RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 ESCO1Q5FWF5 840 aa26.29■■□□□ 1.8
CNOT9-204ENST00000432877 LRPPRCP42704 1394 aaKnown RBP26.26■■□□□ 1.79
CNOT9-204ENST00000432877 ANKRD30BQ9BXX2 1392 aa26.26■■□□□ 1.79
CNOT9-204ENST00000432877 ADGRF5Q8IZF2 1346 aa26.25■■□□□ 1.79
CNOT9-204ENST00000432877 CCDC144AA2RUR9 1427 aa26.24■■□□□ 1.79
CNOT9-204ENST00000432877 ATAD2Q6PL18 1390 aa26.23■■□□□ 1.79
CNOT9-204ENST00000432877 FOXD1Q16676 465 aa26.23■■□□□ 1.79
CNOT9-204ENST00000432877 RGL3Q3MIN7 710 aa26.23■■□□□ 1.79
CNOT9-204ENST00000432877 ABCC11Q96J66 1382 aa26.22■■□□□ 1.79
CNOT9-204ENST00000432877 ACIN1Q9UKV3 1341 aaKnown RBP26.22■■□□□ 1.79
CNOT9-204ENST00000432877 FOXO3O43524 673 aa26.22■■□□□ 1.79
CNOT9-204ENST00000432877 TECPR2O15040 1411 aa26.22■■□□□ 1.79
CNOT9-204ENST00000432877 MPHOSPH9Q99550 1183 aa26.21■■□□□ 1.79
CNOT9-204ENST00000432877 STK26Q9P289 416 aa26.21■■□□□ 1.79
CNOT9-204ENST00000432877 WAPLQ7Z5K2 1190 aa26.2■■□□□ 1.78
CNOT9-204ENST00000432877 PPLO60437 1756 aa26.2■■□□□ 1.78
CNOT9-204ENST00000432877 CDC42BPGQ6DT37 1551 aa26.2■■□□□ 1.78
CNOT9-204ENST00000432877 SIRT1Q96EB6 747 aa26.19■■□□□ 1.78
CNOT9-204ENST00000432877 ATRNO75882 1429 aa26.19■■□□□ 1.78
CNOT9-204ENST00000432877 SPATA31E1Q6ZUB1 1445 aa26.19■■□□□ 1.78
CNOT9-204ENST00000432877 MYOM2P54296 1465 aa26.18■■□□□ 1.78
CNOT9-204ENST00000432877 COL22A1Q8NFW1 1626 aaPredicted RBP26.17■■□□□ 1.78
CNOT9-204ENST00000432877 CCDC125Q86Z20 511 aa26.16■■□□□ 1.78
CNOT9-204ENST00000432877 PXDNQ92626 1479 aa26.16■■□□□ 1.78
CNOT9-204ENST00000432877 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.78
CNOT9-204ENST00000432877 XPCQ01831 940 aaPredicted RBP26.13■■□□□ 1.77
CNOT9-204ENST00000432877 BCL9LQ86UU0 1499 aa26.12■■□□□ 1.77
CNOT9-204ENST00000432877 GJD4Q96KN9 370 aaPredicted RBP26.12■■□□□ 1.77
CNOT9-204ENST00000432877 NUTM2FA1L443 756 aa26.11■■□□□ 1.77
CNOT9-204ENST00000432877 PIK3C2GO75747 1445 aa26.11■■□□□ 1.77
CNOT9-204ENST00000432877 C14orf93Q9H972 538 aaKnown RBP26.1■■□□□ 1.77
CNOT9-204ENST00000432877 SPATA31A3Q5VYP0 1347 aa26.1■■□□□ 1.77
CNOT9-204ENST00000432877 PLEKHH1Q9ULM0 1364 aa26.08■■□□□ 1.77
CNOT9-204ENST00000432877 YTHDC2Q9H6S0 1430 aaKnown RBP26.08■■□□□ 1.77
CNOT9-204ENST00000432877 KRT28Q7Z3Y7 464 aa26.08■■□□□ 1.77
CNOT9-204ENST00000432877 UNC5CLQ8IV45 518 aa26.08■■□□□ 1.77
CNOT9-204ENST00000432877 PSME1Q06323 249 aa26.07■■□□□ 1.76
CNOT9-204ENST00000432877 ZRANB1Q9UGI0 708 aa26.05■■□□□ 1.76
CNOT9-204ENST00000432877 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
CNOT9-204ENST00000432877 PHF8Q9UPP1 1060 aa26.03■■□□□ 1.76
CNOT9-204ENST00000432877 SLIT2O94813 1529 aa26■■□□□ 1.75
CNOT9-204ENST00000432877 KNDC1Q76NI1 1749 aa26■■□□□ 1.75
CNOT9-204ENST00000432877 CFAP70Q5T0N1 1121 aa25.99■■□□□ 1.75
CNOT9-204ENST00000432877 HAP1P54257 671 aaPredicted RBP25.98■■□□□ 1.75
CNOT9-204ENST00000432877 IFT172Q9UG01 1749 aa25.97■■□□□ 1.75
CNOT9-204ENST00000432877 SBNO1A3KN83 1393 aa25.97■■□□□ 1.75
CNOT9-204ENST00000432877 NRXN1Q9ULB1 1477 aa25.97■■□□□ 1.75
CNOT9-204ENST00000432877 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
CNOT9-204ENST00000432877 PRAM1Q96QH2 718 aa25.96■■□□□ 1.75
CNOT9-204ENST00000432877 VPS72Q15906 364 aa25.95■■□□□ 1.74
CNOT9-204ENST00000432877 RALGAPBQ86X10 1494 aa25.95■■□□□ 1.74
CNOT9-204ENST00000432877 TNS3Q68CZ2 1445 aa25.95■■□□□ 1.74
CNOT9-204ENST00000432877 FMN2Q9NZ56 1722 aa25.94■■□□□ 1.74
CNOT9-204ENST00000432877 POGKQ9P215 609 aa25.94■■□□□ 1.74
CNOT9-204ENST00000432877 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
CNOT9-204ENST00000432877 ARHGEF10O15013 1369 aa25.94■■□□□ 1.74
CNOT9-204ENST00000432877 ONECUT3O60422 494 aaPredicted RBP25.93■■□□□ 1.74
CNOT9-204ENST00000432877 BLMP54132 1417 aaPredicted RBP25.9■■□□□ 1.74
CNOT9-204ENST00000432877 SEPT12Q8IYM1 358 aa25.9■■□□□ 1.74
CNOT9-204ENST00000432877 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.9■■□□□ 1.74
CNOT9-204ENST00000432877 SAFB2Q14151 953 aaKnown RBP eCLIP25.89■■□□□ 1.74
CNOT9-204ENST00000432877 LMOD2Q6P5Q4 547 aa25.89■■□□□ 1.74
CNOT9-204ENST00000432877 CABLES1Q8TDN4 633 aa25.89■■□□□ 1.74
CNOT9-204ENST00000432877 STAC3Q96MF2 364 aa25.89■■□□□ 1.74
CNOT9-204ENST00000432877 ANKARQ7Z5J8 1434 aa25.88■■□□□ 1.73
CNOT9-204ENST00000432877 SF3B2Q13435 895 aaKnown RBP25.88■■□□□ 1.73
CNOT9-204ENST00000432877 SRCAPQ6ZRS2 3230 aa25.88■■□□□ 1.73
CNOT9-204ENST00000432877 USP32Q8NFA0 1604 aa25.87■■□□□ 1.73
CNOT9-204ENST00000432877 DLC1Q96QB1 1528 aa25.87■■□□□ 1.73
CNOT9-204ENST00000432877 EP400Q96L91 3159 aa25.87■■□□□ 1.73
CNOT9-204ENST00000432877 GLI3P10071 1580 aa25.86■■□□□ 1.73
CNOT9-204ENST00000432877 FAM83GA6ND36 823 aa25.85■■□□□ 1.73
CNOT9-204ENST00000432877 PMFBP1Q8TBY8 1022 aa25.85■■□□□ 1.73
CNOT9-204ENST00000432877 CCDC9Q9Y3X0 531 aaKnown RBP25.85■■□□□ 1.73
CNOT9-204ENST00000432877 EIF3AQ14152 1382 aaKnown RBP25.83■■□□□ 1.73
CNOT9-204ENST00000432877 KRT27Q7Z3Y8 459 aa25.83■■□□□ 1.73
CNOT9-204ENST00000432877 GPRASP1Q5JY77 1395 aa25.82■■□□□ 1.72
CNOT9-204ENST00000432877 TRAK1Q9UPV9 953 aa25.81■■□□□ 1.72
CNOT9-204ENST00000432877 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
CNOT9-204ENST00000432877 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
CNOT9-204ENST00000432877 WASLO00401 505 aaPredicted RBP25.78■■□□□ 1.72
CNOT9-204ENST00000432877 DEFB132Q7Z7B7 95 aa25.77■■□□□ 1.72
CNOT9-204ENST00000432877 DCAF11Q8TEB1 546 aa25.77■■□□□ 1.72
CNOT9-204ENST00000432877 HIRIP3Q9BW71 556 aaPredicted RBP25.77■■□□□ 1.72
CNOT9-204ENST00000432877 BTG4Q9NY30 223 aa25.76■■□□□ 1.71
CNOT9-204ENST00000432877 KDM2AQ9Y2K7 1162 aa25.76■■□□□ 1.71
CNOT9-204ENST00000432877 NWD2Q9ULI1 1742 aa25.75■■□□□ 1.71
CNOT9-204ENST00000432877 ADGRB1O14514 1584 aa25.75■■□□□ 1.71
CNOT9-204ENST00000432877 ADGRB2O60241 1585 aa25.75■■□□□ 1.71
CNOT9-204ENST00000432877 MINK1Q8N4C8 1332 aaPredicted RBP25.75■■□□□ 1.71
CNOT9-204ENST00000432877 HRCP23327 699 aa25.74■■□□□ 1.71
CNOT9-204ENST00000432877 NGDNQ8NEJ9 315 aaKnown RBP25.74■■□□□ 1.71
CNOT9-204ENST00000432877 RGPD8O14715 1765 aaPredicted RBP25.74■■□□□ 1.71
CNOT9-204ENST00000432877 PRR36Q9H6K5 1346 aa25.72■■□□□ 1.71
CNOT9-204ENST00000432877 A0A0G2JS52 829 aa25.71■■□□□ 1.71
CNOT9-204ENST00000432877 BAG6P46379 1132 aa25.71■■□□□ 1.71
CNOT9-204ENST00000432877 MYT1Q01538 1121 aa25.71■■□□□ 1.71
CNOT9-204ENST00000432877 FAM98CQ17RN3 349 aaKnown RBP25.71■■□□□ 1.71
CNOT9-204ENST00000432877 TULP4Q9NRJ4 1543 aa25.69■■□□□ 1.7
CNOT9-204ENST00000432877 PAK3O75914 559 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms