATRNO75882 1429 aa32.93■■■□□ 2.86
LINC00472-204ENST00000436803 RGL3Q3MIN7 710 aa32.92■■■□□ 2.86
LINC00472-204ENST00000436803 XPCQ01831 940 aaPredicted RBP32.91■■■□□ 2.86
LINC00472-204ENST00000436803 FNBP4Q8N3X1 1017 aaPredicted RBP32.91■■■□□ 2.86
LINC00472-204ENST00000436803 STK26Q9P289 416 aa32.91■■■□□ 2.86
LINC00472-204ENST00000436803 TRPC5Q9UL62 973 aaPredicted RBP32.91■■■□□ 2.86
LINC00472-204ENST00000436803 WAPLQ7Z5K2 1190 aa32.9■■■□□ 2.86
LINC00472-204ENST00000436803 LRPPRCP42704 1394 aaKnown RBP32.89■■■□□ 2.86
LINC00472-204ENST00000436803 PLEKHH1Q9ULM0 1364 aa32.89■■■□□ 2.86
LINC00472-204ENST00000436803 RGPD8O14715 1765 aaPredicted RBP32.88■■■□□ 2.85
LINC00472-204ENST00000436803 NUTM2FA1L443 756 aa32.88■■■□□ 2.85
LINC00472-204ENST00000436803 FOXO3O43524 673 aa32.87■■■□□ 2.85
LINC00472-204ENST00000436803 PIK3C2GO75747 1445 aa32.86■■■□□ 2.85
LINC00472-204ENST00000436803 ATAD2Q6PL18 1390 aa32.86■■■□□ 2.85
LINC00472-204ENST00000436803 ANKRD30BQ9BXX2 1392 aa32.86■■■□□ 2.85
LINC00472-204ENST00000436803 TMEM132EQ6IEE7 984 aa32.85■■■□□ 2.85
LINC00472-204ENST00000436803 BCL9LQ86UU0 1499 aa32.85■■■□□ 2.85
LINC00472-204ENST00000436803 KIF1AQ12756 1690 aa32.85■■■□□ 2.85
LINC00472-204ENST00000436803 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.84■■■□□ 2.85
LINC00472-204ENST00000436803 ABCC11Q96J66 1382 aa32.83■■■□□ 2.85
LINC00472-204ENST00000436803 MPHOSPH9Q99550 1183 aa32.82■■■□□ 2.84
LINC00472-204ENST00000436803 YTHDC2Q9H6S0 1430 aaKnown RBP32.8■■■□□ 2.84
LINC00472-204ENST00000436803 EP400Q96L91 3159 aa32.78■■■□□ 2.84
LINC00472-204ENST00000436803 USP32Q8NFA0 1604 aa32.76■■■□□ 2.83
LINC00472-204ENST00000436803 GLI3P10071 1580 aa32.74■■■□□ 2.83
LINC00472-204ENST00000436803 BRWD3Q6RI45 1802 aa32.72■■■□□ 2.83
LINC00472-204ENST00000436803 SPATA31A3Q5VYP0 1347 aa32.72■■■□□ 2.83
LINC00472-204ENST00000436803 ABCA3Q99758 1704 aa32.71■■■□□ 2.83
LINC00472-204ENST00000436803 SLIT2O94813 1529 aa32.71■■■□□ 2.83
LINC00472-204ENST00000436803 NRXN1Q9ULB1 1477 aa32.7■■■□□ 2.83
LINC00472-204ENST00000436803 GJD4Q96KN9 370 aaPredicted RBP32.69■■■□□ 2.82
LINC00472-204ENST00000436803 PLCH1Q4KWH8 1693 aa32.68■■■□□ 2.82
LINC00472-204ENST00000436803 RALGAPBQ86X10 1494 aa32.66■■■□□ 2.82
LINC00472-204ENST00000436803 KRT28Q7Z3Y7 464 aa32.65■■■□□ 2.82
LINC00472-204ENST00000436803 C14orf93Q9H972 538 aaKnown RBP32.65■■■□□ 2.82
LINC00472-204ENST00000436803 TNS3Q68CZ2 1445 aa32.64■■■□□ 2.82
LINC00472-204ENST00000436803 CFAP70Q5T0N1 1121 aa32.63■■■□□ 2.81
LINC00472-204ENST00000436803 UNC5CLQ8IV45 518 aa32.63■■■□□ 2.81
LINC00472-204ENST00000436803 SIRT1Q96EB6 747 aa32.62■■■□□ 2.81
LINC00472-204ENST00000436803 NWD2Q9ULI1 1742 aa32.61■■■□□ 2.81
LINC00472-204ENST00000436803 SRCAPQ6ZRS2 3230 aa32.6■■■□□ 2.81
LINC00472-204ENST00000436803 PHF8Q9UPP1 1060 aa32.6■■■□□ 2.81
LINC00472-204ENST00000436803 DHX57Q6P158 1386 aaKnown RBP32.59■■■□□ 2.81
LINC00472-204ENST00000436803 SAFB2Q14151 953 aaKnown RBP eCLIP32.59■■■□□ 2.81
LINC00472-204ENST00000436803 CABLES1Q8TDN4 633 aa32.57■■■□□ 2.8
LINC00472-204ENST00000436803 DLC1Q96QB1 1528 aa32.56■■■□□ 2.8
LINC00472-204ENST00000436803 PLEKHG5O94827 1062 aa32.56■■■□□ 2.8
LINC00472-204ENST00000436803 PRAM1Q96QH2 718 aa32.56■■■□□ 2.8
LINC00472-204ENST00000436803 ADGRB2O60241 1585 aa32.56■■■□□ 2.8
LINC00472-204ENST00000436803 TRPM3Q9HCF6 1732 aaPredicted RBP32.54■■■□□ 2.8
LINC00472-204ENST00000436803 CCDC125Q86Z20 511 aa32.54■■■□□ 2.8
LINC00472-204ENST00000436803 ZRANB1Q9UGI0 708 aa32.54■■■□□ 2.8
LINC00472-204ENST00000436803 HAP1P54257 671 aaPredicted RBP32.53■■■□□ 2.8
LINC00472-204ENST00000436803 ADGRB1O14514 1584 aa32.53■■■□□ 2.8
LINC00472-204ENST00000436803 SBNO1A3KN83 1393 aa32.52■■■□□ 2.8
LINC00472-204ENST00000436803 PSME1Q06323 249 aa32.51■■■□□ 2.79
LINC00472-204ENST00000436803 NRAPQ86VF7 1730 aa32.51■■■□□ 2.79
LINC00472-204ENST00000436803 BLMP54132 1417 aaPredicted RBP32.49■■■□□ 2.79
LINC00472-204ENST00000436803 ANKARQ7Z5J8 1434 aa32.49■■■□□ 2.79
LINC00472-204ENST00000436803 ALS2Q96Q42 1657 aa32.49■■■□□ 2.79
LINC00472-204ENST00000436803 LMOD2Q6P5Q4 547 aa32.48■■■□□ 2.79
LINC00472-204ENST00000436803 PMFBP1Q8TBY8 1022 aa32.47■■■□□ 2.79
LINC00472-204ENST00000436803 ARHGEF10O15013 1369 aa32.46■■■□□ 2.79
LINC00472-204ENST00000436803 VPS72Q15906 364 aa32.46■■■□□ 2.79
LINC00472-204ENST00000436803 RAB3GAP2Q9H2M9 1393 aa32.45■■■□□ 2.79
LINC00472-204ENST00000436803 SEPT12Q8IYM1 358 aa32.45■■■□□ 2.79
LINC00472-204ENST00000436803 POGKQ9P215 609 aa32.45■■■□□ 2.79
LINC00472-204ENST00000436803 ACIN1Q9UKV3 1341 aaKnown RBP32.44■■■□□ 2.78
LINC00472-204ENST00000436803 CRYBG1Q9Y4K1 1723 aa32.43■■■□□ 2.78
LINC00472-204ENST00000436803 DEFB132Q7Z7B7 95 aa32.41■■■□□ 2.78
LINC00472-204ENST00000436803 HIRIP3Q9BW71 556 aaPredicted RBP32.41■■■□□ 2.78
LINC00472-204ENST00000436803 CCDC9Q9Y3X0 531 aaKnown RBP32.41■■■□□ 2.78
LINC00472-204ENST00000436803 TRAK1Q9UPV9 953 aa32.4■■■□□ 2.78
LINC00472-204ENST00000436803 TULP4Q9NRJ4 1543 aa32.39■■■□□ 2.78
LINC00472-204ENST00000436803 COL14A1Q05707 1796 aaKnown RBP32.38■■■□□ 2.77
LINC00472-204ENST00000436803 PRR36Q9H6K5 1346 aa32.38■■■□□ 2.77
LINC00472-204ENST00000436803 FAM83GA6ND36 823 aa32.38■■■□□ 2.77
LINC00472-204ENST00000436803 ARHGEF28Q8N1W1 1705 aaKnown RBP32.37■■■□□ 2.77
LINC00472-204ENST00000436803 MINK1Q8N4C8 1332 aaPredicted RBP32.37■■■□□ 2.77
LINC00472-204ENST00000436803 ONECUT3O60422 494 aaPredicted RBP32.36■■■□□ 2.77
LINC00472-204ENST00000436803 ITSN1Q15811 1721 aa32.34■■■□□ 2.77
LINC00472-204ENST00000436803 KRT27Q7Z3Y8 459 aa32.33■■■□□ 2.77
LINC00472-204ENST00000436803 KDM2AQ9Y2K7 1162 aa32.32■■■□□ 2.76
LINC00472-204ENST00000436803 GPRASP1Q5JY77 1395 aa32.31■■■□□ 2.76
LINC00472-204ENST00000436803 SF3B2Q13435 895 aaKnown RBP32.3■■■□□ 2.76
LINC00472-204ENST00000436803 EIF3AQ14152 1382 aaKnown RBP32.3■■■□□ 2.76
LINC00472-204ENST00000436803 DCAF11Q8TEB1 546 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms