RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 LAMC1P11047 1609 aa32.22■■■□□ 2.75
SEMA3F-205ENST00000426511 PLEKHH1Q9ULM0 1364 aa32.22■■■□□ 2.75
SEMA3F-205ENST00000426511 DHX57Q6P158 1386 aaKnown RBP32.21■■■□□ 2.75
SEMA3F-205ENST00000426511 MEX3CQ5U5Q3 659 aaKnown RBP32.21■■■□□ 2.75
SEMA3F-205ENST00000426511 SPATA31A6Q5VVP1 1343 aa32.2■■■□□ 2.74
SEMA3F-205ENST00000426511 SHPRHQ149N8 1683 aa32.19■■■□□ 2.74
SEMA3F-205ENST00000426511 NUTM2FA1L443 756 aa32.19■■■□□ 2.74
SEMA3F-205ENST00000426511 CDC42BPGQ6DT37 1551 aa32.19■■■□□ 2.74
SEMA3F-205ENST00000426511 NUTM2BA6NNL0 878 aaPredicted RBP32.18■■■□□ 2.74
SEMA3F-205ENST00000426511 NUTM2EB1AL46 878 aaPredicted RBP32.18■■■□□ 2.74
SEMA3F-205ENST00000426511 NUTM2AQ8IVF1 878 aaPredicted RBP32.18■■■□□ 2.74
SEMA3F-205ENST00000426511 LRP6O75581 1613 aa32.16■■■□□ 2.74
SEMA3F-205ENST00000426511 LRRC59Q96AG4 307 aaKnown RBP32.16■■■□□ 2.74
SEMA3F-205ENST00000426511 ESCO1Q5FWF5 840 aa32.15■■■□□ 2.74
SEMA3F-205ENST00000426511 SAFB2Q14151 953 aaKnown RBP eCLIP32.14■■■□□ 2.74
SEMA3F-205ENST00000426511 PRAM1Q96QH2 718 aa32.11■■■□□ 2.73
SEMA3F-205ENST00000426511 POTEAQ6S8J7 498 aa32.1■■■□□ 2.73
SEMA3F-205ENST00000426511 POGKQ9P215 609 aa32.09■■■□□ 2.73
SEMA3F-205ENST00000426511 SIRT1Q96EB6 747 aa32.08■■■□□ 2.73
SEMA3F-205ENST00000426511 TRAK1Q9UPV9 953 aa32.08■■■□□ 2.73
SEMA3F-205ENST00000426511 PNPLA6Q8IY17 1366 aa32.06■■■□□ 2.72
SEMA3F-205ENST00000426511 STAC3Q96MF2 364 aa32.05■■■□□ 2.72
SEMA3F-205ENST00000426511 ADGRB1O14514 1584 aa32.05■■■□□ 2.72
SEMA3F-205ENST00000426511 FMN2Q9NZ56 1722 aa32.03■■■□□ 2.72
SEMA3F-205ENST00000426511 SOS2Q07890 1332 aaPredicted RBP32.03■■■□□ 2.72
SEMA3F-205ENST00000426511 XPCQ01831 940 aaPredicted RBP32.03■■■□□ 2.72
SEMA3F-205ENST00000426511 NPHP3Q7Z494 1330 aa32.02■■■□□ 2.72
SEMA3F-205ENST00000426511 FOXO3O43524 673 aa32.02■■■□□ 2.72
SEMA3F-205ENST00000426511 DLC1Q96QB1 1528 aa32.01■■■□□ 2.72
SEMA3F-205ENST00000426511 HIRIP3Q9BW71 556 aaPredicted RBP31.97■■■□□ 2.71
SEMA3F-205ENST00000426511 ZNF772Q68DY9 489 aaPredicted RBP31.96■■■□□ 2.71
SEMA3F-205ENST00000426511 ADAMTS2O95450 1211 aa31.95■■■□□ 2.71
SEMA3F-205ENST00000426511 C8orf37Q96NL8 207 aa31.95■■■□□ 2.71
SEMA3F-205ENST00000426511 MINK1Q8N4C8 1332 aaPredicted RBP31.95■■■□□ 2.7
SEMA3F-205ENST00000426511 PXDNQ92626 1479 aa31.92■■■□□ 2.7
SEMA3F-205ENST00000426511 AFF2P51816 1311 aa31.92■■■□□ 2.7
SEMA3F-205ENST00000426511 RGPD8O14715 1765 aaPredicted RBP31.91■■■□□ 2.7
SEMA3F-205ENST00000426511 KIF1AQ12756 1690 aa31.91■■■□□ 2.7
SEMA3F-205ENST00000426511 NEUROD1Q13562 356 aa31.89■■■□□ 2.7
SEMA3F-205ENST00000426511 SIN3AQ96ST3 1273 aa31.89■■■□□ 2.7
SEMA3F-205ENST00000426511 PHF8Q9UPP1 1060 aa31.89■■■□□ 2.7
SEMA3F-205ENST00000426511 ADGRB2O60241 1585 aa31.86■■■□□ 2.69
SEMA3F-205ENST00000426511 KRT28Q7Z3Y7 464 aa31.86■■■□□ 2.69
SEMA3F-205ENST00000426511 NGLY1Q96IV0 654 aa31.86■■■□□ 2.69
SEMA3F-205ENST00000426511 ARHGEF28Q8N1W1 1705 aaKnown RBP31.84■■■□□ 2.69
SEMA3F-205ENST00000426511 PMFBP1Q8TBY8 1022 aa31.84■■■□□ 2.69
SEMA3F-205ENST00000426511 COL22A1Q8NFW1 1626 aaPredicted RBP31.82■■■□□ 2.69
SEMA3F-205ENST00000426511 NBPF1Q3BBV0 1214 aa31.82■■■□□ 2.68
SEMA3F-205ENST00000426511 L3MBTL2Q969R5 705 aa31.82■■■□□ 2.68
SEMA3F-205ENST00000426511 ANKARQ7Z5J8 1434 aa31.82■■■□□ 2.68
SEMA3F-205ENST00000426511 KIAA1210Q9ULL0 1709 aa31.81■■■□□ 2.68
SEMA3F-205ENST00000426511 USP32Q8NFA0 1604 aa31.81■■■□□ 2.68
SEMA3F-205ENST00000426511 WASLO00401 505 aaPredicted RBP31.8■■■□□ 2.68
SEMA3F-205ENST00000426511 PLEKHG5O94827 1062 aa31.8■■■□□ 2.68
SEMA3F-205ENST00000426511 RXRBP28702 533 aa31.79■■■□□ 2.68
SEMA3F-205ENST00000426511 PSME1Q06323 249 aa31.79■■■□□ 2.68
SEMA3F-205ENST00000426511 EIF3AQ14152 1382 aaKnown RBP31.79■■■□□ 2.68
SEMA3F-205ENST00000426511 SPATA31A3Q5VYP0 1347 aa31.78■■■□□ 2.68
SEMA3F-205ENST00000426511 TRIM26Q12899 539 aaPredicted RBP31.78■■■□□ 2.68
SEMA3F-205ENST00000426511 LMOD2Q6P5Q4 547 aa31.78■■■□□ 2.68
SEMA3F-205ENST00000426511 TULP4Q9NRJ4 1543 aa31.76■■■□□ 2.68
SEMA3F-205ENST00000426511 PRR36Q9H6K5 1346 aa31.75■■■□□ 2.67
SEMA3F-205ENST00000426511 QTRT2Q9H974 415 aaKnown RBP31.75■■■□□ 2.67
SEMA3F-205ENST00000426511 TNS3Q68CZ2 1445 aa31.73■■■□□ 2.67
SEMA3F-205ENST00000426511 HAP1P54257 671 aaPredicted RBP31.72■■■□□ 2.67
SEMA3F-205ENST00000426511 USP21Q9UK80 565 aa31.72■■■□□ 2.67
SEMA3F-205ENST00000426511 NGDNQ8NEJ9 315 aaKnown RBP31.68■■■□□ 2.66
SEMA3F-205ENST00000426511 CDK19Q9BWU1 502 aa31.68■■■□□ 2.66
SEMA3F-205ENST00000426511 SBNO1A3KN83 1393 aa31.68■■■□□ 2.66
SEMA3F-205ENST00000426511 GPRASP1Q5JY77 1395 aa31.68■■■□□ 2.66
SEMA3F-205ENST00000426511 CABLES1Q8TDN4 633 aa31.67■■■□□ 2.66
SEMA3F-205ENST00000426511 NUDT16Q96DE0 195 aaKnown RBP31.66■■■□□ 2.66
SEMA3F-205ENST00000426511 RBM6P78332 1123 aaKnown RBP31.65■■■□□ 2.66
SEMA3F-205ENST00000426511 MARF1Q9Y4F3 1742 aaKnown RBP31.65■■■□□ 2.66
SEMA3F-205ENST00000426511 FNBP4Q8N3X1 1017 aaPredicted RBP31.64■■■□□ 2.66
SEMA3F-205ENST00000426511 CENPJQ9HC77 1338 aaPredicted RBP31.64■■■□□ 2.66
SEMA3F-205ENST00000426511 ARHGEF10O15013 1369 aa31.64■■■□□ 2.66
SEMA3F-205ENST00000426511 ATP7BP35670 1465 aa31.64■■■□□ 2.66
SEMA3F-205ENST00000426511 ITSN1Q15811 1721 aa31.62■■■□□ 2.65
SEMA3F-205ENST00000426511 TRPC5Q9UL62 973 aaPredicted RBP31.62■■■□□ 2.65
SEMA3F-205ENST00000426511 TRPM1Q7Z4N2 1603 aa31.61■■■□□ 2.65
SEMA3F-205ENST00000426511 PAK3O75914 559 aaPredicted RBP31.61■■■□□ 2.65
SEMA3F-205ENST00000426511 ROCK2O75116 1388 aaKnown RBP31.6■■■□□ 2.65
SEMA3F-205ENST00000426511 CDK12Q9NYV4 1490 aaPredicted RBP31.59■■■□□ 2.65
SEMA3F-205ENST00000426511 SRPK2P78362 688 aaKnown RBP31.59■■■□□ 2.65
SEMA3F-205ENST00000426511 TRPM3Q9HCF6 1732 aaPredicted RBP31.58■■■□□ 2.65
SEMA3F-205ENST00000426511 RGS12O14924 1447 aa31.58■■■□□ 2.65
SEMA3F-205ENST00000426511 QRICH2Q9H0J4 1663 aa31.57■■■□□ 2.64
SEMA3F-205ENST00000426511 TONSLQ96HA7 1378 aa31.56■■■□□ 2.64
SEMA3F-205ENST00000426511 ATRNO75882 1429 aa31.55■■■□□ 2.64
SEMA3F-205ENST00000426511 BCL9LQ86UU0 1499 aa31.54■■■□□ 2.64
SEMA3F-205ENST00000426511 CCDC61Q9Y6R9 512 aa31.54■■■□□ 2.64
SEMA3F-205ENST00000426511 ABCA3Q99758 1704 aa31.53■■■□□ 2.64
SEMA3F-205ENST00000426511 NBPF8Q3BBV2 869 aa31.53■■■□□ 2.64
SEMA3F-205ENST00000426511 CABP2Q9NPB3 220 aa31.53■■■□□ 2.64
SEMA3F-205ENST00000426511 TOPAZ1Q8N9V7 1692 aa31.51■■■□□ 2.63
SEMA3F-205ENST00000426511 ALS2Q96Q42 1657 aa31.51■■■□□ 2.63
SEMA3F-205ENST00000426511 ACEP12821 1306 aa31.5■■■□□ 2.63
SEMA3F-205ENST00000426511 UNC5CLQ8IV45 518 aa31.49■■■□□ 2.63
SEMA3F-205ENST00000426511 SLIT2O94813 1529 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms