RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
TMEM248-204ENST00000424964 TRPM1Q7Z4N2 1603 aa21.15■□□□□ 0.98
TMEM248-204ENST00000424964 NALCNQ8IZF0 1738 aa21.15■□□□□ 0.98
TMEM248-204ENST00000424964 DLC1Q96QB1 1528 aa21.14■□□□□ 0.98
TMEM248-204ENST00000424964 ROCK2O75116 1388 aaKnown RBP21.14■□□□□ 0.98
TMEM248-204ENST00000424964 SLAIN2Q9P270 581 aa21.14■□□□□ 0.97
TMEM248-204ENST00000424964 DCCP43146 1447 aa21.12■□□□□ 0.97
TMEM248-204ENST00000424964 ARHGEF28Q8N1W1 1705 aaKnown RBP21.08■□□□□ 0.97
TMEM248-204ENST00000424964 CARD11Q9BXL7 1154 aa21.08■□□□□ 0.97
TMEM248-204ENST00000424964 MINK1Q8N4C8 1332 aaPredicted RBP21.07■□□□□ 0.96
TMEM248-204ENST00000424964 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
TMEM248-204ENST00000424964 HIRIP3Q9BW71 556 aaPredicted RBP21.05■□□□□ 0.96
TMEM248-204ENST00000424964 MST1RQ04912 1400 aa21.04■□□□□ 0.96
TMEM248-204ENST00000424964 NUTM2FA1L443 756 aa21.04■□□□□ 0.96
TMEM248-204ENST00000424964 GPRASP1Q5JY77 1395 aa21.04■□□□□ 0.96
TMEM248-204ENST00000424964 CDC42BPGQ6DT37 1551 aa21.03■□□□□ 0.96
TMEM248-204ENST00000424964 CENPJQ9HC77 1338 aaPredicted RBP21.03■□□□□ 0.96
TMEM248-204ENST00000424964 ROBO1Q9Y6N7 1651 aa21.02■□□□□ 0.96
TMEM248-204ENST00000424964 HSPA1LP34931 641 aa21.01■□□□□ 0.95
TMEM248-204ENST00000424964 C1orf167Q5SNV9 1468 aa21.01■□□□□ 0.95
TMEM248-204ENST00000424964 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
TMEM248-204ENST00000424964 BRINP3Q76B58 766 aa21■□□□□ 0.95
TMEM248-204ENST00000424964 WASLO00401 505 aaPredicted RBP20.98■□□□□ 0.95
TMEM248-204ENST00000424964 ESCO1Q5FWF5 840 aa20.98■□□□□ 0.95
TMEM248-204ENST00000424964 ORAI2Q96SN7 254 aa20.98■□□□□ 0.95
TMEM248-204ENST00000424964 FMN2Q9NZ56 1722 aa20.98■□□□□ 0.95
TMEM248-204ENST00000424964 ADGRB2O60241 1585 aa20.97■□□□□ 0.95
TMEM248-204ENST00000424964 QRICH2Q9H0J4 1663 aa20.96■□□□□ 0.95
TMEM248-204ENST00000424964 CDK19Q9BWU1 502 aa20.95■□□□□ 0.94
TMEM248-204ENST00000424964 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
TMEM248-204ENST00000424964 DDX17Q92841 729 aaKnown RBP20.92■□□□□ 0.94
TMEM248-204ENST00000424964 PHLPP1O60346 1717 aa20.92■□□□□ 0.94
TMEM248-204ENST00000424964 SRPK2P78362 688 aaKnown RBP20.91■□□□□ 0.94
TMEM248-204ENST00000424964 ANKARQ7Z5J8 1434 aa20.9■□□□□ 0.94
TMEM248-204ENST00000424964 TULP4Q9NRJ4 1543 aa20.89■□□□□ 0.94
TMEM248-204ENST00000424964 EVC2Q86UK5 1308 aa20.89■□□□□ 0.93
TMEM248-204ENST00000424964 PRR36Q9H6K5 1346 aa20.89■□□□□ 0.93
TMEM248-204ENST00000424964 ST20-MTHFSA0A0A6YYL1 179 aa20.89■□□□□ 0.93
TMEM248-204ENST00000424964 NUDT16Q96DE0 195 aaKnown RBP20.89■□□□□ 0.93
TMEM248-204ENST00000424964 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
TMEM248-204ENST00000424964 USP47Q96K76 1375 aa20.88■□□□□ 0.93
TMEM248-204ENST00000424964 FOXO3O43524 673 aa20.88■□□□□ 0.93
TMEM248-204ENST00000424964 CABP2Q9NPB3 220 aa20.88■□□□□ 0.93
TMEM248-204ENST00000424964 AHDC1Q5TGY3 1603 aaPredicted RBP20.88■□□□□ 0.93
TMEM248-204ENST00000424964 USP32Q8NFA0 1604 aa20.87■□□□□ 0.93
TMEM248-204ENST00000424964 PMFBP1Q8TBY8 1022 aa20.87■□□□□ 0.93
TMEM248-204ENST00000424964 NHSL1Q5SYE7 1610 aa20.86■□□□□ 0.93
TMEM248-204ENST00000424964 NPHP3Q7Z494 1330 aa20.86■□□□□ 0.93
TMEM248-204ENST00000424964 KIF1AQ12756 1690 aa20.84■□□□□ 0.93
TMEM248-204ENST00000424964 XPCQ01831 940 aaPredicted RBP20.84■□□□□ 0.93
TMEM248-204ENST00000424964 CCDC61Q9Y6R9 512 aa20.84■□□□□ 0.93
TMEM248-204ENST00000424964 SBNO2Q9Y2G9 1366 aa20.84■□□□□ 0.93
TMEM248-204ENST00000424964 ATP7BP35670 1465 aa20.83■□□□□ 0.93
TMEM248-204ENST00000424964 COL16A1Q07092 1604 aaPredicted RBP20.83■□□□□ 0.93
TMEM248-204ENST00000424964 NGDNQ8NEJ9 315 aaKnown RBP20.83■□□□□ 0.93
TMEM248-204ENST00000424964 PSME1Q06323 249 aa20.82■□□□□ 0.92
TMEM248-204ENST00000424964 LRRC59Q96AG4 307 aaKnown RBP20.82■□□□□ 0.92
TMEM248-204ENST00000424964 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
TMEM248-204ENST00000424964 SOS2Q07890 1332 aaPredicted RBP20.81■□□□□ 0.92
TMEM248-204ENST00000424964 SLC24A1O60721 1099 aa20.81■□□□□ 0.92
TMEM248-204ENST00000424964 KRT28Q7Z3Y7 464 aa20.81■□□□□ 0.92
TMEM248-204ENST00000424964 TESK2Q96S53 571 aa20.81■□□□□ 0.92
TMEM248-204ENST00000424964 EIF4G2P78344 907 aaKnown RBP eCLIP20.8■□□□□ 0.92
TMEM248-204ENST00000424964 JCADQ9P266 1359 aa20.8■□□□□ 0.92
TMEM248-204ENST00000424964 PPIP5K1Q6PFW1 1433 aa20.78■□□□□ 0.92
TMEM248-204ENST00000424964 PLEKHG3A1L390 1219 aa20.77■□□□□ 0.92
TMEM248-204ENST00000424964 TMF1P82094 1093 aa20.77■□□□□ 0.92
TMEM248-204ENST00000424964 CABP1Q9NZU7 370 aa20.77■□□□□ 0.92
TMEM248-204ENST00000424964 PXDNQ92626 1479 aa20.76■□□□□ 0.91
TMEM248-204ENST00000424964 ATAD2Q6PL18 1390 aa20.76■□□□□ 0.91
TMEM248-204ENST00000424964 HSPA5P11021 654 aaKnown RBP20.76■□□□□ 0.91
TMEM248-204ENST00000424964 TOPAZ1Q8N9V7 1692 aa20.76■□□□□ 0.91
TMEM248-204ENST00000424964 ACEP12821 1306 aa20.76■□□□□ 0.91
TMEM248-204ENST00000424964 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
TMEM248-204ENST00000424964 TMC1Q8TDI8 760 aa20.72■□□□□ 0.91
TMEM248-204ENST00000424964 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
TMEM248-204ENST00000424964 POLR3AO14802 1390 aaPredicted RBP20.72■□□□□ 0.91
TMEM248-204ENST00000424964 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
TMEM248-204ENST00000424964 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
TMEM248-204ENST00000424964 NUTM2BA6NNL0 878 aaPredicted RBP20.71■□□□□ 0.91
TMEM248-204ENST00000424964 NUTM2EB1AL46 878 aaPredicted RBP20.71■□□□□ 0.91
TMEM248-204ENST00000424964 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
TMEM248-204ENST00000424964 NUTM2AQ8IVF1 878 aaPredicted RBP20.71■□□□□ 0.91
TMEM248-204ENST00000424964 SPATA31A3Q5VYP0 1347 aa20.71■□□□□ 0.91
TMEM248-204ENST00000424964 PNPLA6Q8IY17 1366 aa20.71■□□□□ 0.91
TMEM248-204ENST00000424964 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
TMEM248-204ENST00000424964 SPATA31A6Q5VVP1 1343 aa20.7■□□□□ 0.9
TMEM248-204ENST00000424964 SBNO1A3KN83 1393 aa20.7■□□□□ 0.9
TMEM248-204ENST00000424964 TNS3Q68CZ2 1445 aa20.68■□□□□ 0.9
TMEM248-204ENST00000424964 PLEKHG5O94827 1062 aa20.67■□□□□ 0.9
TMEM248-204ENST00000424964 SLC12A5Q9H2X9 1139 aa20.67■□□□□ 0.9
TMEM248-204ENST00000424964 POLR3GLQ9BT43 218 aa20.66■□□□□ 0.9
TMEM248-204ENST00000424964 ZNF692Q9BU19 519 aaPredicted RBP20.66■□□□□ 0.9
TMEM248-204ENST00000424964 TRPM3Q9HCF6 1732 aaPredicted RBP20.65■□□□□ 0.9
TMEM248-204ENST00000424964 MEX3CQ5U5Q3 659 aaKnown RBP20.65■□□□□ 0.9
TMEM248-204ENST00000424964 ARHGEF10O15013 1369 aa20.64■□□□□ 0.89
TMEM248-204ENST00000424964 HDGFL2Q7Z4V5 671 aaPredicted RBP20.64■□□□□ 0.89
TMEM248-204ENST00000424964 MED1Q15648 1581 aaPredicted RBP20.63■□□□□ 0.89
TMEM248-204ENST00000424964 TERF2IPQ9NYB0 399 aa20.63■□□□□ 0.89
TMEM248-204ENST00000424964 USP6P35125 1406 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms