RNA–Protein interactions for RNA: ENST00000434521.1

PRDM6-203, Transcript of PR/SET domain 6, humanhuman

TSL 2

Gene PRDM6, Length 699 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM6-203ENST00000434521 NPHP3Q7Z494 1330 aa23.36■■□□□ 1.33
PRDM6-203ENST00000434521 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
PRDM6-203ENST00000434521 VGFO15240 615 aaPredicted RBP23.35■■□□□ 1.33
PRDM6-203ENST00000434521 CLTCL1P53675 1640 aa23.33■■□□□ 1.33
PRDM6-203ENST00000434521 ITGAEP38570 1179 aa23.33■■□□□ 1.33
PRDM6-203ENST00000434521 PXDNQ92626 1479 aa23.32■■□□□ 1.32
PRDM6-203ENST00000434521 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
PRDM6-203ENST00000434521 BLMP54132 1417 aaPredicted RBP23.31■■□□□ 1.32
PRDM6-203ENST00000434521 FOXO3O43524 673 aa23.29■■□□□ 1.32
PRDM6-203ENST00000434521 UNC5CLQ8IV45 518 aa23.29■■□□□ 1.32
PRDM6-203ENST00000434521 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
PRDM6-203ENST00000434521 RPGRIP1LQ68CZ1 1315 aa23.28■■□□□ 1.32
PRDM6-203ENST00000434521 DEFB132Q7Z7B7 95 aa23.27■■□□□ 1.32
PRDM6-203ENST00000434521 RALGAPBQ86X10 1494 aa23.27■■□□□ 1.32
PRDM6-203ENST00000434521 SLIT2O94813 1529 aa23.27■■□□□ 1.32
PRDM6-203ENST00000434521 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
PRDM6-203ENST00000434521 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
PRDM6-203ENST00000434521 GLI3P10071 1580 aa23.23■■□□□ 1.31
PRDM6-203ENST00000434521 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
PRDM6-203ENST00000434521 NAIPQ13075 1403 aa23.2■■□□□ 1.3
PRDM6-203ENST00000434521 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.19■■□□□ 1.3
PRDM6-203ENST00000434521 MARF1Q9Y4F3 1742 aaKnown RBP23.19■■□□□ 1.3
PRDM6-203ENST00000434521 SEPT12Q8IYM1 358 aa23.19■■□□□ 1.3
PRDM6-203ENST00000434521 KIF1BO60333 1816 aa23.19■■□□□ 1.3
PRDM6-203ENST00000434521 ONECUT3O60422 494 aaPredicted RBP23.18■■□□□ 1.3
PRDM6-203ENST00000434521 NUTM2FA1L443 756 aa23.17■■□□□ 1.3
PRDM6-203ENST00000434521 SF3B2Q13435 895 aaKnown RBP23.17■■□□□ 1.3
PRDM6-203ENST00000434521 WAPLQ7Z5K2 1190 aa23.17■■□□□ 1.3
PRDM6-203ENST00000434521 TECPR2O15040 1411 aa23.16■■□□□ 1.3
PRDM6-203ENST00000434521 VPS72Q15906 364 aa23.16■■□□□ 1.3
PRDM6-203ENST00000434521 LRP5O75197 1615 aa23.14■■□□□ 1.29
PRDM6-203ENST00000434521 ADGRF5Q8IZF2 1346 aa23.12■■□□□ 1.29
PRDM6-203ENST00000434521 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
PRDM6-203ENST00000434521 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
PRDM6-203ENST00000434521 STK26Q9P289 416 aa23.12■■□□□ 1.29
PRDM6-203ENST00000434521 ABCC11Q96J66 1382 aa23.12■■□□□ 1.29
PRDM6-203ENST00000434521 PLEKHH1Q9ULM0 1364 aa23.12■■□□□ 1.29
PRDM6-203ENST00000434521 KRT27Q7Z3Y8 459 aa23.11■■□□□ 1.29
PRDM6-203ENST00000434521 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
PRDM6-203ENST00000434521 HRCP23327 699 aa23.09■■□□□ 1.29
PRDM6-203ENST00000434521 BRWD3Q6RI45 1802 aa23.08■■□□□ 1.29
PRDM6-203ENST00000434521 PPLO60437 1756 aa23.08■■□□□ 1.29
PRDM6-203ENST00000434521 PSDA5PKW4 1024 aaPredicted RBP23.07■■□□□ 1.28
PRDM6-203ENST00000434521 CABLES1Q8TDN4 633 aa23.07■■□□□ 1.28
PRDM6-203ENST00000434521 TNS3Q68CZ2 1445 aa23.07■■□□□ 1.28
PRDM6-203ENST00000434521 BAG6P46379 1132 aa23.06■■□□□ 1.28
PRDM6-203ENST00000434521 SLC4A1APQ9BWU0 796 aaKnown RBP23.06■■□□□ 1.28
PRDM6-203ENST00000434521 RRBP1Q9P2E9 1410 aaKnown RBP23.06■■□□□ 1.28
PRDM6-203ENST00000434521 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
PRDM6-203ENST00000434521 HAP1P54257 671 aaPredicted RBP23.04■■□□□ 1.28
PRDM6-203ENST00000434521 PSME1Q06323 249 aa23.04■■□□□ 1.28
PRDM6-203ENST00000434521 PPARGC1BQ86YN6 1023 aaKnown RBP23.04■■□□□ 1.28
PRDM6-203ENST00000434521 PHF8Q9UPP1 1060 aa23.04■■□□□ 1.28
PRDM6-203ENST00000434521 CCDC9Q9Y3X0 531 aaKnown RBP23.04■■□□□ 1.28
PRDM6-203ENST00000434521 SIRT1Q96EB6 747 aa23.03■■□□□ 1.28
PRDM6-203ENST00000434521 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
PRDM6-203ENST00000434521 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
PRDM6-203ENST00000434521 FAM83GA6ND36 823 aa23.02■■□□□ 1.28
PRDM6-203ENST00000434521 FMN2Q9NZ56 1722 aa23.02■■□□□ 1.28
PRDM6-203ENST00000434521 ANKRD30BQ9BXX2 1392 aa23.01■■□□□ 1.27
PRDM6-203ENST00000434521 SPATA31E1Q6ZUB1 1445 aa23■■□□□ 1.27
PRDM6-203ENST00000434521 YTHDC2Q9H6S0 1430 aaKnown RBP22.99■■□□□ 1.27
PRDM6-203ENST00000434521 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
PRDM6-203ENST00000434521 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
PRDM6-203ENST00000434521 NWD2Q9ULI1 1742 aa22.98■■□□□ 1.27
PRDM6-203ENST00000434521 PIK3C2GO75747 1445 aa22.98■■□□□ 1.27
PRDM6-203ENST00000434521 PLEKHG5O94827 1062 aa22.97■■□□□ 1.27
PRDM6-203ENST00000434521 EN1Q05925 392 aaPredicted RBP22.97■■□□□ 1.27
PRDM6-203ENST00000434521 FAM98CQ17RN3 349 aaKnown RBP22.97■■□□□ 1.27
PRDM6-203ENST00000434521 NRXN1Q9ULB1 1477 aa22.97■■□□□ 1.27
PRDM6-203ENST00000434521 KNDC1Q76NI1 1749 aa22.96■■□□□ 1.27
PRDM6-203ENST00000434521 A0A0G2JS52 829 aa22.95■■□□□ 1.26
PRDM6-203ENST00000434521 MYT1Q01538 1121 aa22.95■■□□□ 1.26
PRDM6-203ENST00000434521 PLCH1Q4KWH8 1693 aa22.95■■□□□ 1.26
PRDM6-203ENST00000434521 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
PRDM6-203ENST00000434521 DISP2A7MBM2 1401 aa22.93■■□□□ 1.26
PRDM6-203ENST00000434521 R3HDM1Q15032 1099 aaKnown RBP22.93■■□□□ 1.26
PRDM6-203ENST00000434521 BTG4Q9NY30 223 aa22.93■■□□□ 1.26
PRDM6-203ENST00000434521 C14orf93Q9H972 538 aaKnown RBP22.92■■□□□ 1.26
PRDM6-203ENST00000434521 ABCA3Q99758 1704 aa22.89■■□□□ 1.26
PRDM6-203ENST00000434521 FAM182BQ5T319 152 aa22.89■■□□□ 1.25
PRDM6-203ENST00000434521 SPATA31A5Q5VU36 1347 aa22.88■■□□□ 1.25
PRDM6-203ENST00000434521 SPATA31A7Q8IWB4 1347 aa22.88■■□□□ 1.25
PRDM6-203ENST00000434521 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
PRDM6-203ENST00000434521 NRAPQ86VF7 1730 aa22.88■■□□□ 1.25
PRDM6-203ENST00000434521 ANKARQ7Z5J8 1434 aa22.86■■□□□ 1.25
PRDM6-203ENST00000434521 EZH2Q15910 746 aaKnown RBP22.86■■□□□ 1.25
PRDM6-203ENST00000434521 PRAM1Q96QH2 718 aa22.86■■□□□ 1.25
PRDM6-203ENST00000434521 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
PRDM6-203ENST00000434521 CAMKK2Q96RR4 588 aa22.85■■□□□ 1.25
PRDM6-203ENST00000434521 DHX57Q6P158 1386 aaKnown RBP22.85■■□□□ 1.25
PRDM6-203ENST00000434521 RGPD8O14715 1765 aaPredicted RBP22.84■■□□□ 1.25
PRDM6-203ENST00000434521 SAFB2Q14151 953 aaKnown RBP eCLIP22.84■■□□□ 1.25
PRDM6-203ENST00000434521 CFAP70Q5T0N1 1121 aa22.84■■□□□ 1.25
PRDM6-203ENST00000434521 RGPD1P0DJD0 1748 aa22.82■■□□□ 1.24
PRDM6-203ENST00000434521 MPHOSPH9Q99550 1183 aa22.81■■□□□ 1.24
PRDM6-203ENST00000434521 COL14A1Q05707 1796 aaKnown RBP22.8■■□□□ 1.24
PRDM6-203ENST00000434521 THSD7AQ9UPZ6 1657 aa22.8■■□□□ 1.24
PRDM6-203ENST00000434521 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
PRDM6-203ENST00000434521 GPRASP1Q5JY77 1395 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms