RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 DHX57Q6P158 1386 aaKnown RBP24.24■■□□□ 1.47
SHANK2-207ENST00000425049 WAPLQ7Z5K2 1190 aa24.23■■□□□ 1.47
SHANK2-207ENST00000425049 CFAP70Q5T0N1 1121 aa24.22■■□□□ 1.47
SHANK2-207ENST00000425049 DDX17Q92841 729 aaKnown RBP24.22■■□□□ 1.47
SHANK2-207ENST00000425049 LRP6O75581 1613 aa24.21■■□□□ 1.47
SHANK2-207ENST00000425049 NUTM2BA6NNL0 878 aaPredicted RBP24.21■■□□□ 1.47
SHANK2-207ENST00000425049 NUTM2EB1AL46 878 aaPredicted RBP24.21■■□□□ 1.47
SHANK2-207ENST00000425049 NUTM2AQ8IVF1 878 aaPredicted RBP24.21■■□□□ 1.47
SHANK2-207ENST00000425049 ORAI2Q96SN7 254 aa24.21■■□□□ 1.47
SHANK2-207ENST00000425049 PLEKHH1Q9ULM0 1364 aa24.19■■□□□ 1.46
SHANK2-207ENST00000425049 DCAF11Q8TEB1 546 aa24.19■■□□□ 1.46
SHANK2-207ENST00000425049 ESCO1Q5FWF5 840 aa24.18■■□□□ 1.46
SHANK2-207ENST00000425049 KDM2AQ9Y2K7 1162 aa24.18■■□□□ 1.46
SHANK2-207ENST00000425049 POTEAQ6S8J7 498 aa24.17■■□□□ 1.46
SHANK2-207ENST00000425049 SIRT1Q96EB6 747 aa24.17■■□□□ 1.46
SHANK2-207ENST00000425049 STAC3Q96MF2 364 aa24.16■■□□□ 1.46
SHANK2-207ENST00000425049 PNPLA6Q8IY17 1366 aa24.16■■□□□ 1.46
SHANK2-207ENST00000425049 NPHP3Q7Z494 1330 aa24.14■■□□□ 1.46
SHANK2-207ENST00000425049 NUTM2FA1L443 756 aa24.14■■□□□ 1.45
SHANK2-207ENST00000425049 ZNF772Q68DY9 489 aaPredicted RBP24.14■■□□□ 1.45
SHANK2-207ENST00000425049 SOS2Q07890 1332 aaPredicted RBP24.13■■□□□ 1.45
SHANK2-207ENST00000425049 POGKQ9P215 609 aa24.13■■□□□ 1.45
SHANK2-207ENST00000425049 PRAM1Q96QH2 718 aa24.12■■□□□ 1.45
SHANK2-207ENST00000425049 SAFB2Q14151 953 aaKnown RBP eCLIP24.11■■□□□ 1.45
SHANK2-207ENST00000425049 DLC1Q96QB1 1528 aa24.1■■□□□ 1.45
SHANK2-207ENST00000425049 FMN2Q9NZ56 1722 aa24.09■■□□□ 1.45
SHANK2-207ENST00000425049 ADGRB1O14514 1584 aa24.08■■□□□ 1.45
SHANK2-207ENST00000425049 FOXO3O43524 673 aa24.07■■□□□ 1.44
SHANK2-207ENST00000425049 TRAK1Q9UPV9 953 aa24.07■■□□□ 1.44
SHANK2-207ENST00000425049 C8orf37Q96NL8 207 aa24.06■■□□□ 1.44
SHANK2-207ENST00000425049 AFF2P51816 1311 aa24.05■■□□□ 1.44
SHANK2-207ENST00000425049 KIF1AQ12756 1690 aa24.05■■□□□ 1.44
SHANK2-207ENST00000425049 ADAMTS2O95450 1211 aa24.04■■□□□ 1.44
SHANK2-207ENST00000425049 XPCQ01831 940 aaPredicted RBP24.04■■□□□ 1.44
SHANK2-207ENST00000425049 PXDNQ92626 1479 aa24.03■■□□□ 1.44
SHANK2-207ENST00000425049 EIF3AQ14152 1382 aaKnown RBP24.01■■□□□ 1.43
SHANK2-207ENST00000425049 NGLY1Q96IV0 654 aa24■■□□□ 1.43
SHANK2-207ENST00000425049 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
SHANK2-207ENST00000425049 ADGRB2O60241 1585 aa23.99■■□□□ 1.43
SHANK2-207ENST00000425049 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
SHANK2-207ENST00000425049 COL22A1Q8NFW1 1626 aaPredicted RBP23.99■■□□□ 1.43
SHANK2-207ENST00000425049 RXRBP28702 533 aa23.98■■□□□ 1.43
SHANK2-207ENST00000425049 HIRIP3Q9BW71 556 aaPredicted RBP23.98■■□□□ 1.43
SHANK2-207ENST00000425049 ANKARQ7Z5J8 1434 aa23.98■■□□□ 1.43
SHANK2-207ENST00000425049 PSME1Q06323 249 aa23.96■■□□□ 1.43
SHANK2-207ENST00000425049 KRT28Q7Z3Y7 464 aa23.95■■□□□ 1.42
SHANK2-207ENST00000425049 SPATA31A3Q5VYP0 1347 aa23.92■■□□□ 1.42
SHANK2-207ENST00000425049 RGPD8O14715 1765 aaPredicted RBP23.92■■□□□ 1.42
SHANK2-207ENST00000425049 KIAA1210Q9ULL0 1709 aa23.92■■□□□ 1.42
SHANK2-207ENST00000425049 TULP4Q9NRJ4 1543 aa23.91■■□□□ 1.42
SHANK2-207ENST00000425049 ARHGEF28Q8N1W1 1705 aaKnown RBP23.91■■□□□ 1.42
SHANK2-207ENST00000425049 WASLO00401 505 aaPredicted RBP23.91■■□□□ 1.42
SHANK2-207ENST00000425049 QTRT2Q9H974 415 aaKnown RBP23.91■■□□□ 1.42
SHANK2-207ENST00000425049 TNS3Q68CZ2 1445 aa23.91■■□□□ 1.42
SHANK2-207ENST00000425049 HAP1P54257 671 aaPredicted RBP23.9■■□□□ 1.42
SHANK2-207ENST00000425049 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
SHANK2-207ENST00000425049 USP21Q9UK80 565 aa23.9■■□□□ 1.42
SHANK2-207ENST00000425049 CDK12Q9NYV4 1490 aaPredicted RBP23.89■■□□□ 1.42
SHANK2-207ENST00000425049 USP32Q8NFA0 1604 aa23.88■■□□□ 1.41
SHANK2-207ENST00000425049 RBM6P78332 1123 aaKnown RBP23.88■■□□□ 1.41
SHANK2-207ENST00000425049 LMOD2Q6P5Q4 547 aa23.88■■□□□ 1.41
SHANK2-207ENST00000425049 SBNO1A3KN83 1393 aa23.88■■□□□ 1.41
SHANK2-207ENST00000425049 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
SHANK2-207ENST00000425049 GPRASP1Q5JY77 1395 aa23.87■■□□□ 1.41
SHANK2-207ENST00000425049 TRPC5Q9UL62 973 aaPredicted RBP23.86■■□□□ 1.41
SHANK2-207ENST00000425049 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
SHANK2-207ENST00000425049 FNBP4Q8N3X1 1017 aaPredicted RBP23.85■■□□□ 1.41
SHANK2-207ENST00000425049 PRR36Q9H6K5 1346 aa23.84■■□□□ 1.41
SHANK2-207ENST00000425049 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
SHANK2-207ENST00000425049 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
SHANK2-207ENST00000425049 PLEKHG5O94827 1062 aa23.83■■□□□ 1.41
SHANK2-207ENST00000425049 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
SHANK2-207ENST00000425049 NGDNQ8NEJ9 315 aaKnown RBP23.83■■□□□ 1.41
SHANK2-207ENST00000425049 MARF1Q9Y4F3 1742 aaKnown RBP23.81■■□□□ 1.4
SHANK2-207ENST00000425049 RGS12O14924 1447 aa23.8■■□□□ 1.4
SHANK2-207ENST00000425049 ITSN1Q15811 1721 aa23.8■■□□□ 1.4
SHANK2-207ENST00000425049 ATP7BP35670 1465 aa23.8■■□□□ 1.4
SHANK2-207ENST00000425049 NUDT16Q96DE0 195 aaKnown RBP23.79■■□□□ 1.4
SHANK2-207ENST00000425049 CDK19Q9BWU1 502 aa23.79■■□□□ 1.4
SHANK2-207ENST00000425049 CENPJQ9HC77 1338 aaPredicted RBP23.79■■□□□ 1.4
SHANK2-207ENST00000425049 ATRNO75882 1429 aa23.78■■□□□ 1.4
SHANK2-207ENST00000425049 CABLES1Q8TDN4 633 aa23.77■■□□□ 1.4
SHANK2-207ENST00000425049 PAK3O75914 559 aaPredicted RBP23.76■■□□□ 1.39
SHANK2-207ENST00000425049 TRIM26Q12899 539 aaPredicted RBP23.76■■□□□ 1.39
SHANK2-207ENST00000425049 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
SHANK2-207ENST00000425049 TRPM3Q9HCF6 1732 aaPredicted RBP23.74■■□□□ 1.39
SHANK2-207ENST00000425049 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
SHANK2-207ENST00000425049 SRPK2P78362 688 aaKnown RBP23.73■■□□□ 1.39
SHANK2-207ENST00000425049 UNC5CLQ8IV45 518 aa23.73■■□□□ 1.39
SHANK2-207ENST00000425049 CCDC61Q9Y6R9 512 aa23.73■■□□□ 1.39
SHANK2-207ENST00000425049 UPF1Q92900 1129 aaKnown RBP eCLIP23.72■■□□□ 1.39
SHANK2-207ENST00000425049 SLIT2O94813 1529 aa23.72■■□□□ 1.39
SHANK2-207ENST00000425049 ABCA3Q99758 1704 aa23.71■■□□□ 1.39
SHANK2-207ENST00000425049 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.7■■□□□ 1.39
SHANK2-207ENST00000425049 TRPM1Q7Z4N2 1603 aa23.7■■□□□ 1.39
SHANK2-207ENST00000425049 GJD4Q96KN9 370 aaPredicted RBP23.7■■□□□ 1.38
SHANK2-207ENST00000425049 ALS2Q96Q42 1657 aa23.7■■□□□ 1.38
SHANK2-207ENST00000425049 QRICH2Q9H0J4 1663 aa23.7■■□□□ 1.38
SHANK2-207ENST00000425049 TONSLQ96HA7 1378 aa23.69■■□□□ 1.38
SHANK2-207ENST00000425049 TOPAZ1Q8N9V7 1692 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms