RNA–Protein interactions for RNA: ENST00000427234.5

ITSN2-207, Transcript of intersectin 2, humanhuman

TSL 3

Gene ITSN2, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-207ENST00000427234 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
ITSN2-207ENST00000427234 C1orf167Q5SNV9 1468 aa16.12■□□□□ 0.17
ITSN2-207ENST00000427234 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
ITSN2-207ENST00000427234 WAPLQ7Z5K2 1190 aa16.12■□□□□ 0.17
ITSN2-207ENST00000427234 SIRT1Q96EB6 747 aa16.12■□□□□ 0.17
ITSN2-207ENST00000427234 ASXL1Q8IXJ9 1541 aa16.12■□□□□ 0.17
ITSN2-207ENST00000427234 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
ITSN2-207ENST00000427234 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
ITSN2-207ENST00000427234 RGS17Q9UGC6 210 aaPredicted RBP16.11■□□□□ 0.17
ITSN2-207ENST00000427234 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
ITSN2-207ENST00000427234 DCAF11Q8TEB1 546 aa16.1■□□□□ 0.17
ITSN2-207ENST00000427234 SPATA31A6Q5VVP1 1343 aa16.1■□□□□ 0.17
ITSN2-207ENST00000427234 DHX57Q6P158 1386 aaKnown RBP16.1■□□□□ 0.17
ITSN2-207ENST00000427234 LRRC59Q96AG4 307 aaKnown RBP16.09■□□□□ 0.17
ITSN2-207ENST00000427234 ORAI2Q96SN7 254 aa16.08■□□□□ 0.16
ITSN2-207ENST00000427234 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
ITSN2-207ENST00000427234 DDX17Q92841 729 aaKnown RBP16.07■□□□□ 0.16
ITSN2-207ENST00000427234 PLEKHH1Q9ULM0 1364 aa16.06■□□□□ 0.16
ITSN2-207ENST00000427234 CDC42BPGQ6DT37 1551 aa16.04■□□□□ 0.16
ITSN2-207ENST00000427234 ESCO1Q5FWF5 840 aa16.04■□□□□ 0.16
ITSN2-207ENST00000427234 KNDC1Q76NI1 1749 aa16.04■□□□□ 0.16
ITSN2-207ENST00000427234 LAMC1P11047 1609 aa16.04■□□□□ 0.16
ITSN2-207ENST00000427234 NHSL1Q5SYE7 1610 aa16.04■□□□□ 0.16
ITSN2-207ENST00000427234 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
ITSN2-207ENST00000427234 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
ITSN2-207ENST00000427234 SHPRHQ149N8 1683 aa16.02■□□□□ 0.16
ITSN2-207ENST00000427234 MEX3CQ5U5Q3 659 aaKnown RBP16.02■□□□□ 0.16
ITSN2-207ENST00000427234 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
ITSN2-207ENST00000427234 POGKQ9P215 609 aa16.01■□□□□ 0.15
ITSN2-207ENST00000427234 LRP6O75581 1613 aa16.01■□□□□ 0.15
ITSN2-207ENST00000427234 ADGRB1O14514 1584 aa16■□□□□ 0.15
ITSN2-207ENST00000427234 NPHP3Q7Z494 1330 aa16■□□□□ 0.15
ITSN2-207ENST00000427234 DLC1Q96QB1 1528 aa16■□□□□ 0.15
ITSN2-207ENST00000427234 NUTM2BA6NNL0 878 aaPredicted RBP16■□□□□ 0.15
ITSN2-207ENST00000427234 NUTM2EB1AL46 878 aaPredicted RBP16■□□□□ 0.15
ITSN2-207ENST00000427234 NUTM2AQ8IVF1 878 aaPredicted RBP16■□□□□ 0.15
ITSN2-207ENST00000427234 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
ITSN2-207ENST00000427234 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
ITSN2-207ENST00000427234 SAFB2Q14151 953 aaKnown RBP eCLIP15.99■□□□□ 0.15
ITSN2-207ENST00000427234 TRAK1Q9UPV9 953 aa15.99■□□□□ 0.15
ITSN2-207ENST00000427234 FOXO3O43524 673 aa15.98■□□□□ 0.15
ITSN2-207ENST00000427234 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
ITSN2-207ENST00000427234 PXDNQ92626 1479 aa15.93■□□□□ 0.14
ITSN2-207ENST00000427234 XPCQ01831 940 aaPredicted RBP15.93■□□□□ 0.14
ITSN2-207ENST00000427234 PHF8Q9UPP1 1060 aa15.93■□□□□ 0.14
ITSN2-207ENST00000427234 FMN2Q9NZ56 1722 aa15.93■□□□□ 0.14
ITSN2-207ENST00000427234 AFF2P51816 1311 aa15.92■□□□□ 0.14
ITSN2-207ENST00000427234 MINK1Q8N4C8 1332 aaPredicted RBP15.92■□□□□ 0.14
ITSN2-207ENST00000427234 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
ITSN2-207ENST00000427234 KRT28Q7Z3Y7 464 aa15.91■□□□□ 0.14
ITSN2-207ENST00000427234 L3MBTL2Q969R5 705 aa15.91■□□□□ 0.14
ITSN2-207ENST00000427234 C8orf37Q96NL8 207 aa15.91■□□□□ 0.14
ITSN2-207ENST00000427234 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
ITSN2-207ENST00000427234 HIRIP3Q9BW71 556 aaPredicted RBP15.91■□□□□ 0.14
ITSN2-207ENST00000427234 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
ITSN2-207ENST00000427234 WASLO00401 505 aaPredicted RBP15.9■□□□□ 0.14
ITSN2-207ENST00000427234 ADAMTS2O95450 1211 aa15.9■□□□□ 0.14
ITSN2-207ENST00000427234 PSME1Q06323 249 aa15.9■□□□□ 0.14
ITSN2-207ENST00000427234 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
ITSN2-207ENST00000427234 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
ITSN2-207ENST00000427234 ADGRB2O60241 1585 aa15.89■□□□□ 0.13
ITSN2-207ENST00000427234 NBPF1Q3BBV0 1214 aa15.89■□□□□ 0.13
ITSN2-207ENST00000427234 NGLY1Q96IV0 654 aa15.89■□□□□ 0.13
ITSN2-207ENST00000427234 SPATA31A3Q5VYP0 1347 aa15.89■□□□□ 0.13
ITSN2-207ENST00000427234 RXRBP28702 533 aa15.88■□□□□ 0.13
ITSN2-207ENST00000427234 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
ITSN2-207ENST00000427234 KIF1AQ12756 1690 aa15.88■□□□□ 0.13
ITSN2-207ENST00000427234 KIAA1210Q9ULL0 1709 aa15.87■□□□□ 0.13
ITSN2-207ENST00000427234 COL22A1Q8NFW1 1626 aaPredicted RBP15.86■□□□□ 0.13
ITSN2-207ENST00000427234 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
ITSN2-207ENST00000427234 QTRT2Q9H974 415 aaKnown RBP15.86■□□□□ 0.13
ITSN2-207ENST00000427234 PRR36Q9H6K5 1346 aa15.86■□□□□ 0.13
ITSN2-207ENST00000427234 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
ITSN2-207ENST00000427234 FNBP4Q8N3X1 1017 aaPredicted RBP15.85■□□□□ 0.13
ITSN2-207ENST00000427234 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
ITSN2-207ENST00000427234 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.12
ITSN2-207ENST00000427234 CDK19Q9BWU1 502 aa15.83■□□□□ 0.12
ITSN2-207ENST00000427234 TNS3Q68CZ2 1445 aa15.83■□□□□ 0.12
ITSN2-207ENST00000427234 USP32Q8NFA0 1604 aa15.83■□□□□ 0.12
ITSN2-207ENST00000427234 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
ITSN2-207ENST00000427234 RBM6P78332 1123 aaKnown RBP15.82■□□□□ 0.12
ITSN2-207ENST00000427234 NUDT16Q96DE0 195 aaKnown RBP15.82■□□□□ 0.12
ITSN2-207ENST00000427234 USP21Q9UK80 565 aa15.82■□□□□ 0.12
ITSN2-207ENST00000427234 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
ITSN2-207ENST00000427234 GPRASP1Q5JY77 1395 aa15.81■□□□□ 0.12
ITSN2-207ENST00000427234 CDK12Q9NYV4 1490 aaPredicted RBP15.8■□□□□ 0.12
ITSN2-207ENST00000427234 CENPJQ9HC77 1338 aaPredicted RBP15.8■□□□□ 0.12
ITSN2-207ENST00000427234 NGDNQ8NEJ9 315 aaKnown RBP15.8■□□□□ 0.12
ITSN2-207ENST00000427234 TRPC5Q9UL62 973 aaPredicted RBP15.8■□□□□ 0.12
ITSN2-207ENST00000427234 LMOD2Q6P5Q4 547 aa15.79■□□□□ 0.12
ITSN2-207ENST00000427234 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
ITSN2-207ENST00000427234 ATP7BP35670 1465 aa15.78■□□□□ 0.12
ITSN2-207ENST00000427234 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
ITSN2-207ENST00000427234 HAP1P54257 671 aaPredicted RBP15.77■□□□□ 0.12
ITSN2-207ENST00000427234 CABLES1Q8TDN4 633 aa15.77■□□□□ 0.12
ITSN2-207ENST00000427234 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
ITSN2-207ENST00000427234 BCL9LQ86UU0 1499 aa15.76■□□□□ 0.11
ITSN2-207ENST00000427234 ATRNO75882 1429 aa15.76■□□□□ 0.11
ITSN2-207ENST00000427234 NBPF8Q3BBV2 869 aa15.75■□□□□ 0.11
ITSN2-207ENST00000427234 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms