RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
SMARCAL1-205ENST00000425815 ADGRB1O14514 1584 aa26.72■■□□□ 1.87
SMARCAL1-205ENST00000425815 SOCS7O14512 581 aa26.72■■□□□ 1.87
SMARCAL1-205ENST00000425815 PRAM1Q96QH2 718 aa26.71■■□□□ 1.87
SMARCAL1-205ENST00000425815 KNDC1Q76NI1 1749 aa26.7■■□□□ 1.87
SMARCAL1-205ENST00000425815 SPATA31A6Q5VVP1 1343 aa26.7■■□□□ 1.87
SMARCAL1-205ENST00000425815 LRRC59Q96AG4 307 aaKnown RBP26.7■■□□□ 1.86
SMARCAL1-205ENST00000425815 NUTM2FA1L443 756 aa26.69■■□□□ 1.86
SMARCAL1-205ENST00000425815 ESCO1Q5FWF5 840 aa26.69■■□□□ 1.86
SMARCAL1-205ENST00000425815 CDC42BPGQ6DT37 1551 aa26.69■■□□□ 1.86
SMARCAL1-205ENST00000425815 TRAK1Q9UPV9 953 aa26.69■■□□□ 1.86
SMARCAL1-205ENST00000425815 LAMC1P11047 1609 aa26.68■■□□□ 1.86
SMARCAL1-205ENST00000425815 NHSL1Q5SYE7 1610 aa26.68■■□□□ 1.86
SMARCAL1-205ENST00000425815 SOS2Q07890 1332 aaPredicted RBP26.67■■□□□ 1.86
SMARCAL1-205ENST00000425815 SAFB2Q14151 953 aaKnown RBP eCLIP26.67■■□□□ 1.86
SMARCAL1-205ENST00000425815 SIN3AQ96ST3 1273 aa26.67■■□□□ 1.86
SMARCAL1-205ENST00000425815 LRP6O75581 1613 aa26.67■■□□□ 1.86
SMARCAL1-205ENST00000425815 POTEAQ6S8J7 498 aa26.65■■□□□ 1.86
SMARCAL1-205ENST00000425815 DLC1Q96QB1 1528 aa26.65■■□□□ 1.86
SMARCAL1-205ENST00000425815 POGKQ9P215 609 aa26.64■■□□□ 1.86
SMARCAL1-205ENST00000425815 FOXO3O43524 673 aa26.62■■□□□ 1.85
SMARCAL1-205ENST00000425815 TRIM26Q12899 539 aaPredicted RBP26.62■■□□□ 1.85
SMARCAL1-205ENST00000425815 PNPLA6Q8IY17 1366 aa26.61■■□□□ 1.85
SMARCAL1-205ENST00000425815 SHPRHQ149N8 1683 aa26.61■■□□□ 1.85
SMARCAL1-205ENST00000425815 NUTM2BA6NNL0 878 aaPredicted RBP26.61■■□□□ 1.85
SMARCAL1-205ENST00000425815 NUTM2EB1AL46 878 aaPredicted RBP26.61■■□□□ 1.85
SMARCAL1-205ENST00000425815 NUTM2AQ8IVF1 878 aaPredicted RBP26.61■■□□□ 1.85
SMARCAL1-205ENST00000425815 L3MBTL2Q969R5 705 aa26.6■■□□□ 1.85
SMARCAL1-205ENST00000425815 NBPF1Q3BBV0 1214 aa26.59■■□□□ 1.85
SMARCAL1-205ENST00000425815 NPHP3Q7Z494 1330 aa26.57■■□□□ 1.84
SMARCAL1-205ENST00000425815 XPCQ01831 940 aaPredicted RBP26.56■■□□□ 1.84
SMARCAL1-205ENST00000425815 NEUROD1Q13562 356 aa26.56■■□□□ 1.84
SMARCAL1-205ENST00000425815 HIRIP3Q9BW71 556 aaPredicted RBP26.56■■□□□ 1.84
SMARCAL1-205ENST00000425815 MEX3CQ5U5Q3 659 aaKnown RBP26.55■■□□□ 1.84
SMARCAL1-205ENST00000425815 MINK1Q8N4C8 1332 aaPredicted RBP26.54■■□□□ 1.84
SMARCAL1-205ENST00000425815 PXDNQ92626 1479 aa26.54■■□□□ 1.84
SMARCAL1-205ENST00000425815 FMN2Q9NZ56 1722 aa26.53■■□□□ 1.84
SMARCAL1-205ENST00000425815 PHF8Q9UPP1 1060 aa26.52■■□□□ 1.84
SMARCAL1-205ENST00000425815 WASLO00401 505 aaPredicted RBP26.49■■□□□ 1.83
SMARCAL1-205ENST00000425815 PRR36Q9H6K5 1346 aa26.48■■□□□ 1.83
SMARCAL1-205ENST00000425815 KRT28Q7Z3Y7 464 aa26.48■■□□□ 1.83
SMARCAL1-205ENST00000425815 ADGRB2O60241 1585 aa26.47■■□□□ 1.83
SMARCAL1-205ENST00000425815 ZNF772Q68DY9 489 aaPredicted RBP26.46■■□□□ 1.83
SMARCAL1-205ENST00000425815 ANKARQ7Z5J8 1434 aa26.46■■□□□ 1.83
SMARCAL1-205ENST00000425815 ADAMTS2O95450 1211 aa26.45■■□□□ 1.82
SMARCAL1-205ENST00000425815 PMFBP1Q8TBY8 1022 aa26.45■■□□□ 1.82
SMARCAL1-205ENST00000425815 SPATA31A3Q5VYP0 1347 aa26.44■■□□□ 1.82
SMARCAL1-205ENST00000425815 C8orf37Q96NL8 207 aa26.44■■□□□ 1.82
SMARCAL1-205ENST00000425815 AFF2P51816 1311 aa26.43■■□□□ 1.82
SMARCAL1-205ENST00000425815 KIAA1210Q9ULL0 1709 aa26.43■■□□□ 1.82
SMARCAL1-205ENST00000425815 USP32Q8NFA0 1604 aa26.43■■□□□ 1.82
SMARCAL1-205ENST00000425815 ARHGEF28Q8N1W1 1705 aaKnown RBP26.4■■□□□ 1.82
SMARCAL1-205ENST00000425815 RGPD8O14715 1765 aaPredicted RBP26.39■■□□□ 1.82
SMARCAL1-205ENST00000425815 KIF1AQ12756 1690 aa26.39■■□□□ 1.82
SMARCAL1-205ENST00000425815 PSME1Q06323 249 aa26.39■■□□□ 1.82
SMARCAL1-205ENST00000425815 NBPF8Q3BBV2 869 aa26.39■■□□□ 1.82
SMARCAL1-205ENST00000425815 CDK19Q9BWU1 502 aa26.39■■□□□ 1.82
SMARCAL1-205ENST00000425815 COL22A1Q8NFW1 1626 aaPredicted RBP26.38■■□□□ 1.81
SMARCAL1-205ENST00000425815 TULP4Q9NRJ4 1543 aa26.38■■□□□ 1.81
SMARCAL1-205ENST00000425815 NUDT16Q96DE0 195 aaKnown RBP26.37■■□□□ 1.81
SMARCAL1-205ENST00000425815 NGLY1Q96IV0 654 aa26.37■■□□□ 1.81
SMARCAL1-205ENST00000425815 SBNO1A3KN83 1393 aa26.36■■□□□ 1.81
SMARCAL1-205ENST00000425815 EIF3AQ14152 1382 aaKnown RBP26.36■■□□□ 1.81
SMARCAL1-205ENST00000425815 FNBP4Q8N3X1 1017 aaPredicted RBP26.34■■□□□ 1.81
SMARCAL1-205ENST00000425815 QTRT2Q9H974 415 aaKnown RBP26.34■■□□□ 1.81
SMARCAL1-205ENST00000425815 RXRBP28702 533 aa26.33■■□□□ 1.81
SMARCAL1-205ENST00000425815 CENPJQ9HC77 1338 aaPredicted RBP26.33■■□□□ 1.81
SMARCAL1-205ENST00000425815 TNS3Q68CZ2 1445 aa26.32■■□□□ 1.8
SMARCAL1-205ENST00000425815 ATP7BP35670 1465 aa26.31■■□□□ 1.8
SMARCAL1-205ENST00000425815 CABLES1Q8TDN4 633 aa26.3■■□□□ 1.8
SMARCAL1-205ENST00000425815 NGDNQ8NEJ9 315 aaKnown RBP26.29■■□□□ 1.8
SMARCAL1-205ENST00000425815 USP21Q9UK80 565 aa26.29■■□□□ 1.8
SMARCAL1-205ENST00000425815 CCDC61Q9Y6R9 512 aa26.28■■□□□ 1.8
SMARCAL1-205ENST00000425815 ROCK2O75116 1388 aaKnown RBP26.28■■□□□ 1.8
SMARCAL1-205ENST00000425815 LMOD2Q6P5Q4 547 aa26.27■■□□□ 1.8
SMARCAL1-205ENST00000425815 GPRASP1Q5JY77 1395 aa26.27■■□□□ 1.8
SMARCAL1-205ENST00000425815 TRPM1Q7Z4N2 1603 aa26.27■■□□□ 1.8
SMARCAL1-205ENST00000425815 PLEKHG3A1L390 1219 aa26.26■■□□□ 1.79
SMARCAL1-205ENST00000425815 CABP2Q9NPB3 220 aa26.25■■□□□ 1.79
SMARCAL1-205ENST00000425815 BCL9LQ86UU0 1499 aa26.24■■□□□ 1.79
SMARCAL1-205ENST00000425815 ARHGEF10O15013 1369 aa26.24■■□□□ 1.79
SMARCAL1-205ENST00000425815 PLEKHG5O94827 1062 aa26.24■■□□□ 1.79
SMARCAL1-205ENST00000425815 RBM6P78332 1123 aaKnown RBP26.24■■□□□ 1.79
SMARCAL1-205ENST00000425815 TONSLQ96HA7 1378 aa26.23■■□□□ 1.79
SMARCAL1-205ENST00000425815 ACEP12821 1306 aa26.22■■□□□ 1.79
SMARCAL1-205ENST00000425815 SRPK2P78362 688 aaKnown RBP26.22■■□□□ 1.79
SMARCAL1-205ENST00000425815 TRPC5Q9UL62 973 aaPredicted RBP26.22■■□□□ 1.79
SMARCAL1-205ENST00000425815 POLR3AO14802 1390 aaPredicted RBP26.21■■□□□ 1.79
SMARCAL1-205ENST00000425815 TRPM3Q9HCF6 1732 aaPredicted RBP26.2■■□□□ 1.79
SMARCAL1-205ENST00000425815 ATRNO75882 1429 aa26.2■■□□□ 1.78
SMARCAL1-205ENST00000425815 CDK12Q9NYV4 1490 aaPredicted RBP26.19■■□□□ 1.78
SMARCAL1-205ENST00000425815 PAK3O75914 559 aaPredicted RBP26.19■■□□□ 1.78
SMARCAL1-205ENST00000425815 SLIT2O94813 1529 aa26.18■■□□□ 1.78
SMARCAL1-205ENST00000425815 FAM83GA6ND36 823 aa26.17■■□□□ 1.78
SMARCAL1-205ENST00000425815 CARD11Q9BXL7 1154 aa26.17■■□□□ 1.78
SMARCAL1-205ENST00000425815 HAP1P54257 671 aaPredicted RBP26.16■■□□□ 1.78
SMARCAL1-205ENST00000425815 UNC5CLQ8IV45 518 aa26.16■■□□□ 1.78
SMARCAL1-205ENST00000425815 PCGF6Q9BYE7 350 aa26.16■■□□□ 1.78
SMARCAL1-205ENST00000425815 CABP1Q9NZU7 370 aa26.15■■□□□ 1.78
SMARCAL1-205ENST00000425815 EVC2Q86UK5 1308 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms