RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 CDC42BPGQ6DT37 1551 aa26.37■■□□□ 1.81
HDAC7-208ENST00000425451 COL22A1Q8NFW1 1626 aaPredicted RBP26.36■■□□□ 1.81
HDAC7-208ENST00000425451 RGL3Q3MIN7 710 aa26.36■■□□□ 1.81
HDAC7-208ENST00000425451 ESCO1Q5FWF5 840 aa26.36■■□□□ 1.81
HDAC7-208ENST00000425451 CCDC144AA2RUR9 1427 aa26.36■■□□□ 1.81
HDAC7-208ENST00000425451 FNBP4Q8N3X1 1017 aaPredicted RBP26.35■■□□□ 1.81
HDAC7-208ENST00000425451 TECPR2O15040 1411 aa26.34■■□□□ 1.81
HDAC7-208ENST00000425451 WAPLQ7Z5K2 1190 aa26.34■■□□□ 1.81
HDAC7-208ENST00000425451 USP21Q9UK80 565 aa26.34■■□□□ 1.81
HDAC7-208ENST00000425451 MPHOSPH9Q99550 1183 aa26.33■■□□□ 1.81
HDAC7-208ENST00000425451 STK26Q9P289 416 aa26.33■■□□□ 1.81
HDAC7-208ENST00000425451 PXDNQ92626 1479 aa26.33■■□□□ 1.81
HDAC7-208ENST00000425451 NPHP3Q7Z494 1330 aa26.33■■□□□ 1.81
HDAC7-208ENST00000425451 MYOM2P54296 1465 aa26.32■■□□□ 1.8
HDAC7-208ENST00000425451 LRPPRCP42704 1394 aaKnown RBP26.32■■□□□ 1.8
HDAC7-208ENST00000425451 ANKRD30BQ9BXX2 1392 aa26.32■■□□□ 1.8
HDAC7-208ENST00000425451 IFT172Q9UG01 1749 aa26.31■■□□□ 1.8
HDAC7-208ENST00000425451 FOXO3O43524 673 aa26.31■■□□□ 1.8
HDAC7-208ENST00000425451 ABCC11Q96J66 1382 aa26.31■■□□□ 1.8
HDAC7-208ENST00000425451 TMEM132EQ6IEE7 984 aa26.3■■□□□ 1.8
HDAC7-208ENST00000425451 TRPC5Q9UL62 973 aaPredicted RBP26.3■■□□□ 1.8
HDAC7-208ENST00000425451 XPCQ01831 940 aaPredicted RBP26.29■■□□□ 1.8
HDAC7-208ENST00000425451 PLEKHH1Q9ULM0 1364 aa26.29■■□□□ 1.8
HDAC7-208ENST00000425451 PIK3C2GO75747 1445 aa26.28■■□□□ 1.8
HDAC7-208ENST00000425451 ATRNO75882 1429 aa26.28■■□□□ 1.8
HDAC7-208ENST00000425451 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
HDAC7-208ENST00000425451 BCL9LQ86UU0 1499 aa26.25■■□□□ 1.79
HDAC7-208ENST00000425451 KNDC1Q76NI1 1749 aa26.25■■□□□ 1.79
HDAC7-208ENST00000425451 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
HDAC7-208ENST00000425451 ATAD2Q6PL18 1390 aa26.22■■□□□ 1.79
HDAC7-208ENST00000425451 MARF1Q9Y4F3 1742 aaKnown RBP26.21■■□□□ 1.79
HDAC7-208ENST00000425451 FMN2Q9NZ56 1722 aa26.2■■□□□ 1.79
HDAC7-208ENST00000425451 SIRT1Q96EB6 747 aa26.2■■□□□ 1.78
HDAC7-208ENST00000425451 C14orf93Q9H972 538 aaKnown RBP26.19■■□□□ 1.78
HDAC7-208ENST00000425451 SPATA31A3Q5VYP0 1347 aa26.17■■□□□ 1.78
HDAC7-208ENST00000425451 NRXN1Q9ULB1 1477 aa26.16■■□□□ 1.78
HDAC7-208ENST00000425451 CFAP70Q5T0N1 1121 aa26.14■■□□□ 1.78
HDAC7-208ENST00000425451 GJD4Q96KN9 370 aaPredicted RBP26.14■■□□□ 1.78
HDAC7-208ENST00000425451 KIF1AQ12756 1690 aa26.14■■□□□ 1.78
HDAC7-208ENST00000425451 KRT28Q7Z3Y7 464 aa26.13■■□□□ 1.77
HDAC7-208ENST00000425451 SLIT2O94813 1529 aa26.12■■□□□ 1.77
HDAC7-208ENST00000425451 UNC5CLQ8IV45 518 aa26.1■■□□□ 1.77
HDAC7-208ENST00000425451 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.1■■□□□ 1.77
HDAC7-208ENST00000425451 RGPD8O14715 1765 aaPredicted RBP26.1■■□□□ 1.77
HDAC7-208ENST00000425451 EP400Q96L91 3159 aa26.09■■□□□ 1.77
HDAC7-208ENST00000425451 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
HDAC7-208ENST00000425451 PHF8Q9UPP1 1060 aa26.09■■□□□ 1.77
HDAC7-208ENST00000425451 ACIN1Q9UKV3 1341 aaKnown RBP26.09■■□□□ 1.77
HDAC7-208ENST00000425451 GLI3P10071 1580 aa26.07■■□□□ 1.76
HDAC7-208ENST00000425451 USP32Q8NFA0 1604 aa26.06■■□□□ 1.76
HDAC7-208ENST00000425451 RALGAPBQ86X10 1494 aa26.06■■□□□ 1.76
HDAC7-208ENST00000425451 PRAM1Q96QH2 718 aa26.06■■□□□ 1.76
HDAC7-208ENST00000425451 TNS3Q68CZ2 1445 aa26.05■■□□□ 1.76
HDAC7-208ENST00000425451 CCDC125Q86Z20 511 aa26.05■■□□□ 1.76
HDAC7-208ENST00000425451 SRCAPQ6ZRS2 3230 aa26.05■■□□□ 1.76
HDAC7-208ENST00000425451 SAFB2Q14151 953 aaKnown RBP eCLIP26.04■■□□□ 1.76
HDAC7-208ENST00000425451 CABLES1Q8TDN4 633 aa26.04■■□□□ 1.76
HDAC7-208ENST00000425451 PSME1Q06323 249 aa26.03■■□□□ 1.76
HDAC7-208ENST00000425451 SBNO1A3KN83 1393 aa26.02■■□□□ 1.76
HDAC7-208ENST00000425451 DLC1Q96QB1 1528 aa26.01■■□□□ 1.75
HDAC7-208ENST00000425451 ADGRB1O14514 1584 aa25.99■■□□□ 1.75
HDAC7-208ENST00000425451 RAB3GAP2Q9H2M9 1393 aa25.99■■□□□ 1.75
HDAC7-208ENST00000425451 ZRANB1Q9UGI0 708 aa25.99■■□□□ 1.75
HDAC7-208ENST00000425451 POGKQ9P215 609 aa25.98■■□□□ 1.75
HDAC7-208ENST00000425451 ANKARQ7Z5J8 1434 aa25.97■■□□□ 1.75
HDAC7-208ENST00000425451 HAP1P54257 671 aaPredicted RBP25.97■■□□□ 1.75
HDAC7-208ENST00000425451 VPS72Q15906 364 aa25.97■■□□□ 1.75
HDAC7-208ENST00000425451 PMFBP1Q8TBY8 1022 aa25.97■■□□□ 1.75
HDAC7-208ENST00000425451 ADGRB2O60241 1585 aa25.96■■□□□ 1.75
HDAC7-208ENST00000425451 PLEKHG5O94827 1062 aa25.96■■□□□ 1.75
HDAC7-208ENST00000425451 ABCA3Q99758 1704 aa25.96■■□□□ 1.75
HDAC7-208ENST00000425451 ARHGEF10O15013 1369 aa25.95■■□□□ 1.75
HDAC7-208ENST00000425451 BRWD3Q6RI45 1802 aa25.95■■□□□ 1.75
HDAC7-208ENST00000425451 ONECUT3O60422 494 aaPredicted RBP25.95■■□□□ 1.74
HDAC7-208ENST00000425451 LMOD2Q6P5Q4 547 aa25.95■■□□□ 1.74
HDAC7-208ENST00000425451 SEPT12Q8IYM1 358 aa25.95■■□□□ 1.74
HDAC7-208ENST00000425451 PLCH1Q4KWH8 1693 aa25.94■■□□□ 1.74
HDAC7-208ENST00000425451 NWD2Q9ULI1 1742 aa25.94■■□□□ 1.74
HDAC7-208ENST00000425451 FAM83GA6ND36 823 aa25.93■■□□□ 1.74
HDAC7-208ENST00000425451 TRAK1Q9UPV9 953 aa25.93■■□□□ 1.74
HDAC7-208ENST00000425451 BLMP54132 1417 aaPredicted RBP25.93■■□□□ 1.74
HDAC7-208ENST00000425451 HIRIP3Q9BW71 556 aaPredicted RBP25.92■■□□□ 1.74
HDAC7-208ENST00000425451 PRR36Q9H6K5 1346 aa25.91■■□□□ 1.74
HDAC7-208ENST00000425451 TRPM3Q9HCF6 1732 aaPredicted RBP25.9■■□□□ 1.74
HDAC7-208ENST00000425451 KDM2AQ9Y2K7 1162 aa25.89■■□□□ 1.74
HDAC7-208ENST00000425451 MINK1Q8N4C8 1332 aaPredicted RBP25.88■■□□□ 1.73
HDAC7-208ENST00000425451 DCAF11Q8TEB1 546 aa25.88■■□□□ 1.73
HDAC7-208ENST00000425451 DEFB132Q7Z7B7 95 aa25.87■■□□□ 1.73
HDAC7-208ENST00000425451 CCDC9Q9Y3X0 531 aaKnown RBP25.87■■□□□ 1.73
HDAC7-208ENST00000425451 ALS2Q96Q42 1657 aa25.86■■□□□ 1.73
HDAC7-208ENST00000425451 TULP4Q9NRJ4 1543 aa25.85■■□□□ 1.73
HDAC7-208ENST00000425451 WASLO00401 505 aaPredicted RBP25.85■■□□□ 1.73
HDAC7-208ENST00000425451 KRT27Q7Z3Y8 459 aa25.84■■□□□ 1.73
HDAC7-208ENST00000425451 EIF3AQ14152 1382 aaKnown RBP25.83■■□□□ 1.73
HDAC7-208ENST00000425451 GPRASP1Q5JY77 1395 aa25.83■■□□□ 1.73
HDAC7-208ENST00000425451 NRAPQ86VF7 1730 aa25.83■■□□□ 1.73
HDAC7-208ENST00000425451 BTG4Q9NY30 223 aa25.83■■□□□ 1.73
HDAC7-208ENST00000425451 STAC3Q96MF2 364 aa25.82■■□□□ 1.72
HDAC7-208ENST00000425451 SF3B2Q13435 895 aaKnown RBP25.79■■□□□ 1.72
HDAC7-208ENST00000425451 FAM98CQ17RN3 349 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms