RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 NAIPQ13075 1403 aa23.68■■□□□ 1.38
RPUSD3-204ENST00000424438 ITGAEP38570 1179 aa23.68■■□□□ 1.38
RPUSD3-204ENST00000424438 PPLO60437 1756 aa23.68■■□□□ 1.38
RPUSD3-204ENST00000424438 ATRNO75882 1429 aa23.67■■□□□ 1.38
RPUSD3-204ENST00000424438 MYOM2P54296 1465 aa23.67■■□□□ 1.38
RPUSD3-204ENST00000424438 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
RPUSD3-204ENST00000424438 MARF1Q9Y4F3 1742 aaKnown RBP23.65■■□□□ 1.38
RPUSD3-204ENST00000424438 ORAI2Q96SN7 254 aa23.65■■□□□ 1.38
RPUSD3-204ENST00000424438 NPHP3Q7Z494 1330 aa23.63■■□□□ 1.37
RPUSD3-204ENST00000424438 PXDNQ92626 1479 aa23.61■■□□□ 1.37
RPUSD3-204ENST00000424438 TECPR2O15040 1411 aa23.6■■□□□ 1.37
RPUSD3-204ENST00000424438 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.6■■□□□ 1.37
RPUSD3-204ENST00000424438 BCL9LQ86UU0 1499 aa23.58■■□□□ 1.37
RPUSD3-204ENST00000424438 EP400Q96L91 3159 aa23.56■■□□□ 1.36
RPUSD3-204ENST00000424438 LRPPRCP42704 1394 aaKnown RBP23.56■■□□□ 1.36
RPUSD3-204ENST00000424438 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
RPUSD3-204ENST00000424438 ABCC11Q96J66 1382 aa23.52■■□□□ 1.36
RPUSD3-204ENST00000424438 KIF1AQ12756 1690 aa23.51■■□□□ 1.35
RPUSD3-204ENST00000424438 ESCO1Q5FWF5 840 aa23.51■■□□□ 1.35
RPUSD3-204ENST00000424438 IFT172Q9UG01 1749 aa23.5■■□□□ 1.35
RPUSD3-204ENST00000424438 SF3B2Q13435 895 aaKnown RBP23.5■■□□□ 1.35
RPUSD3-204ENST00000424438 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
RPUSD3-204ENST00000424438 ANKRD30BQ9BXX2 1392 aa23.5■■□□□ 1.35
RPUSD3-204ENST00000424438 SLIT2O94813 1529 aa23.49■■□□□ 1.35
RPUSD3-204ENST00000424438 GJD4Q96KN9 370 aaPredicted RBP23.49■■□□□ 1.35
RPUSD3-204ENST00000424438 FMN2Q9NZ56 1722 aa23.48■■□□□ 1.35
RPUSD3-204ENST00000424438 BLMP54132 1417 aaPredicted RBP23.48■■□□□ 1.35
RPUSD3-204ENST00000424438 SPATA31E1Q6ZUB1 1445 aa23.47■■□□□ 1.35
RPUSD3-204ENST00000424438 CCDC144AA2RUR9 1427 aa23.46■■□□□ 1.35
RPUSD3-204ENST00000424438 FOXO3O43524 673 aa23.46■■□□□ 1.35
RPUSD3-204ENST00000424438 GLI3P10071 1580 aa23.44■■□□□ 1.34
RPUSD3-204ENST00000424438 SPATA31A3Q5VYP0 1347 aa23.44■■□□□ 1.34
RPUSD3-204ENST00000424438 SIRT1Q96EB6 747 aa23.44■■□□□ 1.34
RPUSD3-204ENST00000424438 USP32Q8NFA0 1604 aa23.44■■□□□ 1.34
RPUSD3-204ENST00000424438 ADGRF5Q8IZF2 1346 aa23.43■■□□□ 1.34
RPUSD3-204ENST00000424438 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
RPUSD3-204ENST00000424438 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
RPUSD3-204ENST00000424438 PIK3C2GO75747 1445 aa23.42■■□□□ 1.34
RPUSD3-204ENST00000424438 DEFB132Q7Z7B7 95 aa23.41■■□□□ 1.34
RPUSD3-204ENST00000424438 NWD2Q9ULI1 1742 aa23.41■■□□□ 1.34
RPUSD3-204ENST00000424438 PPARGC1BQ86YN6 1023 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-204ENST00000424438 WAPLQ7Z5K2 1190 aa23.38■■□□□ 1.33
RPUSD3-204ENST00000424438 YTHDC2Q9H6S0 1430 aaKnown RBP23.38■■□□□ 1.33
RPUSD3-204ENST00000424438 BRWD3Q6RI45 1802 aa23.38■■□□□ 1.33
RPUSD3-204ENST00000424438 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
RPUSD3-204ENST00000424438 TNS3Q68CZ2 1445 aa23.36■■□□□ 1.33
RPUSD3-204ENST00000424438 LRP5O75197 1615 aa23.36■■□□□ 1.33
RPUSD3-204ENST00000424438 ONECUT3O60422 494 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-204ENST00000424438 SBNO1A3KN83 1393 aa23.35■■□□□ 1.33
RPUSD3-204ENST00000424438 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
RPUSD3-204ENST00000424438 STK26Q9P289 416 aa23.34■■□□□ 1.33
RPUSD3-204ENST00000424438 ABCA3Q99758 1704 aa23.33■■□□□ 1.33
RPUSD3-204ENST00000424438 NRXN1Q9ULB1 1477 aa23.33■■□□□ 1.33
RPUSD3-204ENST00000424438 VPS72Q15906 364 aa23.33■■□□□ 1.33
RPUSD3-204ENST00000424438 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
RPUSD3-204ENST00000424438 ACIN1Q9UKV3 1341 aaKnown RBP23.33■■□□□ 1.32
RPUSD3-204ENST00000424438 PLCH1Q4KWH8 1693 aa23.32■■□□□ 1.32
RPUSD3-204ENST00000424438 RGPD8O14715 1765 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-204ENST00000424438 ARHGEF10O15013 1369 aa23.31■■□□□ 1.32
RPUSD3-204ENST00000424438 PSME1Q06323 249 aa23.31■■□□□ 1.32
RPUSD3-204ENST00000424438 SEPT12Q8IYM1 358 aa23.3■■□□□ 1.32
RPUSD3-204ENST00000424438 C14orf93Q9H972 538 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-204ENST00000424438 NUTM2FA1L443 756 aa23.29■■□□□ 1.32
RPUSD3-204ENST00000424438 PSDA5PKW4 1024 aaPredicted RBP23.29■■□□□ 1.32
RPUSD3-204ENST00000424438 RGL3Q3MIN7 710 aa23.29■■□□□ 1.32
RPUSD3-204ENST00000424438 TMEM132EQ6IEE7 984 aa23.29■■□□□ 1.32
RPUSD3-204ENST00000424438 PHF8Q9UPP1 1060 aa23.29■■□□□ 1.32
RPUSD3-204ENST00000424438 ANKARQ7Z5J8 1434 aa23.28■■□□□ 1.32
RPUSD3-204ENST00000424438 BAG6P46379 1132 aa23.28■■□□□ 1.32
RPUSD3-204ENST00000424438 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
RPUSD3-204ENST00000424438 HRCP23327 699 aa23.27■■□□□ 1.32
RPUSD3-204ENST00000424438 ADGRB2O60241 1585 aa23.27■■□□□ 1.32
RPUSD3-204ENST00000424438 MPHOSPH9Q99550 1183 aa23.26■■□□□ 1.31
RPUSD3-204ENST00000424438 DHX57Q6P158 1386 aaKnown RBP23.26■■□□□ 1.31
RPUSD3-204ENST00000424438 HAP1P54257 671 aaPredicted RBP23.25■■□□□ 1.31
RPUSD3-204ENST00000424438 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-204ENST00000424438 KRT27Q7Z3Y8 459 aa23.24■■□□□ 1.31
RPUSD3-204ENST00000424438 NRAPQ86VF7 1730 aa23.23■■□□□ 1.31
RPUSD3-204ENST00000424438 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
RPUSD3-204ENST00000424438 A0A0G2JS52 829 aa23.21■■□□□ 1.31
RPUSD3-204ENST00000424438 MYT1Q01538 1121 aa23.21■■□□□ 1.31
RPUSD3-204ENST00000424438 ALS2Q96Q42 1657 aa23.19■■□□□ 1.3
RPUSD3-204ENST00000424438 COL14A1Q05707 1796 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-204ENST00000424438 EIF3AQ14152 1382 aaKnown RBP23.18■■□□□ 1.3
RPUSD3-204ENST00000424438 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
RPUSD3-204ENST00000424438 FAM83GA6ND36 823 aa23.16■■□□□ 1.3
RPUSD3-204ENST00000424438 PRAM1Q96QH2 718 aa23.16■■□□□ 1.3
RPUSD3-204ENST00000424438 RGPD1P0DJD0 1748 aa23.16■■□□□ 1.3
RPUSD3-204ENST00000424438 ADGRB1O14514 1584 aa23.15■■□□□ 1.3
RPUSD3-204ENST00000424438 CFAP70Q5T0N1 1121 aa23.15■■□□□ 1.3
RPUSD3-204ENST00000424438 DISP2A7MBM2 1401 aa23.15■■□□□ 1.3
RPUSD3-204ENST00000424438 CRYBG1Q9Y4K1 1723 aa23.13■■□□□ 1.29
RPUSD3-204ENST00000424438 YY1P25490 414 aa23.13■■□□□ 1.29
RPUSD3-204ENST00000424438 R3HDM1Q15032 1099 aaKnown RBP23.13■■□□□ 1.29
RPUSD3-204ENST00000424438 THSD7AQ9UPZ6 1657 aa23.12■■□□□ 1.29
RPUSD3-204ENST00000424438 TULP4Q9NRJ4 1543 aa23.12■■□□□ 1.29
RPUSD3-204ENST00000424438 GPRASP1Q5JY77 1395 aa23.12■■□□□ 1.29
RPUSD3-204ENST00000424438 EN1Q05925 392 aaPredicted RBP23.11■■□□□ 1.29
RPUSD3-204ENST00000424438 PLEKHG5O94827 1062 aa23.1■■□□□ 1.29
RPUSD3-204ENST00000424438 LMOD2Q6P5Q4 547 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms