RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 NPHP3Q7Z494 1330 aa22.26■■□□□ 1.15
PRKDC-203ENST00000432581 ADGRF5Q8IZF2 1346 aa22.26■■□□□ 1.15
PRKDC-203ENST00000432581 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
PRKDC-203ENST00000432581 ESCO1Q5FWF5 840 aa22.25■■□□□ 1.15
PRKDC-203ENST00000432581 RGL3Q3MIN7 710 aa22.24■■□□□ 1.15
PRKDC-203ENST00000432581 TECPR2O15040 1411 aa22.23■■□□□ 1.15
PRKDC-203ENST00000432581 SPATA31E1Q6ZUB1 1445 aa22.23■■□□□ 1.15
PRKDC-203ENST00000432581 USP21Q9UK80 565 aa22.23■■□□□ 1.15
PRKDC-203ENST00000432581 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
PRKDC-203ENST00000432581 FNBP4Q8N3X1 1017 aaPredicted RBP22.22■■□□□ 1.15
PRKDC-203ENST00000432581 MPHOSPH9Q99550 1183 aa22.22■■□□□ 1.15
PRKDC-203ENST00000432581 TRPC5Q9UL62 973 aaPredicted RBP22.22■■□□□ 1.15
PRKDC-203ENST00000432581 STK26Q9P289 416 aa22.21■■□□□ 1.15
PRKDC-203ENST00000432581 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
PRKDC-203ENST00000432581 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
PRKDC-203ENST00000432581 MYOM2P54296 1465 aa22.19■■□□□ 1.14
PRKDC-203ENST00000432581 COL22A1Q8NFW1 1626 aaPredicted RBP22.19■■□□□ 1.14
PRKDC-203ENST00000432581 PXDNQ92626 1479 aa22.18■■□□□ 1.14
PRKDC-203ENST00000432581 ACIN1Q9UKV3 1341 aaKnown RBP22.18■■□□□ 1.14
PRKDC-203ENST00000432581 FOXO3O43524 673 aa22.18■■□□□ 1.14
PRKDC-203ENST00000432581 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
PRKDC-203ENST00000432581 ATRNO75882 1429 aa22.16■■□□□ 1.14
PRKDC-203ENST00000432581 ATAD2Q6PL18 1390 aa22.16■■□□□ 1.14
PRKDC-203ENST00000432581 TMEM132EQ6IEE7 984 aa22.16■■□□□ 1.14
PRKDC-203ENST00000432581 XPCQ01831 940 aaPredicted RBP22.14■■□□□ 1.13
PRKDC-203ENST00000432581 YTHDC2Q9H6S0 1430 aaKnown RBP22.14■■□□□ 1.13
PRKDC-203ENST00000432581 PLEKHH1Q9ULM0 1364 aa22.13■■□□□ 1.13
PRKDC-203ENST00000432581 NUTM2FA1L443 756 aa22.13■■□□□ 1.13
PRKDC-203ENST00000432581 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
PRKDC-203ENST00000432581 IFT172Q9UG01 1749 aa22.12■■□□□ 1.13
PRKDC-203ENST00000432581 KNDC1Q76NI1 1749 aa22.11■■□□□ 1.13
PRKDC-203ENST00000432581 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
PRKDC-203ENST00000432581 BCL9LQ86UU0 1499 aa22.09■■□□□ 1.13
PRKDC-203ENST00000432581 SPATA31A3Q5VYP0 1347 aa22.08■■□□□ 1.13
PRKDC-203ENST00000432581 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
PRKDC-203ENST00000432581 GJD4Q96KN9 370 aaPredicted RBP22.06■■□□□ 1.12
PRKDC-203ENST00000432581 NRXN1Q9ULB1 1477 aa22.06■■□□□ 1.12
PRKDC-203ENST00000432581 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
PRKDC-203ENST00000432581 KIF1AQ12756 1690 aa22.05■■□□□ 1.12
PRKDC-203ENST00000432581 KRT28Q7Z3Y7 464 aa22.05■■□□□ 1.12
PRKDC-203ENST00000432581 PSME1Q06323 249 aa22.03■■□□□ 1.12
PRKDC-203ENST00000432581 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
PRKDC-203ENST00000432581 UNC5CLQ8IV45 518 aa22.03■■□□□ 1.12
PRKDC-203ENST00000432581 PHF8Q9UPP1 1060 aa22.03■■□□□ 1.12
PRKDC-203ENST00000432581 CCDC125Q86Z20 511 aa22.02■■□□□ 1.12
PRKDC-203ENST00000432581 MARF1Q9Y4F3 1742 aaKnown RBP22.01■■□□□ 1.11
PRKDC-203ENST00000432581 SLIT2O94813 1529 aa22.01■■□□□ 1.11
PRKDC-203ENST00000432581 TNS3Q68CZ2 1445 aa22■■□□□ 1.11
PRKDC-203ENST00000432581 PRAM1Q96QH2 718 aa22■■□□□ 1.11
PRKDC-203ENST00000432581 HAP1P54257 671 aaPredicted RBP21.99■■□□□ 1.11
PRKDC-203ENST00000432581 SBNO1A3KN83 1393 aa21.98■■□□□ 1.11
PRKDC-203ENST00000432581 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
PRKDC-203ENST00000432581 RALGAPBQ86X10 1494 aa21.97■■□□□ 1.11
PRKDC-203ENST00000432581 SAFB2Q14151 953 aaKnown RBP eCLIP21.97■■□□□ 1.11
PRKDC-203ENST00000432581 POGKQ9P215 609 aa21.97■■□□□ 1.11
PRKDC-203ENST00000432581 DLC1Q96QB1 1528 aa21.96■■□□□ 1.11
PRKDC-203ENST00000432581 USP32Q8NFA0 1604 aa21.96■■□□□ 1.11
PRKDC-203ENST00000432581 ZRANB1Q9UGI0 708 aa21.96■■□□□ 1.11
PRKDC-203ENST00000432581 ARHGEF10O15013 1369 aa21.96■■□□□ 1.11
PRKDC-203ENST00000432581 ANKARQ7Z5J8 1434 aa21.96■■□□□ 1.11
PRKDC-203ENST00000432581 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
PRKDC-203ENST00000432581 GLI3P10071 1580 aa21.92■■□□□ 1.1
PRKDC-203ENST00000432581 VPS72Q15906 364 aa21.92■■□□□ 1.1
PRKDC-203ENST00000432581 LMOD2Q6P5Q4 547 aa21.92■■□□□ 1.1
PRKDC-203ENST00000432581 CABLES1Q8TDN4 633 aa21.92■■□□□ 1.1
PRKDC-203ENST00000432581 EP400Q96L91 3159 aa21.92■■□□□ 1.1
PRKDC-203ENST00000432581 EIF3AQ14152 1382 aaKnown RBP21.9■■□□□ 1.1
PRKDC-203ENST00000432581 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
PRKDC-203ENST00000432581 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
PRKDC-203ENST00000432581 ADGRB1O14514 1584 aa21.9■■□□□ 1.1
PRKDC-203ENST00000432581 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
PRKDC-203ENST00000432581 BLMP54132 1417 aaPredicted RBP21.89■■□□□ 1.1
PRKDC-203ENST00000432581 STAC3Q96MF2 364 aa21.89■■□□□ 1.09
PRKDC-203ENST00000432581 TRAK1Q9UPV9 953 aa21.89■■□□□ 1.09
PRKDC-203ENST00000432581 SEPT12Q8IYM1 358 aa21.88■■□□□ 1.09
PRKDC-203ENST00000432581 PLEKHG5O94827 1062 aa21.87■■□□□ 1.09
PRKDC-203ENST00000432581 CCDC9Q9Y3X0 531 aaKnown RBP21.87■■□□□ 1.09
PRKDC-203ENST00000432581 RGPD8O14715 1765 aaPredicted RBP21.87■■□□□ 1.09
PRKDC-203ENST00000432581 GPRASP1Q5JY77 1395 aa21.87■■□□□ 1.09
PRKDC-203ENST00000432581 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
PRKDC-203ENST00000432581 HIRIP3Q9BW71 556 aaPredicted RBP21.86■■□□□ 1.09
PRKDC-203ENST00000432581 DCAF11Q8TEB1 546 aa21.85■■□□□ 1.09
PRKDC-203ENST00000432581 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
PRKDC-203ENST00000432581 MINK1Q8N4C8 1332 aaPredicted RBP21.84■■□□□ 1.09
PRKDC-203ENST00000432581 NWD2Q9ULI1 1742 aa21.84■■□□□ 1.09
PRKDC-203ENST00000432581 FAM83GA6ND36 823 aa21.84■■□□□ 1.09
PRKDC-203ENST00000432581 SF3B2Q13435 895 aaKnown RBP21.84■■□□□ 1.09
PRKDC-203ENST00000432581 WASLO00401 505 aaPredicted RBP21.83■■□□□ 1.09
PRKDC-203ENST00000432581 TULP4Q9NRJ4 1543 aa21.82■■□□□ 1.08
PRKDC-203ENST00000432581 PLCH1Q4KWH8 1693 aa21.82■■□□□ 1.08
PRKDC-203ENST00000432581 PRR36Q9H6K5 1346 aa21.81■■□□□ 1.08
PRKDC-203ENST00000432581 ABCA3Q99758 1704 aa21.81■■□□□ 1.08
PRKDC-203ENST00000432581 KRT27Q7Z3Y8 459 aa21.81■■□□□ 1.08
PRKDC-203ENST00000432581 HRCP23327 699 aa21.8■■□□□ 1.08
PRKDC-203ENST00000432581 NGDNQ8NEJ9 315 aaKnown RBP21.79■■□□□ 1.08
PRKDC-203ENST00000432581 BTG4Q9NY30 223 aa21.78■■□□□ 1.08
PRKDC-203ENST00000432581 TRPM3Q9HCF6 1732 aaPredicted RBP21.77■■□□□ 1.08
PRKDC-203ENST00000432581 A0A0G2JS52 829 aa21.77■■□□□ 1.08
PRKDC-203ENST00000432581 MYT1Q01538 1121 aa21.77■■□□□ 1.08
PRKDC-203ENST00000432581 DEFB132Q7Z7B7 95 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms