RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 PHLPP1O60346 1717 aa22.2■■□□□ 1.14
TSPAN9-203ENST00000431374 PRAM1Q96QH2 718 aa22.19■■□□□ 1.14
TSPAN9-203ENST00000431374 SIN3AQ96ST3 1273 aa22.19■■□□□ 1.14
TSPAN9-203ENST00000431374 DLC1Q96QB1 1528 aa22.19■■□□□ 1.14
TSPAN9-203ENST00000431374 ORAI2Q96SN7 254 aa22.17■■□□□ 1.14
TSPAN9-203ENST00000431374 TRAK1Q9UPV9 953 aa22.16■■□□□ 1.14
TSPAN9-203ENST00000431374 ILDR2Q71H61 639 aa22.15■■□□□ 1.14
TSPAN9-203ENST00000431374 DDX17Q92841 729 aaKnown RBP22.15■■□□□ 1.14
TSPAN9-203ENST00000431374 L3MBTL2Q969R5 705 aa22.15■■□□□ 1.14
TSPAN9-203ENST00000431374 SAFB2Q14151 953 aaKnown RBP eCLIP22.14■■□□□ 1.13
TSPAN9-203ENST00000431374 PHF23Q9BUL5 403 aaPredicted RBP22.14■■□□□ 1.13
TSPAN9-203ENST00000431374 POGKQ9P215 609 aa22.14■■□□□ 1.13
TSPAN9-203ENST00000431374 NEUROD1Q13562 356 aa22.13■■□□□ 1.13
TSPAN9-203ENST00000431374 NHSL1Q5SYE7 1610 aa22.12■■□□□ 1.13
TSPAN9-203ENST00000431374 NUTM2FA1L443 756 aa22.11■■□□□ 1.13
TSPAN9-203ENST00000431374 ESCO1Q5FWF5 840 aa22.11■■□□□ 1.13
TSPAN9-203ENST00000431374 SPATA31A6Q5VVP1 1343 aa22.1■■□□□ 1.13
TSPAN9-203ENST00000431374 LRRC59Q96AG4 307 aaKnown RBP22.09■■□□□ 1.13
TSPAN9-203ENST00000431374 SOS2Q07890 1332 aaPredicted RBP22.08■■□□□ 1.13
TSPAN9-203ENST00000431374 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.13
TSPAN9-203ENST00000431374 NPHP3Q7Z494 1330 aa22.06■■□□□ 1.12
TSPAN9-203ENST00000431374 ADGRB2O60241 1585 aa22.05■■□□□ 1.12
TSPAN9-203ENST00000431374 RGS17Q9UGC6 210 aaPredicted RBP22.05■■□□□ 1.12
TSPAN9-203ENST00000431374 FMN2Q9NZ56 1722 aa22.05■■□□□ 1.12
TSPAN9-203ENST00000431374 KIAA1210Q9ULL0 1709 aa22.05■■□□□ 1.12
TSPAN9-203ENST00000431374 LRP6O75581 1613 aa22.05■■□□□ 1.12
TSPAN9-203ENST00000431374 MINK1Q8N4C8 1332 aaPredicted RBP22.05■■□□□ 1.12
TSPAN9-203ENST00000431374 SHPRHQ149N8 1683 aa22.04■■□□□ 1.12
TSPAN9-203ENST00000431374 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
TSPAN9-203ENST00000431374 HIRIP3Q9BW71 556 aaPredicted RBP22.04■■□□□ 1.12
TSPAN9-203ENST00000431374 FOXO3O43524 673 aa22.03■■□□□ 1.12
TSPAN9-203ENST00000431374 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.12
TSPAN9-203ENST00000431374 PXDNQ92626 1479 aa22.02■■□□□ 1.12
TSPAN9-203ENST00000431374 WASLO00401 505 aaPredicted RBP22■■□□□ 1.11
TSPAN9-203ENST00000431374 NUTM2BA6NNL0 878 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-203ENST00000431374 NUTM2EB1AL46 878 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-203ENST00000431374 XPCQ01831 940 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-203ENST00000431374 NUTM2AQ8IVF1 878 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-203ENST00000431374 PHF8Q9UPP1 1060 aa21.99■■□□□ 1.11
TSPAN9-203ENST00000431374 EIF3AQ14152 1382 aaKnown RBP21.99■■□□□ 1.11
TSPAN9-203ENST00000431374 ARHGEF28Q8N1W1 1705 aaKnown RBP21.98■■□□□ 1.11
TSPAN9-203ENST00000431374 MEX3CQ5U5Q3 659 aaKnown RBP21.98■■□□□ 1.11
TSPAN9-203ENST00000431374 PRR36Q9H6K5 1346 aa21.97■■□□□ 1.11
TSPAN9-203ENST00000431374 TONSLQ96HA7 1378 aa21.96■■□□□ 1.11
TSPAN9-203ENST00000431374 TULP4Q9NRJ4 1543 aa21.96■■□□□ 1.11
TSPAN9-203ENST00000431374 KIF1AQ12756 1690 aa21.95■■□□□ 1.1
TSPAN9-203ENST00000431374 NBPF8Q3BBV2 869 aa21.95■■□□□ 1.1
TSPAN9-203ENST00000431374 USP32Q8NFA0 1604 aa21.94■■□□□ 1.1
TSPAN9-203ENST00000431374 ROCK2O75116 1388 aaKnown RBP21.93■■□□□ 1.1
TSPAN9-203ENST00000431374 POTEAQ6S8J7 498 aa21.93■■□□□ 1.1
TSPAN9-203ENST00000431374 KRT28Q7Z3Y7 464 aa21.93■■□□□ 1.1
TSPAN9-203ENST00000431374 PCGF6Q9BYE7 350 aa21.93■■□□□ 1.1
TSPAN9-203ENST00000431374 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
TSPAN9-203ENST00000431374 SOCS7O14512 581 aa21.92■■□□□ 1.1
TSPAN9-203ENST00000431374 PMFBP1Q8TBY8 1022 aa21.92■■□□□ 1.1
TSPAN9-203ENST00000431374 TRPM1Q7Z4N2 1603 aa21.91■■□□□ 1.1
TSPAN9-203ENST00000431374 SPATA31A3Q5VYP0 1347 aa21.91■■□□□ 1.1
TSPAN9-203ENST00000431374 CDK19Q9BWU1 502 aa21.91■■□□□ 1.1
TSPAN9-203ENST00000431374 GPRASP1Q5JY77 1395 aa21.9■■□□□ 1.1
TSPAN9-203ENST00000431374 ATP7BP35670 1465 aa21.9■■□□□ 1.1
TSPAN9-203ENST00000431374 PSME1Q06323 249 aa21.89■■□□□ 1.09
TSPAN9-203ENST00000431374 NUDT16Q96DE0 195 aaKnown RBP21.89■■□□□ 1.09
TSPAN9-203ENST00000431374 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
TSPAN9-203ENST00000431374 COL22A1Q8NFW1 1626 aaPredicted RBP21.88■■□□□ 1.09
TSPAN9-203ENST00000431374 ADAMTS2O95450 1211 aa21.87■■□□□ 1.09
TSPAN9-203ENST00000431374 ZNF772Q68DY9 489 aaPredicted RBP21.87■■□□□ 1.09
TSPAN9-203ENST00000431374 TNS3Q68CZ2 1445 aa21.87■■□□□ 1.09
TSPAN9-203ENST00000431374 C8orf37Q96NL8 207 aa21.86■■□□□ 1.09
TSPAN9-203ENST00000431374 AFF2P51816 1311 aa21.85■■□□□ 1.09
TSPAN9-203ENST00000431374 RGPD8O14715 1765 aaPredicted RBP21.85■■□□□ 1.09
TSPAN9-203ENST00000431374 RALGAPBQ86X10 1494 aa21.84■■□□□ 1.09
TSPAN9-203ENST00000431374 NGDNQ8NEJ9 315 aaKnown RBP21.83■■□□□ 1.09
TSPAN9-203ENST00000431374 CCDC61Q9Y6R9 512 aa21.83■■□□□ 1.09
TSPAN9-203ENST00000431374 CARD11Q9BXL7 1154 aa21.82■■□□□ 1.08
TSPAN9-203ENST00000431374 SRPK2P78362 688 aaKnown RBP21.81■■□□□ 1.08
TSPAN9-203ENST00000431374 NGLY1Q96IV0 654 aa21.81■■□□□ 1.08
TSPAN9-203ENST00000431374 ARHGEF10O15013 1369 aa21.81■■□□□ 1.08
TSPAN9-203ENST00000431374 CLSPNQ9HAW4 1339 aa21.8■■□□□ 1.08
TSPAN9-203ENST00000431374 CABP2Q9NPB3 220 aa21.8■■□□□ 1.08
TSPAN9-203ENST00000431374 PLEKHG3A1L390 1219 aa21.79■■□□□ 1.08
TSPAN9-203ENST00000431374 QRICH2Q9H0J4 1663 aa21.79■■□□□ 1.08
TSPAN9-203ENST00000431374 POLR3AO14802 1390 aaPredicted RBP21.78■■□□□ 1.08
TSPAN9-203ENST00000431374 LMOD2Q6P5Q4 547 aa21.78■■□□□ 1.08
TSPAN9-203ENST00000431374 FNBP4Q8N3X1 1017 aaPredicted RBP21.78■■□□□ 1.08
TSPAN9-203ENST00000431374 ACEP12821 1306 aa21.77■■□□□ 1.07
TSPAN9-203ENST00000431374 EVC2Q86UK5 1308 aa21.77■■□□□ 1.07
TSPAN9-203ENST00000431374 CABLES1Q8TDN4 633 aa21.76■■□□□ 1.07
TSPAN9-203ENST00000431374 TOPAZ1Q8N9V7 1692 aa21.75■■□□□ 1.07
TSPAN9-203ENST00000431374 ITSN1Q15811 1721 aa21.75■■□□□ 1.07
TSPAN9-203ENST00000431374 TRPM3Q9HCF6 1732 aaPredicted RBP21.75■■□□□ 1.07
TSPAN9-203ENST00000431374 PPIP5K1Q6PFW1 1433 aa21.74■■□□□ 1.07
TSPAN9-203ENST00000431374 RXRBP28702 533 aa21.74■■□□□ 1.07
TSPAN9-203ENST00000431374 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
TSPAN9-203ENST00000431374 PAK3O75914 559 aaPredicted RBP21.73■■□□□ 1.07
TSPAN9-203ENST00000431374 QTRT2Q9H974 415 aaKnown RBP21.73■■□□□ 1.07
TSPAN9-203ENST00000431374 USP21Q9UK80 565 aa21.73■■□□□ 1.07
TSPAN9-203ENST00000431374 PLEKHG5O94827 1062 aa21.72■■□□□ 1.07
TSPAN9-203ENST00000431374 HAP1P54257 671 aaPredicted RBP21.72■■□□□ 1.07
TSPAN9-203ENST00000431374 TIMELESSQ9UNS1 1208 aa21.72■■□□□ 1.07
TSPAN9-203ENST00000431374 CABP1Q9NZU7 370 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms