RNA–Protein interactions for RNA: ENST00000426921.5

UBXN4-204, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-204ENST00000426921 ORAI2Q96SN7 254 aa30.86■■■□□ 2.53
UBXN4-204ENST00000426921 SOS2Q07890 1332 aaPredicted RBP30.86■■■□□ 2.53
UBXN4-204ENST00000426921 YTHDC2Q9H6S0 1430 aaKnown RBP30.83■■■□□ 2.53
UBXN4-204ENST00000426921 NUTM2BA6NNL0 878 aaPredicted RBP30.82■■■□□ 2.52
UBXN4-204ENST00000426921 NUTM2EB1AL46 878 aaPredicted RBP30.82■■■□□ 2.52
UBXN4-204ENST00000426921 NUTM2AQ8IVF1 878 aaPredicted RBP30.82■■■□□ 2.52
UBXN4-204ENST00000426921 TMEM132EQ6IEE7 984 aa30.81■■■□□ 2.52
UBXN4-204ENST00000426921 STK26Q9P289 416 aa30.81■■■□□ 2.52
UBXN4-204ENST00000426921 C14orf93Q9H972 538 aaKnown RBP30.8■■■□□ 2.52
UBXN4-204ENST00000426921 WAPLQ7Z5K2 1190 aa30.79■■■□□ 2.52
UBXN4-204ENST00000426921 PLEKHH1Q9ULM0 1364 aa30.79■■■□□ 2.52
UBXN4-204ENST00000426921 SIRT1Q96EB6 747 aa30.77■■■□□ 2.52
UBXN4-204ENST00000426921 HRCP23327 699 aa30.76■■■□□ 2.51
UBXN4-204ENST00000426921 COL22A1Q8NFW1 1626 aaPredicted RBP30.75■■■□□ 2.51
UBXN4-204ENST00000426921 PXDNQ92626 1479 aa30.75■■■□□ 2.51
UBXN4-204ENST00000426921 AFF2P51816 1311 aa30.74■■■□□ 2.51
UBXN4-204ENST00000426921 FMN2Q9NZ56 1722 aa30.74■■■□□ 2.51
UBXN4-204ENST00000426921 NPHP3Q7Z494 1330 aa30.73■■■□□ 2.51
UBXN4-204ENST00000426921 CDK12Q9NYV4 1490 aaPredicted RBP30.72■■■□□ 2.51
UBXN4-204ENST00000426921 ESCO1Q5FWF5 840 aa30.72■■■□□ 2.51
UBXN4-204ENST00000426921 DHX57Q6P158 1386 aaKnown RBP30.71■■■□□ 2.51
UBXN4-204ENST00000426921 CFAP70Q5T0N1 1121 aa30.71■■■□□ 2.51
UBXN4-204ENST00000426921 DLC1Q96QB1 1528 aa30.69■■■□□ 2.5
UBXN4-204ENST00000426921 ADGRB1O14514 1584 aa30.68■■■□□ 2.5
UBXN4-204ENST00000426921 C8orf37Q96NL8 207 aa30.68■■■□□ 2.5
UBXN4-204ENST00000426921 RXRBP28702 533 aa30.67■■■□□ 2.5
UBXN4-204ENST00000426921 KIF1AQ12756 1690 aa30.67■■■□□ 2.5
UBXN4-204ENST00000426921 FOXO3O43524 673 aa30.63■■■□□ 2.49
UBXN4-204ENST00000426921 NUTM2FA1L443 756 aa30.61■■■□□ 2.49
UBXN4-204ENST00000426921 ADAMTS2O95450 1211 aa30.61■■■□□ 2.49
UBXN4-204ENST00000426921 ADGRB2O60241 1585 aa30.6■■■□□ 2.49
UBXN4-204ENST00000426921 STAC3Q96MF2 364 aa30.6■■■□□ 2.49
UBXN4-204ENST00000426921 PRAM1Q96QH2 718 aa30.59■■■□□ 2.49
UBXN4-204ENST00000426921 NGLY1Q96IV0 654 aa30.58■■■□□ 2.49
UBXN4-204ENST00000426921 QTRT2Q9H974 415 aaKnown RBP30.57■■■□□ 2.48
UBXN4-204ENST00000426921 RBM6P78332 1123 aaKnown RBP30.56■■■□□ 2.48
UBXN4-204ENST00000426921 XPCQ01831 940 aaPredicted RBP30.56■■■□□ 2.48
UBXN4-204ENST00000426921 RGS12O14924 1447 aa30.56■■■□□ 2.48
UBXN4-204ENST00000426921 FNBP4Q8N3X1 1017 aaPredicted RBP30.55■■■□□ 2.48
UBXN4-204ENST00000426921 DCAF11Q8TEB1 546 aa30.54■■■□□ 2.48
UBXN4-204ENST00000426921 MARF1Q9Y4F3 1742 aaKnown RBP30.53■■■□□ 2.48
UBXN4-204ENST00000426921 ANKARQ7Z5J8 1434 aa30.53■■■□□ 2.48
UBXN4-204ENST00000426921 RGPD8O14715 1765 aaPredicted RBP30.53■■■□□ 2.48
UBXN4-204ENST00000426921 SPATA31A3Q5VYP0 1347 aa30.52■■■□□ 2.48
UBXN4-204ENST00000426921 USP32Q8NFA0 1604 aa30.51■■■□□ 2.48
UBXN4-204ENST00000426921 UPF1Q92900 1129 aaKnown RBP eCLIP30.51■■■□□ 2.47
UBXN4-204ENST00000426921 SAFB2Q14151 953 aaKnown RBP eCLIP30.5■■■□□ 2.47
UBXN4-204ENST00000426921 USP21Q9UK80 565 aa30.5■■■□□ 2.47
UBXN4-204ENST00000426921 PHF8Q9UPP1 1060 aa30.5■■■□□ 2.47
UBXN4-204ENST00000426921 KDM2AQ9Y2K7 1162 aa30.5■■■□□ 2.47
UBXN4-204ENST00000426921 POGKQ9P215 609 aa30.49■■■□□ 2.47
UBXN4-204ENST00000426921 ATRNO75882 1429 aa30.48■■■□□ 2.47
UBXN4-204ENST00000426921 TNS3Q68CZ2 1445 aa30.47■■■□□ 2.47
UBXN4-204ENST00000426921 KRT28Q7Z3Y7 464 aa30.47■■■□□ 2.47
UBXN4-204ENST00000426921 TRPC5Q9UL62 973 aaPredicted RBP30.47■■■□□ 2.47
UBXN4-204ENST00000426921 TRAK1Q9UPV9 953 aa30.46■■■□□ 2.47
UBXN4-204ENST00000426921 BCL9LQ86UU0 1499 aa30.45■■■□□ 2.47
UBXN4-204ENST00000426921 SBNO1A3KN83 1393 aa30.44■■■□□ 2.46
UBXN4-204ENST00000426921 EIF3AQ14152 1382 aaKnown RBP30.43■■■□□ 2.46
UBXN4-204ENST00000426921 TULP4Q9NRJ4 1543 aa30.42■■■□□ 2.46
UBXN4-204ENST00000426921 ARHGEF28Q8N1W1 1705 aaKnown RBP30.42■■■□□ 2.46
UBXN4-204ENST00000426921 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.42■■■□□ 2.46
UBXN4-204ENST00000426921 PSME1Q06323 249 aa30.41■■■□□ 2.46
UBXN4-204ENST00000426921 SLIT2O94813 1529 aa30.39■■■□□ 2.46
UBXN4-204ENST00000426921 KIAA1210Q9ULL0 1709 aa30.39■■■□□ 2.45
UBXN4-204ENST00000426921 HIRIP3Q9BW71 556 aaPredicted RBP30.37■■■□□ 2.45
UBXN4-204ENST00000426921 MINK1Q8N4C8 1332 aaPredicted RBP30.37■■■□□ 2.45
UBXN4-204ENST00000426921 ARHGEF10O15013 1369 aa30.37■■■□□ 2.45
UBXN4-204ENST00000426921 ABCA3Q99758 1704 aa30.36■■■□□ 2.45
UBXN4-204ENST00000426921 PRR36Q9H6K5 1346 aa30.36■■■□□ 2.45
UBXN4-204ENST00000426921 TRPM3Q9HCF6 1732 aaPredicted RBP30.36■■■□□ 2.45
UBXN4-204ENST00000426921 WASLO00401 505 aaPredicted RBP30.35■■■□□ 2.45
UBXN4-204ENST00000426921 PMFBP1Q8TBY8 1022 aa30.33■■■□□ 2.45
UBXN4-204ENST00000426921 ALS2Q96Q42 1657 aa30.3■■■□□ 2.44
UBXN4-204ENST00000426921 ATP7BP35670 1465 aa30.3■■■□□ 2.44
UBXN4-204ENST00000426921 ATAD2Q6PL18 1390 aa30.29■■■□□ 2.44
UBXN4-204ENST00000426921 UNC5CLQ8IV45 518 aa30.29■■■□□ 2.44
UBXN4-204ENST00000426921 GJD4Q96KN9 370 aaPredicted RBP30.29■■■□□ 2.44
UBXN4-204ENST00000426921 ITSN1Q15811 1721 aa30.27■■■□□ 2.44
UBXN4-204ENST00000426921 GLI3P10071 1580 aa30.27■■■□□ 2.44
UBXN4-204ENST00000426921 NWD2Q9ULI1 1742 aa30.27■■■□□ 2.44
UBXN4-204ENST00000426921 GPRASP1Q5JY77 1395 aa30.27■■■□□ 2.44
UBXN4-204ENST00000426921 CABLES1Q8TDN4 633 aa30.26■■■□□ 2.43
UBXN4-204ENST00000426921 PLCH1Q4KWH8 1693 aa30.26■■■□□ 2.43
UBXN4-204ENST00000426921 RALGAPBQ86X10 1494 aa30.25■■■□□ 2.43
UBXN4-204ENST00000426921 HAP1P54257 671 aaPredicted RBP30.24■■■□□ 2.43
UBXN4-204ENST00000426921 LMOD2Q6P5Q4 547 aa30.22■■■□□ 2.43
UBXN4-204ENST00000426921 TOPAZ1Q8N9V7 1692 aa30.21■■■□□ 2.43
UBXN4-204ENST00000426921 EP400Q96L91 3159 aa30.21■■■□□ 2.43
UBXN4-204ENST00000426921 CRYBG1Q9Y4K1 1723 aa30.2■■■□□ 2.43
UBXN4-204ENST00000426921 NUDT16Q96DE0 195 aaKnown RBP30.19■■■□□ 2.42
UBXN4-204ENST00000426921 NBPF1Q3BBV0 1214 aa30.18■■■□□ 2.42
UBXN4-204ENST00000426921 NGDNQ8NEJ9 315 aaKnown RBP30.18■■■□□ 2.42
UBXN4-204ENST00000426921 VPS72Q15906 364 aa30.17■■■□□ 2.42
UBXN4-204ENST00000426921 CDK19Q9BWU1 502 aa30.16■■■□□ 2.42
UBXN4-204ENST00000426921 NRAPQ86VF7 1730 aa30.15■■■□□ 2.42
UBXN4-204ENST00000426921 POLR3AO14802 1390 aaPredicted RBP30.15■■■□□ 2.42
UBXN4-204ENST00000426921 FAM83GA6ND36 823 aa30.14■■■□□ 2.42
UBXN4-204ENST00000426921 COL14A1Q05707 1796 aaKnown RBP30.13■■■□□ 2.41
UBXN4-204ENST00000426921 PLEKHG5O94827 1062 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms