RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 TRPC5Q9UL62 973 aaPredicted RBP20.5■□□□□ 0.87
LINC00028-201ENST00000435497 ADGRF5Q8IZF2 1346 aa20.5■□□□□ 0.87
LINC00028-201ENST00000435497 ESCO1Q5FWF5 840 aa20.49■□□□□ 0.87
LINC00028-201ENST00000435497 COL22A1Q8NFW1 1626 aaPredicted RBP20.48■□□□□ 0.87
LINC00028-201ENST00000435497 ATRNO75882 1429 aa20.47■□□□□ 0.87
LINC00028-201ENST00000435497 WAPLQ7Z5K2 1190 aa20.47■□□□□ 0.87
LINC00028-201ENST00000435497 NPHP3Q7Z494 1330 aa20.47■□□□□ 0.87
LINC00028-201ENST00000435497 MYOM2P54296 1465 aa20.46■□□□□ 0.87
LINC00028-201ENST00000435497 FOXO3O43524 673 aa20.46■□□□□ 0.87
LINC00028-201ENST00000435497 XPCQ01831 940 aaPredicted RBP20.46■□□□□ 0.87
LINC00028-201ENST00000435497 PXDNQ92626 1479 aa20.45■□□□□ 0.86
LINC00028-201ENST00000435497 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
LINC00028-201ENST00000435497 STK26Q9P289 416 aa20.45■□□□□ 0.86
LINC00028-201ENST00000435497 CDC42BPGQ6DT37 1551 aa20.45■□□□□ 0.86
LINC00028-201ENST00000435497 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
LINC00028-201ENST00000435497 SRCAPQ6ZRS2 3230 aa20.44■□□□□ 0.86
LINC00028-201ENST00000435497 ATAD2Q6PL18 1390 aa20.44■□□□□ 0.86
LINC00028-201ENST00000435497 BCL9LQ86UU0 1499 aa20.43■□□□□ 0.86
LINC00028-201ENST00000435497 TMEM132EQ6IEE7 984 aa20.43■□□□□ 0.86
LINC00028-201ENST00000435497 LRPPRCP42704 1394 aaKnown RBP20.42■□□□□ 0.86
LINC00028-201ENST00000435497 PLEKHH1Q9ULM0 1364 aa20.42■□□□□ 0.86
LINC00028-201ENST00000435497 TECPR2O15040 1411 aa20.42■□□□□ 0.86
LINC00028-201ENST00000435497 SPATA31E1Q6ZUB1 1445 aa20.42■□□□□ 0.86
LINC00028-201ENST00000435497 ABCC11Q96J66 1382 aa20.41■□□□□ 0.86
LINC00028-201ENST00000435497 CCDC144AA2RUR9 1427 aa20.39■□□□□ 0.85
LINC00028-201ENST00000435497 MPHOSPH9Q99550 1183 aa20.39■□□□□ 0.85
LINC00028-201ENST00000435497 EP400Q96L91 3159 aa20.39■□□□□ 0.85
LINC00028-201ENST00000435497 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.85
LINC00028-201ENST00000435497 ANKRD30BQ9BXX2 1392 aa20.38■□□□□ 0.85
LINC00028-201ENST00000435497 GJD4Q96KN9 370 aaPredicted RBP20.38■□□□□ 0.85
LINC00028-201ENST00000435497 IFT172Q9UG01 1749 aa20.37■□□□□ 0.85
LINC00028-201ENST00000435497 SPATA31A3Q5VYP0 1347 aa20.35■□□□□ 0.85
LINC00028-201ENST00000435497 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
LINC00028-201ENST00000435497 KNDC1Q76NI1 1749 aa20.34■□□□□ 0.85
LINC00028-201ENST00000435497 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
LINC00028-201ENST00000435497 FMN2Q9NZ56 1722 aa20.33■□□□□ 0.85
LINC00028-201ENST00000435497 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.85
LINC00028-201ENST00000435497 UNC5CLQ8IV45 518 aa20.33■□□□□ 0.85
LINC00028-201ENST00000435497 SIRT1Q96EB6 747 aa20.33■□□□□ 0.85
LINC00028-201ENST00000435497 CCDC125Q86Z20 511 aa20.32■□□□□ 0.84
LINC00028-201ENST00000435497 SLIT2O94813 1529 aa20.32■□□□□ 0.84
LINC00028-201ENST00000435497 C14orf93Q9H972 538 aaKnown RBP20.31■□□□□ 0.84
LINC00028-201ENST00000435497 ZRANB1Q9UGI0 708 aa20.3■□□□□ 0.84
LINC00028-201ENST00000435497 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.3■□□□□ 0.84
LINC00028-201ENST00000435497 GLI3P10071 1580 aa20.29■□□□□ 0.84
LINC00028-201ENST00000435497 RGPD8O14715 1765 aaPredicted RBP20.29■□□□□ 0.84
LINC00028-201ENST00000435497 RALGAPBQ86X10 1494 aa20.29■□□□□ 0.84
LINC00028-201ENST00000435497 CFAP70Q5T0N1 1121 aa20.28■□□□□ 0.84
LINC00028-201ENST00000435497 PHF8Q9UPP1 1060 aa20.28■□□□□ 0.84
LINC00028-201ENST00000435497 KIF1AQ12756 1690 aa20.27■□□□□ 0.84
LINC00028-201ENST00000435497 CABLES1Q8TDN4 633 aa20.27■□□□□ 0.84
LINC00028-201ENST00000435497 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
LINC00028-201ENST00000435497 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
LINC00028-201ENST00000435497 BRWD3Q6RI45 1802 aa20.24■□□□□ 0.83
LINC00028-201ENST00000435497 TNS3Q68CZ2 1445 aa20.24■□□□□ 0.83
LINC00028-201ENST00000435497 DHX57Q6P158 1386 aaKnown RBP20.23■□□□□ 0.83
LINC00028-201ENST00000435497 PSME1Q06323 249 aa20.23■□□□□ 0.83
LINC00028-201ENST00000435497 SAFB2Q14151 953 aaKnown RBP eCLIP20.23■□□□□ 0.83
LINC00028-201ENST00000435497 PLEKHG5O94827 1062 aa20.22■□□□□ 0.83
LINC00028-201ENST00000435497 VPS72Q15906 364 aa20.22■□□□□ 0.83
LINC00028-201ENST00000435497 SEPT12Q8IYM1 358 aa20.22■□□□□ 0.83
LINC00028-201ENST00000435497 PRAM1Q96QH2 718 aa20.22■□□□□ 0.83
LINC00028-201ENST00000435497 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
LINC00028-201ENST00000435497 ONECUT3O60422 494 aaPredicted RBP20.21■□□□□ 0.83
LINC00028-201ENST00000435497 BLMP54132 1417 aaPredicted RBP20.2■□□□□ 0.82
LINC00028-201ENST00000435497 HAP1P54257 671 aaPredicted RBP20.2■□□□□ 0.82
LINC00028-201ENST00000435497 DEFB132Q7Z7B7 95 aa20.2■□□□□ 0.82
LINC00028-201ENST00000435497 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
LINC00028-201ENST00000435497 PMFBP1Q8TBY8 1022 aa20.19■□□□□ 0.82
LINC00028-201ENST00000435497 LMOD2Q6P5Q4 547 aa20.18■□□□□ 0.82
LINC00028-201ENST00000435497 POGKQ9P215 609 aa20.16■□□□□ 0.82
LINC00028-201ENST00000435497 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
LINC00028-201ENST00000435497 ABCA3Q99758 1704 aa20.16■□□□□ 0.82
LINC00028-201ENST00000435497 NWD2Q9ULI1 1742 aa20.16■□□□□ 0.82
LINC00028-201ENST00000435497 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
LINC00028-201ENST00000435497 ARHGEF10O15013 1369 aa20.15■□□□□ 0.82
LINC00028-201ENST00000435497 DLC1Q96QB1 1528 aa20.15■□□□□ 0.82
LINC00028-201ENST00000435497 ANKARQ7Z5J8 1434 aa20.14■□□□□ 0.81
LINC00028-201ENST00000435497 ACIN1Q9UKV3 1341 aaKnown RBP20.14■□□□□ 0.81
LINC00028-201ENST00000435497 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
LINC00028-201ENST00000435497 TRAK1Q9UPV9 953 aa20.13■□□□□ 0.81
LINC00028-201ENST00000435497 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
LINC00028-201ENST00000435497 PRR36Q9H6K5 1346 aa20.12■□□□□ 0.81
LINC00028-201ENST00000435497 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
LINC00028-201ENST00000435497 TRPM3Q9HCF6 1732 aaPredicted RBP20.1■□□□□ 0.81
LINC00028-201ENST00000435497 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
LINC00028-201ENST00000435497 SF3B2Q13435 895 aaKnown RBP20.1■□□□□ 0.81
LINC00028-201ENST00000435497 MINK1Q8N4C8 1332 aaPredicted RBP20.09■□□□□ 0.81
LINC00028-201ENST00000435497 BTG4Q9NY30 223 aa20.09■□□□□ 0.81
LINC00028-201ENST00000435497 FAM98CQ17RN3 349 aaKnown RBP20.08■□□□□ 0.81
LINC00028-201ENST00000435497 RAB3GAP2Q9H2M9 1393 aa20.08■□□□□ 0.8
LINC00028-201ENST00000435497 NRAPQ86VF7 1730 aa20.07■□□□□ 0.8
LINC00028-201ENST00000435497 ALS2Q96Q42 1657 aa20.07■□□□□ 0.8
LINC00028-201ENST00000435497 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
LINC00028-201ENST00000435497 KDM2AQ9Y2K7 1162 aa20.07■□□□□ 0.8
LINC00028-201ENST00000435497 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
LINC00028-201ENST00000435497 A0A0G2JS52 829 aa20.04■□□□□ 0.8
LINC00028-201ENST00000435497 MYT1Q01538 1121 aa20.04■□□□□ 0.8
LINC00028-201ENST00000435497 DCAF11Q8TEB1 546 aa20.04■□□□□ 0.8
LINC00028-201ENST00000435497 TULP4Q9NRJ4 1543 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms