RNA–Protein interactions for RNA: ENST00000430705.5

PTPRA-206, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 733 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-206ENST00000430705 MEX3CQ5U5Q3 659 aaKnown RBP24.19■■□□□ 1.46
PTPRA-206ENST00000430705 TMEM132EQ6IEE7 984 aa24.19■■□□□ 1.46
PTPRA-206ENST00000430705 NUTM2BA6NNL0 878 aaPredicted RBP24.18■■□□□ 1.46
PTPRA-206ENST00000430705 NUTM2EB1AL46 878 aaPredicted RBP24.18■■□□□ 1.46
PTPRA-206ENST00000430705 NUTM2AQ8IVF1 878 aaPredicted RBP24.18■■□□□ 1.46
PTPRA-206ENST00000430705 LRRC59Q96AG4 307 aaKnown RBP24.18■■□□□ 1.46
PTPRA-206ENST00000430705 COL22A1Q8NFW1 1626 aaPredicted RBP24.17■■□□□ 1.46
PTPRA-206ENST00000430705 SOS2Q07890 1332 aaPredicted RBP24.17■■□□□ 1.46
PTPRA-206ENST00000430705 ACIN1Q9UKV3 1341 aaKnown RBP24.17■■□□□ 1.46
PTPRA-206ENST00000430705 WAPLQ7Z5K2 1190 aa24.17■■□□□ 1.46
PTPRA-206ENST00000430705 STK26Q9P289 416 aa24.17■■□□□ 1.46
PTPRA-206ENST00000430705 PXDNQ92626 1479 aa24.16■■□□□ 1.46
PTPRA-206ENST00000430705 ZNF772Q68DY9 489 aaPredicted RBP24.12■■□□□ 1.45
PTPRA-206ENST00000430705 C14orf93Q9H972 538 aaKnown RBP24.12■■□□□ 1.45
PTPRA-206ENST00000430705 ADGRB1O14514 1584 aa24.12■■□□□ 1.45
PTPRA-206ENST00000430705 AFF2P51816 1311 aa24.11■■□□□ 1.45
PTPRA-206ENST00000430705 CFAP70Q5T0N1 1121 aa24.1■■□□□ 1.45
PTPRA-206ENST00000430705 KIF1AQ12756 1690 aa24.08■■□□□ 1.44
PTPRA-206ENST00000430705 RGPD8O14715 1765 aaPredicted RBP24.07■■□□□ 1.44
PTPRA-206ENST00000430705 DLC1Q96QB1 1528 aa24.07■■□□□ 1.44
PTPRA-206ENST00000430705 NUTM2FA1L443 756 aa24.06■■□□□ 1.44
PTPRA-206ENST00000430705 ESCO1Q5FWF5 840 aa24.06■■□□□ 1.44
PTPRA-206ENST00000430705 CDK12Q9NYV4 1490 aaPredicted RBP24.06■■□□□ 1.44
PTPRA-206ENST00000430705 C8orf37Q96NL8 207 aa24.05■■□□□ 1.44
PTPRA-206ENST00000430705 ADGRB2O60241 1585 aa24.04■■□□□ 1.44
PTPRA-206ENST00000430705 USP32Q8NFA0 1604 aa24.04■■□□□ 1.44
PTPRA-206ENST00000430705 SIRT1Q96EB6 747 aa24.04■■□□□ 1.44
PTPRA-206ENST00000430705 NPHP3Q7Z494 1330 aa24.04■■□□□ 1.44
PTPRA-206ENST00000430705 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
PTPRA-206ENST00000430705 XPCQ01831 940 aaPredicted RBP24.02■■□□□ 1.44
PTPRA-206ENST00000430705 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
PTPRA-206ENST00000430705 RGS12O14924 1447 aa24.01■■□□□ 1.43
PTPRA-206ENST00000430705 FOXO3O43524 673 aa24.01■■□□□ 1.43
PTPRA-206ENST00000430705 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
PTPRA-206ENST00000430705 HRCP23327 699 aa24■■□□□ 1.43
PTPRA-206ENST00000430705 RXRBP28702 533 aa23.99■■□□□ 1.43
PTPRA-206ENST00000430705 PRAM1Q96QH2 718 aa23.98■■□□□ 1.43
PTPRA-206ENST00000430705 SAFB2Q14151 953 aaKnown RBP eCLIP23.95■■□□□ 1.42
PTPRA-206ENST00000430705 ARHGEF28Q8N1W1 1705 aaKnown RBP23.95■■□□□ 1.42
PTPRA-206ENST00000430705 ABCA3Q99758 1704 aa23.95■■□□□ 1.42
PTPRA-206ENST00000430705 NGLY1Q96IV0 654 aa23.94■■□□□ 1.42
PTPRA-206ENST00000430705 DCAF11Q8TEB1 546 aa23.93■■□□□ 1.42
PTPRA-206ENST00000430705 QTRT2Q9H974 415 aaKnown RBP23.93■■□□□ 1.42
PTPRA-206ENST00000430705 ATRNO75882 1429 aa23.93■■□□□ 1.42
PTPRA-206ENST00000430705 FNBP4Q8N3X1 1017 aaPredicted RBP23.92■■□□□ 1.42
PTPRA-206ENST00000430705 UPF1Q92900 1129 aaKnown RBP eCLIP23.92■■□□□ 1.42
PTPRA-206ENST00000430705 SPATA31A3Q5VYP0 1347 aa23.91■■□□□ 1.42
PTPRA-206ENST00000430705 RBM6P78332 1123 aaKnown RBP23.91■■□□□ 1.42
PTPRA-206ENST00000430705 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
PTPRA-206ENST00000430705 BCL9LQ86UU0 1499 aa23.91■■□□□ 1.42
PTPRA-206ENST00000430705 ANKARQ7Z5J8 1434 aa23.91■■□□□ 1.42
PTPRA-206ENST00000430705 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.9■■□□□ 1.42
PTPRA-206ENST00000430705 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
PTPRA-206ENST00000430705 TNS3Q68CZ2 1445 aa23.9■■□□□ 1.42
PTPRA-206ENST00000430705 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.41
PTPRA-206ENST00000430705 USP21Q9UK80 565 aa23.88■■□□□ 1.41
PTPRA-206ENST00000430705 TRAK1Q9UPV9 953 aa23.88■■□□□ 1.41
PTPRA-206ENST00000430705 TULP4Q9NRJ4 1543 aa23.88■■□□□ 1.41
PTPRA-206ENST00000430705 KRT28Q7Z3Y7 464 aa23.87■■□□□ 1.41
PTPRA-206ENST00000430705 PRR36Q9H6K5 1346 aa23.86■■□□□ 1.41
PTPRA-206ENST00000430705 POGKQ9P215 609 aa23.86■■□□□ 1.41
PTPRA-206ENST00000430705 SLIT2O94813 1529 aa23.85■■□□□ 1.41
PTPRA-206ENST00000430705 KIAA1210Q9ULL0 1709 aa23.85■■□□□ 1.41
PTPRA-206ENST00000430705 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
PTPRA-206ENST00000430705 EP400Q96L91 3159 aa23.85■■□□□ 1.41
PTPRA-206ENST00000430705 ALS2Q96Q42 1657 aa23.84■■□□□ 1.41
PTPRA-206ENST00000430705 MINK1Q8N4C8 1332 aaPredicted RBP23.84■■□□□ 1.41
PTPRA-206ENST00000430705 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.41
PTPRA-206ENST00000430705 SBNO1A3KN83 1393 aa23.83■■□□□ 1.41
PTPRA-206ENST00000430705 GLI3P10071 1580 aa23.82■■□□□ 1.4
PTPRA-206ENST00000430705 STAC3Q96MF2 364 aa23.82■■□□□ 1.4
PTPRA-206ENST00000430705 TRPC5Q9UL62 973 aaPredicted RBP23.82■■□□□ 1.4
PTPRA-206ENST00000430705 CRYBG1Q9Y4K1 1723 aa23.81■■□□□ 1.4
PTPRA-206ENST00000430705 ATP7BP35670 1465 aa23.81■■□□□ 1.4
PTPRA-206ENST00000430705 PMFBP1Q8TBY8 1022 aa23.8■■□□□ 1.4
PTPRA-206ENST00000430705 TOPAZ1Q8N9V7 1692 aa23.79■■□□□ 1.4
PTPRA-206ENST00000430705 CABLES1Q8TDN4 633 aa23.78■■□□□ 1.4
PTPRA-206ENST00000430705 ITSN1Q15811 1721 aa23.78■■□□□ 1.4
PTPRA-206ENST00000430705 NWD2Q9ULI1 1742 aa23.77■■□□□ 1.4
PTPRA-206ENST00000430705 WASLO00401 505 aaPredicted RBP23.77■■□□□ 1.4
PTPRA-206ENST00000430705 EIF3AQ14152 1382 aaKnown RBP23.76■■□□□ 1.39
PTPRA-206ENST00000430705 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
PTPRA-206ENST00000430705 RALGAPBQ86X10 1494 aa23.75■■□□□ 1.39
PTPRA-206ENST00000430705 PSME1Q06323 249 aa23.75■■□□□ 1.39
PTPRA-206ENST00000430705 ARHGEF10O15013 1369 aa23.75■■□□□ 1.39
PTPRA-206ENST00000430705 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
PTPRA-206ENST00000430705 ATAD2Q6PL18 1390 aa23.71■■□□□ 1.39
PTPRA-206ENST00000430705 GJD4Q96KN9 370 aaPredicted RBP23.71■■□□□ 1.39
PTPRA-206ENST00000430705 PLEKHG5O94827 1062 aa23.7■■□□□ 1.38
PTPRA-206ENST00000430705 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
PTPRA-206ENST00000430705 BRWD3Q6RI45 1802 aa23.7■■□□□ 1.38
PTPRA-206ENST00000430705 LMOD2Q6P5Q4 547 aa23.68■■□□□ 1.38
PTPRA-206ENST00000430705 PHRF1Q9P1Y6 1649 aaKnown RBP23.67■■□□□ 1.38
PTPRA-206ENST00000430705 GPRASP1Q5JY77 1395 aa23.66■■□□□ 1.38
PTPRA-206ENST00000430705 COL14A1Q05707 1796 aaKnown RBP23.66■■□□□ 1.38
PTPRA-206ENST00000430705 QRICH2Q9H0J4 1663 aa23.66■■□□□ 1.38
PTPRA-206ENST00000430705 TRPM1Q7Z4N2 1603 aa23.66■■□□□ 1.38
PTPRA-206ENST00000430705 NUDT16Q96DE0 195 aaKnown RBP23.65■■□□□ 1.38
PTPRA-206ENST00000430705 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
PTPRA-206ENST00000430705 FAM83GA6ND36 823 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms