RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-207ENST00000430858 COL16A1Q07092 1604 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-207ENST00000430858 DLC1Q96QB1 1528 aa14.2□□□□□ -0.14
HDAC6-207ENST00000430858 PRAM1Q96QH2 718 aa14.2□□□□□ -0.14
HDAC6-207ENST00000430858 ORAI2Q96SN7 254 aa14.2□□□□□ -0.14
HDAC6-207ENST00000430858 POGKQ9P215 609 aa14.19□□□□□ -0.14
HDAC6-207ENST00000430858 TRAK1Q9UPV9 953 aa14.19□□□□□ -0.14
HDAC6-207ENST00000430858 SPATA31A6Q5VVP1 1343 aa14.18□□□□□ -0.14
HDAC6-207ENST00000430858 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
HDAC6-207ENST00000430858 SIN3AQ96ST3 1273 aa14.18□□□□□ -0.14
HDAC6-207ENST00000430858 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
HDAC6-207ENST00000430858 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
HDAC6-207ENST00000430858 ILDR2Q71H61 639 aa14.17□□□□□ -0.14
HDAC6-207ENST00000430858 L3MBTL2Q969R5 705 aa14.17□□□□□ -0.14
HDAC6-207ENST00000430858 NHSL1Q5SYE7 1610 aa14.16□□□□□ -0.14
HDAC6-207ENST00000430858 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
HDAC6-207ENST00000430858 DDX17Q92841 729 aaKnown RBP14.16□□□□□ -0.14
HDAC6-207ENST00000430858 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.14
HDAC6-207ENST00000430858 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
HDAC6-207ENST00000430858 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.15
HDAC6-207ENST00000430858 SHPRHQ149N8 1683 aa14.13□□□□□ -0.15
HDAC6-207ENST00000430858 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
HDAC6-207ENST00000430858 FOXO3O43524 673 aa14.12□□□□□ -0.15
HDAC6-207ENST00000430858 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
HDAC6-207ENST00000430858 FMN2Q9NZ56 1722 aa14.12□□□□□ -0.15
HDAC6-207ENST00000430858 MINK1Q8N4C8 1332 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-207ENST00000430858 EIF3AQ14152 1382 aaKnown RBP14.11□□□□□ -0.15
HDAC6-207ENST00000430858 PNPLA6Q8IY17 1366 aa14.11□□□□□ -0.15
HDAC6-207ENST00000430858 ADGRB2O60241 1585 aa14.11□□□□□ -0.15
HDAC6-207ENST00000430858 ANKARQ7Z5J8 1434 aa14.11□□□□□ -0.15
HDAC6-207ENST00000430858 RGS17Q9UGC6 210 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-207ENST00000430858 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
HDAC6-207ENST00000430858 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-207ENST00000430858 LRP6O75581 1613 aa14.09□□□□□ -0.15
HDAC6-207ENST00000430858 NUTM2BA6NNL0 878 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-207ENST00000430858 NUTM2EB1AL46 878 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-207ENST00000430858 WASLO00401 505 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-207ENST00000430858 NUTM2AQ8IVF1 878 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-207ENST00000430858 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
HDAC6-207ENST00000430858 PXDNQ92626 1479 aa14.08□□□□□ -0.16
HDAC6-207ENST00000430858 KIF1AQ12756 1690 aa14.07□□□□□ -0.16
HDAC6-207ENST00000430858 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
HDAC6-207ENST00000430858 XPCQ01831 940 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-207ENST00000430858 TONSLQ96HA7 1378 aa14.07□□□□□ -0.16
HDAC6-207ENST00000430858 SOCS7O14512 581 aa14.06□□□□□ -0.16
HDAC6-207ENST00000430858 PSME1Q06323 249 aa14.06□□□□□ -0.16
HDAC6-207ENST00000430858 TULP4Q9NRJ4 1543 aa14.05□□□□□ -0.16
HDAC6-207ENST00000430858 ZNF772Q68DY9 489 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-207ENST00000430858 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
HDAC6-207ENST00000430858 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
HDAC6-207ENST00000430858 ROCK2O75116 1388 aaKnown RBP14.05□□□□□ -0.16
HDAC6-207ENST00000430858 POTEAQ6S8J7 498 aa14.04□□□□□ -0.16
HDAC6-207ENST00000430858 PMFBP1Q8TBY8 1022 aa14.04□□□□□ -0.16
HDAC6-207ENST00000430858 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
HDAC6-207ENST00000430858 PRR36Q9H6K5 1346 aa14.04□□□□□ -0.16
HDAC6-207ENST00000430858 NBPF8Q3BBV2 869 aa14.03□□□□□ -0.16
HDAC6-207ENST00000430858 CDK19Q9BWU1 502 aa14.03□□□□□ -0.16
HDAC6-207ENST00000430858 USP32Q8NFA0 1604 aa14.03□□□□□ -0.16
HDAC6-207ENST00000430858 TRPM1Q7Z4N2 1603 aa14.02□□□□□ -0.16
HDAC6-207ENST00000430858 SBNO1A3KN83 1393 aa14.02□□□□□ -0.17
HDAC6-207ENST00000430858 NUDT16Q96DE0 195 aaKnown RBP14.02□□□□□ -0.17
HDAC6-207ENST00000430858 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
HDAC6-207ENST00000430858 COL22A1Q8NFW1 1626 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-207ENST00000430858 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
HDAC6-207ENST00000430858 ADAMTS2O95450 1211 aa14.01□□□□□ -0.17
HDAC6-207ENST00000430858 C8orf37Q96NL8 207 aa14.01□□□□□ -0.17
HDAC6-207ENST00000430858 RGPD8O14715 1765 aaPredicted RBP14.01□□□□□ -0.17
HDAC6-207ENST00000430858 ATP7BP35670 1465 aa14□□□□□ -0.17
HDAC6-207ENST00000430858 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
HDAC6-207ENST00000430858 AFF2P51816 1311 aa14□□□□□ -0.17
HDAC6-207ENST00000430858 CCDC61Q9Y6R9 512 aa14□□□□□ -0.17
HDAC6-207ENST00000430858 NGDNQ8NEJ9 315 aaKnown RBP13.99□□□□□ -0.17
HDAC6-207ENST00000430858 NGLY1Q96IV0 654 aa13.99□□□□□ -0.17
HDAC6-207ENST00000430858 ARHGEF10O15013 1369 aa13.98□□□□□ -0.17
HDAC6-207ENST00000430858 CLSPNQ9HAW4 1339 aa13.98□□□□□ -0.17
HDAC6-207ENST00000430858 SRPK2P78362 688 aaKnown RBP13.98□□□□□ -0.17
HDAC6-207ENST00000430858 CARD11Q9BXL7 1154 aa13.98□□□□□ -0.17
HDAC6-207ENST00000430858 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
HDAC6-207ENST00000430858 EVC2Q86UK5 1308 aa13.96□□□□□ -0.17
HDAC6-207ENST00000430858 PLEKHG3A1L390 1219 aa13.96□□□□□ -0.17
HDAC6-207ENST00000430858 LMOD2Q6P5Q4 547 aa13.96□□□□□ -0.17
HDAC6-207ENST00000430858 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-207ENST00000430858 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.18
HDAC6-207ENST00000430858 RXRBP28702 533 aa13.95□□□□□ -0.18
HDAC6-207ENST00000430858 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-207ENST00000430858 CABP2Q9NPB3 220 aa13.95□□□□□ -0.18
HDAC6-207ENST00000430858 ITSN1Q15811 1721 aa13.95□□□□□ -0.18
HDAC6-207ENST00000430858 QRICH2Q9H0J4 1663 aa13.95□□□□□ -0.18
HDAC6-207ENST00000430858 QTRT2Q9H974 415 aaKnown RBP13.94□□□□□ -0.18
HDAC6-207ENST00000430858 USP21Q9UK80 565 aa13.94□□□□□ -0.18
HDAC6-207ENST00000430858 TIMELESSQ9UNS1 1208 aa13.94□□□□□ -0.18
HDAC6-207ENST00000430858 ACEP12821 1306 aa13.93□□□□□ -0.18
HDAC6-207ENST00000430858 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-207ENST00000430858 PPIP5K1Q6PFW1 1433 aa13.92□□□□□ -0.18
HDAC6-207ENST00000430858 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
HDAC6-207ENST00000430858 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-207ENST00000430858 SBNO2Q9Y2G9 1366 aa13.92□□□□□ -0.18
HDAC6-207ENST00000430858 TRPM3Q9HCF6 1732 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-207ENST00000430858 TOPAZ1Q8N9V7 1692 aa13.91□□□□□ -0.18
HDAC6-207ENST00000430858 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms