RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 PLEKHH1Q9ULM0 1364 aa26.81■■□□□ 1.88
MSH5-207ENST00000425703 DLC1Q96QB1 1528 aa26.8■■□□□ 1.88
MSH5-207ENST00000425703 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
MSH5-207ENST00000425703 PRAM1Q96QH2 718 aa26.75■■□□□ 1.87
MSH5-207ENST00000425703 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
MSH5-207ENST00000425703 SPATA31A6Q5VVP1 1343 aa26.74■■□□□ 1.87
MSH5-207ENST00000425703 ILDR2Q71H61 639 aa26.74■■□□□ 1.87
MSH5-207ENST00000425703 ORAI2Q96SN7 254 aa26.74■■□□□ 1.87
MSH5-207ENST00000425703 LRRC59Q96AG4 307 aaKnown RBP26.73■■□□□ 1.87
MSH5-207ENST00000425703 POGKQ9P215 609 aa26.72■■□□□ 1.87
MSH5-207ENST00000425703 TRAK1Q9UPV9 953 aa26.7■■□□□ 1.86
MSH5-207ENST00000425703 ESCO1Q5FWF5 840 aa26.69■■□□□ 1.86
MSH5-207ENST00000425703 SHPRHQ149N8 1683 aa26.69■■□□□ 1.86
MSH5-207ENST00000425703 SOS2Q07890 1332 aaPredicted RBP26.68■■□□□ 1.86
MSH5-207ENST00000425703 SIN3AQ96ST3 1273 aa26.68■■□□□ 1.86
MSH5-207ENST00000425703 DDX17Q92841 729 aaKnown RBP26.67■■□□□ 1.86
MSH5-207ENST00000425703 L3MBTL2Q969R5 705 aa26.67■■□□□ 1.86
MSH5-207ENST00000425703 KIAA1210Q9ULL0 1709 aa26.67■■□□□ 1.86
MSH5-207ENST00000425703 NPHP3Q7Z494 1330 aa26.65■■□□□ 1.86
MSH5-207ENST00000425703 FMN2Q9NZ56 1722 aa26.65■■□□□ 1.86
MSH5-207ENST00000425703 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
MSH5-207ENST00000425703 ADGRB2O60241 1585 aa26.64■■□□□ 1.86
MSH5-207ENST00000425703 NEUROD1Q13562 356 aa26.62■■□□□ 1.85
MSH5-207ENST00000425703 NUTM2FA1L443 756 aa26.61■■□□□ 1.85
MSH5-207ENST00000425703 RGS17Q9UGC6 210 aaPredicted RBP26.61■■□□□ 1.85
MSH5-207ENST00000425703 PNPLA6Q8IY17 1366 aa26.6■■□□□ 1.85
MSH5-207ENST00000425703 ANKARQ7Z5J8 1434 aa26.6■■□□□ 1.85
MSH5-207ENST00000425703 LRP6O75581 1613 aa26.6■■□□□ 1.85
MSH5-207ENST00000425703 EIF3AQ14152 1382 aaKnown RBP26.59■■□□□ 1.85
MSH5-207ENST00000425703 FOXO3O43524 673 aa26.58■■□□□ 1.85
MSH5-207ENST00000425703 NBPF1Q3BBV0 1214 aa26.58■■□□□ 1.85
MSH5-207ENST00000425703 PXDNQ92626 1479 aa26.57■■□□□ 1.84
MSH5-207ENST00000425703 MINK1Q8N4C8 1332 aaPredicted RBP26.56■■□□□ 1.84
MSH5-207ENST00000425703 KIF1AQ12756 1690 aa26.56■■□□□ 1.84
MSH5-207ENST00000425703 WASLO00401 505 aaPredicted RBP26.55■■□□□ 1.84
MSH5-207ENST00000425703 PHF8Q9UPP1 1060 aa26.55■■□□□ 1.84
MSH5-207ENST00000425703 ARHGEF28Q8N1W1 1705 aaKnown RBP26.55■■□□□ 1.84
MSH5-207ENST00000425703 SOCS7O14512 581 aa26.54■■□□□ 1.84
MSH5-207ENST00000425703 MEX3CQ5U5Q3 659 aaKnown RBP26.54■■□□□ 1.84
MSH5-207ENST00000425703 HIRIP3Q9BW71 556 aaPredicted RBP26.54■■□□□ 1.84
MSH5-207ENST00000425703 NUTM2BA6NNL0 878 aaPredicted RBP26.52■■□□□ 1.84
MSH5-207ENST00000425703 NUTM2EB1AL46 878 aaPredicted RBP26.52■■□□□ 1.84
MSH5-207ENST00000425703 NUTM2AQ8IVF1 878 aaPredicted RBP26.52■■□□□ 1.84
MSH5-207ENST00000425703 TULP4Q9NRJ4 1543 aa26.5■■□□□ 1.83
MSH5-207ENST00000425703 USP32Q8NFA0 1604 aa26.48■■□□□ 1.83
MSH5-207ENST00000425703 XPCQ01831 940 aaPredicted RBP26.48■■□□□ 1.83
MSH5-207ENST00000425703 PSME1Q06323 249 aa26.47■■□□□ 1.83
MSH5-207ENST00000425703 ZNF772Q68DY9 489 aaPredicted RBP26.47■■□□□ 1.83
MSH5-207ENST00000425703 POTEAQ6S8J7 498 aa26.47■■□□□ 1.83
MSH5-207ENST00000425703 KRT28Q7Z3Y7 464 aa26.47■■□□□ 1.83
MSH5-207ENST00000425703 COL22A1Q8NFW1 1626 aaPredicted RBP26.47■■□□□ 1.83
MSH5-207ENST00000425703 TONSLQ96HA7 1378 aa26.46■■□□□ 1.83
MSH5-207ENST00000425703 PRR36Q9H6K5 1346 aa26.46■■□□□ 1.83
MSH5-207ENST00000425703 SPATA31A3Q5VYP0 1347 aa26.45■■□□□ 1.83
MSH5-207ENST00000425703 CENPJQ9HC77 1338 aaPredicted RBP26.45■■□□□ 1.83
MSH5-207ENST00000425703 TRPM1Q7Z4N2 1603 aa26.45■■□□□ 1.82
MSH5-207ENST00000425703 SBNO1A3KN83 1393 aa26.44■■□□□ 1.82
MSH5-207ENST00000425703 ROCK2O75116 1388 aaKnown RBP26.44■■□□□ 1.82
MSH5-207ENST00000425703 RGPD8O14715 1765 aaPredicted RBP26.43■■□□□ 1.82
MSH5-207ENST00000425703 PMFBP1Q8TBY8 1022 aa26.42■■□□□ 1.82
MSH5-207ENST00000425703 CDK19Q9BWU1 502 aa26.42■■□□□ 1.82
MSH5-207ENST00000425703 GPRASP1Q5JY77 1395 aa26.42■■□□□ 1.82
MSH5-207ENST00000425703 NBPF8Q3BBV2 869 aa26.41■■□□□ 1.82
MSH5-207ENST00000425703 NUDT16Q96DE0 195 aaKnown RBP26.41■■□□□ 1.82
MSH5-207ENST00000425703 ATP7BP35670 1465 aa26.41■■□□□ 1.82
MSH5-207ENST00000425703 TNS3Q68CZ2 1445 aa26.4■■□□□ 1.82
MSH5-207ENST00000425703 AFF2P51816 1311 aa26.39■■□□□ 1.81
MSH5-207ENST00000425703 C8orf37Q96NL8 207 aa26.38■■□□□ 1.81
MSH5-207ENST00000425703 ADAMTS2O95450 1211 aa26.37■■□□□ 1.81
MSH5-207ENST00000425703 CCDC61Q9Y6R9 512 aa26.37■■□□□ 1.81
MSH5-207ENST00000425703 ARHGEF10O15013 1369 aa26.36■■□□□ 1.81
MSH5-207ENST00000425703 NGDNQ8NEJ9 315 aaKnown RBP26.35■■□□□ 1.81
MSH5-207ENST00000425703 NGLY1Q96IV0 654 aa26.35■■□□□ 1.81
MSH5-207ENST00000425703 CLSPNQ9HAW4 1339 aa26.35■■□□□ 1.81
MSH5-207ENST00000425703 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
MSH5-207ENST00000425703 RALGAPBQ86X10 1494 aa26.33■■□□□ 1.81
MSH5-207ENST00000425703 ITSN1Q15811 1721 aa26.33■■□□□ 1.81
MSH5-207ENST00000425703 PLEKHG3A1L390 1219 aa26.32■■□□□ 1.8
MSH5-207ENST00000425703 FNBP4Q8N3X1 1017 aaPredicted RBP26.32■■□□□ 1.8
MSH5-207ENST00000425703 SRPK2P78362 688 aaKnown RBP26.31■■□□□ 1.8
MSH5-207ENST00000425703 POLR3AO14802 1390 aaPredicted RBP26.31■■□□□ 1.8
MSH5-207ENST00000425703 CARD11Q9BXL7 1154 aa26.3■■□□□ 1.8
MSH5-207ENST00000425703 QRICH2Q9H0J4 1663 aa26.3■■□□□ 1.8
MSH5-207ENST00000425703 TOPAZ1Q8N9V7 1692 aa26.28■■□□□ 1.8
MSH5-207ENST00000425703 RXRBP28702 533 aa26.28■■□□□ 1.8
MSH5-207ENST00000425703 EVC2Q86UK5 1308 aa26.28■■□□□ 1.8
MSH5-207ENST00000425703 TRPM3Q9HCF6 1732 aaPredicted RBP26.28■■□□□ 1.8
MSH5-207ENST00000425703 LMOD2Q6P5Q4 547 aa26.27■■□□□ 1.8
MSH5-207ENST00000425703 TIMELESSQ9UNS1 1208 aa26.27■■□□□ 1.8
MSH5-207ENST00000425703 SBNO2Q9Y2G9 1366 aa26.26■■□□□ 1.79
MSH5-207ENST00000425703 ACEP12821 1306 aa26.26■■□□□ 1.79
MSH5-207ENST00000425703 QTRT2Q9H974 415 aaKnown RBP26.26■■□□□ 1.79
MSH5-207ENST00000425703 CABP2Q9NPB3 220 aa26.26■■□□□ 1.79
MSH5-207ENST00000425703 USP21Q9UK80 565 aa26.26■■□□□ 1.79
MSH5-207ENST00000425703 CDK12Q9NYV4 1490 aaPredicted RBP26.24■■□□□ 1.79
MSH5-207ENST00000425703 PPIP5K1Q6PFW1 1433 aa26.23■■□□□ 1.79
MSH5-207ENST00000425703 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
MSH5-207ENST00000425703 RBM6P78332 1123 aaKnown RBP26.23■■□□□ 1.79
MSH5-207ENST00000425703 ALS2Q96Q42 1657 aa26.22■■□□□ 1.79
MSH5-207ENST00000425703 CABLES1Q8TDN4 633 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms