RNA–Protein interactions for RNA: ENST00000427570.1

NXF3-202, Transcript of nuclear RNA export factor 3, humanhuman

TSL 1 (best)

Gene NXF3, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-202ENST00000427570 NGLY1Q96IV0 654 aa12.18□□□□□ -0.46
NXF3-202ENST00000427570 ADGRF5Q8IZF2 1346 aa12.17□□□□□ -0.46
NXF3-202ENST00000427570 SPATA31E1Q6ZUB1 1445 aa12.17□□□□□ -0.46
NXF3-202ENST00000427570 ESCO1Q5FWF5 840 aa12.16□□□□□ -0.46
NXF3-202ENST00000427570 NPHP3Q7Z494 1330 aa12.15□□□□□ -0.46
NXF3-202ENST00000427570 TECPR2O15040 1411 aa12.15□□□□□ -0.46
NXF3-202ENST00000427570 ADAMTS2O95450 1211 aa12.15□□□□□ -0.46
NXF3-202ENST00000427570 STK26Q9P289 416 aa12.15□□□□□ -0.46
NXF3-202ENST00000427570 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
NXF3-202ENST00000427570 ABCC11Q96J66 1382 aa12.15□□□□□ -0.46
NXF3-202ENST00000427570 IFT172Q9UG01 1749 aa12.14□□□□□ -0.47
NXF3-202ENST00000427570 CDC42BPGQ6DT37 1551 aa12.14□□□□□ -0.47
NXF3-202ENST00000427570 WAPLQ7Z5K2 1190 aa12.14□□□□□ -0.47
NXF3-202ENST00000427570 SIRT1Q96EB6 747 aa12.14□□□□□ -0.47
NXF3-202ENST00000427570 TMEM132EQ6IEE7 984 aa12.13□□□□□ -0.47
NXF3-202ENST00000427570 FNBP4Q8N3X1 1017 aaPredicted RBP12.13□□□□□ -0.47
NXF3-202ENST00000427570 USP21Q9UK80 565 aa12.13□□□□□ -0.47
NXF3-202ENST00000427570 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
NXF3-202ENST00000427570 COL22A1Q8NFW1 1626 aaPredicted RBP12.12□□□□□ -0.47
NXF3-202ENST00000427570 FOXO3O43524 673 aa12.12□□□□□ -0.47
NXF3-202ENST00000427570 C14orf93Q9H972 538 aaKnown RBP12.12□□□□□ -0.47
NXF3-202ENST00000427570 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
NXF3-202ENST00000427570 KNDC1Q76NI1 1749 aa12.11□□□□□ -0.47
NXF3-202ENST00000427570 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
NXF3-202ENST00000427570 PXDNQ92626 1479 aa12.09□□□□□ -0.47
NXF3-202ENST00000427570 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
NXF3-202ENST00000427570 NUTM2FA1L443 756 aa12.09□□□□□ -0.47
NXF3-202ENST00000427570 RGS12O14924 1447 aa12.09□□□□□ -0.47
NXF3-202ENST00000427570 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.48
NXF3-202ENST00000427570 MYOM2P54296 1465 aa12.08□□□□□ -0.48
NXF3-202ENST00000427570 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
NXF3-202ENST00000427570 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
NXF3-202ENST00000427570 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
NXF3-202ENST00000427570 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
NXF3-202ENST00000427570 MARF1Q9Y4F3 1742 aaKnown RBP12.07□□□□□ -0.48
NXF3-202ENST00000427570 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
NXF3-202ENST00000427570 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
NXF3-202ENST00000427570 ATRNO75882 1429 aa12.06□□□□□ -0.48
NXF3-202ENST00000427570 PSME1Q06323 249 aa12.06□□□□□ -0.48
NXF3-202ENST00000427570 SPATA31A3Q5VYP0 1347 aa12.06□□□□□ -0.48
NXF3-202ENST00000427570 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
NXF3-202ENST00000427570 PHF8Q9UPP1 1060 aa12.05□□□□□ -0.48
NXF3-202ENST00000427570 RAB3GAP2Q9H2M9 1393 aa12.05□□□□□ -0.48
NXF3-202ENST00000427570 BCL9LQ86UU0 1499 aa12.04□□□□□ -0.48
NXF3-202ENST00000427570 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
NXF3-202ENST00000427570 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
NXF3-202ENST00000427570 POGKQ9P215 609 aa12.04□□□□□ -0.48
NXF3-202ENST00000427570 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
NXF3-202ENST00000427570 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
NXF3-202ENST00000427570 RGPD8O14715 1765 aaPredicted RBP12.02□□□□□ -0.48
NXF3-202ENST00000427570 HRCP23327 699 aa12.02□□□□□ -0.49
NXF3-202ENST00000427570 CCDC125Q86Z20 511 aa12.02□□□□□ -0.49
NXF3-202ENST00000427570 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
NXF3-202ENST00000427570 HAP1P54257 671 aaPredicted RBP12.01□□□□□ -0.49
NXF3-202ENST00000427570 SAFB2Q14151 953 aaKnown RBP eCLIP12.01□□□□□ -0.49
NXF3-202ENST00000427570 SBNO1A3KN83 1393 aa12.01□□□□□ -0.49
NXF3-202ENST00000427570 TNKS1BP1Q9C0C2 1729 aaKnown RBP12□□□□□ -0.49
NXF3-202ENST00000427570 TNS3Q68CZ2 1445 aa12□□□□□ -0.49
NXF3-202ENST00000427570 SLIT2O94813 1529 aa12□□□□□ -0.49
NXF3-202ENST00000427570 DCAF11Q8TEB1 546 aa11.99□□□□□ -0.49
NXF3-202ENST00000427570 KDM2AQ9Y2K7 1162 aa11.99□□□□□ -0.49
NXF3-202ENST00000427570 ARHGEF10O15013 1369 aa11.99□□□□□ -0.49
NXF3-202ENST00000427570 ANKARQ7Z5J8 1434 aa11.99□□□□□ -0.49
NXF3-202ENST00000427570 USP32Q8NFA0 1604 aa11.98□□□□□ -0.49
NXF3-202ENST00000427570 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
NXF3-202ENST00000427570 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
NXF3-202ENST00000427570 TRAK1Q9UPV9 953 aa11.98□□□□□ -0.49
NXF3-202ENST00000427570 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
NXF3-202ENST00000427570 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
NXF3-202ENST00000427570 ADGRB2O60241 1585 aa11.96□□□□□ -0.49
NXF3-202ENST00000427570 RALGAPBQ86X10 1494 aa11.96□□□□□ -0.49
NXF3-202ENST00000427570 WASLO00401 505 aaPredicted RBP11.96□□□□□ -0.49
NXF3-202ENST00000427570 VPS72Q15906 364 aa11.96□□□□□ -0.49
NXF3-202ENST00000427570 CABLES1Q8TDN4 633 aa11.96□□□□□ -0.49
NXF3-202ENST00000427570 GPRASP1Q5JY77 1395 aa11.95□□□□□ -0.5
NXF3-202ENST00000427570 NWD2Q9ULI1 1742 aa11.95□□□□□ -0.5
NXF3-202ENST00000427570 ONECUT3O60422 494 aaPredicted RBP11.95□□□□□ -0.5
NXF3-202ENST00000427570 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
NXF3-202ENST00000427570 ZRANB1Q9UGI0 708 aa11.95□□□□□ -0.5
NXF3-202ENST00000427570 GLI3P10071 1580 aa11.95□□□□□ -0.5
NXF3-202ENST00000427570 MINK1Q8N4C8 1332 aaPredicted RBP11.94□□□□□ -0.5
NXF3-202ENST00000427570 PLEKHG5O94827 1062 aa11.94□□□□□ -0.5
NXF3-202ENST00000427570 FAM83GA6ND36 823 aa11.93□□□□□ -0.5
NXF3-202ENST00000427570 SEPT12Q8IYM1 358 aa11.93□□□□□ -0.5
NXF3-202ENST00000427570 NGDNQ8NEJ9 315 aaKnown RBP11.93□□□□□ -0.5
NXF3-202ENST00000427570 CCDC9Q9Y3X0 531 aaKnown RBP11.93□□□□□ -0.5
NXF3-202ENST00000427570 PLCH1Q4KWH8 1693 aa11.93□□□□□ -0.5
NXF3-202ENST00000427570 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
NXF3-202ENST00000427570 TULP4Q9NRJ4 1543 aa11.92□□□□□ -0.5
NXF3-202ENST00000427570 BLMP54132 1417 aaPredicted RBP11.92□□□□□ -0.5
NXF3-202ENST00000427570 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
NXF3-202ENST00000427570 SF3B2Q13435 895 aaKnown RBP11.91□□□□□ -0.5
NXF3-202ENST00000427570 TRPM3Q9HCF6 1732 aaPredicted RBP11.91□□□□□ -0.5
NXF3-202ENST00000427570 BRWD3Q6RI45 1802 aa11.9□□□□□ -0.5
NXF3-202ENST00000427570 KRT27Q7Z3Y8 459 aa11.9□□□□□ -0.5
NXF3-202ENST00000427570 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
NXF3-202ENST00000427570 BTG4Q9NY30 223 aa11.9□□□□□ -0.5
NXF3-202ENST00000427570 ALS2Q96Q42 1657 aa11.9□□□□□ -0.5
NXF3-202ENST00000427570 PAK3O75914 559 aaPredicted RBP11.89□□□□□ -0.51
NXF3-202ENST00000427570 COL14A1Q05707 1796 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms