RNA–Protein interactions for RNA: ENST00000428861.1

ATG4B-210, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-210ENST00000428861 ORAI2Q96SN7 254 aa15.59■□□□□ 0.09
ATG4B-210ENST00000428861 TRAK1Q9UPV9 953 aa15.59■□□□□ 0.09
ATG4B-210ENST00000428861 MED1Q15648 1581 aaPredicted RBP15.58■□□□□ 0.09
ATG4B-210ENST00000428861 COL16A1Q07092 1604 aaPredicted RBP15.58■□□□□ 0.09
ATG4B-210ENST00000428861 AHDC1Q5TGY3 1603 aaPredicted RBP15.58■□□□□ 0.09
ATG4B-210ENST00000428861 PHLPP1O60346 1717 aa15.58■□□□□ 0.08
ATG4B-210ENST00000428861 SAFB2Q14151 953 aaKnown RBP eCLIP15.58■□□□□ 0.08
ATG4B-210ENST00000428861 NBPF1Q3BBV0 1214 aa15.58■□□□□ 0.08
ATG4B-210ENST00000428861 DLC1Q96QB1 1528 aa15.58■□□□□ 0.08
ATG4B-210ENST00000428861 NUTM2FA1L443 756 aa15.57■□□□□ 0.08
ATG4B-210ENST00000428861 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
ATG4B-210ENST00000428861 ILDR2Q71H61 639 aa15.54■□□□□ 0.08
ATG4B-210ENST00000428861 PCGF6Q9BYE7 350 aa15.54■□□□□ 0.08
ATG4B-210ENST00000428861 NHSL1Q5SYE7 1610 aa15.54■□□□□ 0.08
ATG4B-210ENST00000428861 POGKQ9P215 609 aa15.53■□□□□ 0.08
ATG4B-210ENST00000428861 JCADQ9P266 1359 aa15.52■□□□□ 0.08
ATG4B-210ENST00000428861 HIRIP3Q9BW71 556 aaPredicted RBP15.52■□□□□ 0.08
ATG4B-210ENST00000428861 NBPF8Q3BBV2 869 aa15.51■□□□□ 0.07
ATG4B-210ENST00000428861 ESCO1Q5FWF5 840 aa15.51■□□□□ 0.07
ATG4B-210ENST00000428861 FMN2Q9NZ56 1722 aa15.51■□□□□ 0.07
ATG4B-210ENST00000428861 KIAA1210Q9ULL0 1709 aa15.51■□□□□ 0.07
ATG4B-210ENST00000428861 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
ATG4B-210ENST00000428861 SOS2Q07890 1332 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-210ENST00000428861 ARHGEF28Q8N1W1 1705 aaKnown RBP15.49■□□□□ 0.07
ATG4B-210ENST00000428861 RGS17Q9UGC6 210 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-210ENST00000428861 LRP6O75581 1613 aa15.49■□□□□ 0.07
ATG4B-210ENST00000428861 FOXO3O43524 673 aa15.47■□□□□ 0.07
ATG4B-210ENST00000428861 ADGRB2O60241 1585 aa15.47■□□□□ 0.07
ATG4B-210ENST00000428861 XPCQ01831 940 aaPredicted RBP15.47■□□□□ 0.07
ATG4B-210ENST00000428861 USP32Q8NFA0 1604 aa15.46■□□□□ 0.07
ATG4B-210ENST00000428861 PRR36Q9H6K5 1346 aa15.46■□□□□ 0.07
ATG4B-210ENST00000428861 LRRC59Q96AG4 307 aaKnown RBP15.46■□□□□ 0.07
ATG4B-210ENST00000428861 PNPLA6Q8IY17 1366 aa15.46■□□□□ 0.07
ATG4B-210ENST00000428861 PXDNQ92626 1479 aa15.46■□□□□ 0.06
ATG4B-210ENST00000428861 SHPRHQ149N8 1683 aa15.45■□□□□ 0.06
ATG4B-210ENST00000428861 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-210ENST00000428861 WASLO00401 505 aaPredicted RBP15.45■□□□□ 0.06
ATG4B-210ENST00000428861 TRPM1Q7Z4N2 1603 aa15.45■□□□□ 0.06
ATG4B-210ENST00000428861 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-210ENST00000428861 TONSLQ96HA7 1378 aa15.44■□□□□ 0.06
ATG4B-210ENST00000428861 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
ATG4B-210ENST00000428861 NPHP3Q7Z494 1330 aa15.43■□□□□ 0.06
ATG4B-210ENST00000428861 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
ATG4B-210ENST00000428861 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-210ENST00000428861 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-210ENST00000428861 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-210ENST00000428861 PMFBP1Q8TBY8 1022 aa15.42■□□□□ 0.06
ATG4B-210ENST00000428861 ANKARQ7Z5J8 1434 aa15.42■□□□□ 0.06
ATG4B-210ENST00000428861 ROCK2O75116 1388 aaKnown RBP15.41■□□□□ 0.06
ATG4B-210ENST00000428861 CDK19Q9BWU1 502 aa15.41■□□□□ 0.06
ATG4B-210ENST00000428861 TULP4Q9NRJ4 1543 aa15.41■□□□□ 0.06
ATG4B-210ENST00000428861 GPRASP1Q5JY77 1395 aa15.4■□□□□ 0.06
ATG4B-210ENST00000428861 CENPJQ9HC77 1338 aaPredicted RBP15.4■□□□□ 0.06
ATG4B-210ENST00000428861 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
ATG4B-210ENST00000428861 POTEAQ6S8J7 498 aa15.39■□□□□ 0.05
ATG4B-210ENST00000428861 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
ATG4B-210ENST00000428861 ATP7BP35670 1465 aa15.39■□□□□ 0.05
ATG4B-210ENST00000428861 NUDT16Q96DE0 195 aaKnown RBP15.38■□□□□ 0.05
ATG4B-210ENST00000428861 SPATA31A3Q5VYP0 1347 aa15.37■□□□□ 0.05
ATG4B-210ENST00000428861 RALGAPBQ86X10 1494 aa15.36■□□□□ 0.05
ATG4B-210ENST00000428861 MEX3CQ5U5Q3 659 aaKnown RBP15.36■□□□□ 0.05
ATG4B-210ENST00000428861 EIF3AQ14152 1382 aaKnown RBP15.36■□□□□ 0.05
ATG4B-210ENST00000428861 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
ATG4B-210ENST00000428861 CABP2Q9NPB3 220 aa15.35■□□□□ 0.05
ATG4B-210ENST00000428861 COL22A1Q8NFW1 1626 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-210ENST00000428861 QRICH2Q9H0J4 1663 aa15.35■□□□□ 0.05
ATG4B-210ENST00000428861 PSME1Q06323 249 aa15.34■□□□□ 0.05
ATG4B-210ENST00000428861 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
ATG4B-210ENST00000428861 C8orf37Q96NL8 207 aa15.33■□□□□ 0.04
ATG4B-210ENST00000428861 SBNO1A3KN83 1393 aa15.33■□□□□ 0.04
ATG4B-210ENST00000428861 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
ATG4B-210ENST00000428861 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
ATG4B-210ENST00000428861 CCDC61Q9Y6R9 512 aa15.32■□□□□ 0.04
ATG4B-210ENST00000428861 NGDNQ8NEJ9 315 aaKnown RBP15.31■□□□□ 0.04
ATG4B-210ENST00000428861 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
ATG4B-210ENST00000428861 AFF2P51816 1311 aa15.31■□□□□ 0.04
ATG4B-210ENST00000428861 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
ATG4B-210ENST00000428861 TOPAZ1Q8N9V7 1692 aa15.31■□□□□ 0.04
ATG4B-210ENST00000428861 TRPM3Q9HCF6 1732 aaPredicted RBP15.31■□□□□ 0.04
ATG4B-210ENST00000428861 PLEKHG3A1L390 1219 aa15.3■□□□□ 0.04
ATG4B-210ENST00000428861 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
ATG4B-210ENST00000428861 ACEP12821 1306 aa15.3■□□□□ 0.04
ATG4B-210ENST00000428861 POLR3AO14802 1390 aaPredicted RBP15.29■□□□□ 0.04
ATG4B-210ENST00000428861 PPIP5K1Q6PFW1 1433 aa15.28■□□□□ 0.04
ATG4B-210ENST00000428861 SOCS7O14512 581 aa15.28■□□□□ 0.04
ATG4B-210ENST00000428861 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
ATG4B-210ENST00000428861 CCER1Q8TC90 406 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-210ENST00000428861 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
ATG4B-210ENST00000428861 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
ATG4B-210ENST00000428861 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.04
ATG4B-210ENST00000428861 NGLY1Q96IV0 654 aa15.27■□□□□ 0.04
ATG4B-210ENST00000428861 CABP1Q9NZU7 370 aa15.27■□□□□ 0.04
ATG4B-210ENST00000428861 ALS2Q96Q42 1657 aa15.26■□□□□ 0.03
ATG4B-210ENST00000428861 FNBP4Q8N3X1 1017 aaPredicted RBP15.26■□□□□ 0.03
ATG4B-210ENST00000428861 ARHGEF10O15013 1369 aa15.25■□□□□ 0.03
ATG4B-210ENST00000428861 SBNO2Q9Y2G9 1366 aa15.25■□□□□ 0.03
ATG4B-210ENST00000428861 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
ATG4B-210ENST00000428861 TIMELESSQ9UNS1 1208 aa15.25■□□□□ 0.03
ATG4B-210ENST00000428861 ST20-MTHFSA0A0A6YYL1 179 aa15.24■□□□□ 0.03
ATG4B-210ENST00000428861 TESK2Q96S53 571 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms