RNA–Protein interactions for RNA: ENST00000424235.1

SNHG17-205, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 764 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-205ENST00000424235 NUTM2FA1L443 756 aa23.5■■□□□ 1.35
SNHG17-205ENST00000424235 DCAF11Q8TEB1 546 aa23.5■■□□□ 1.35
SNHG17-205ENST00000424235 DHX57Q6P158 1386 aaKnown RBP23.5■■□□□ 1.35
SNHG17-205ENST00000424235 PRAG1Q86YV5 1406 aa23.5■■□□□ 1.35
SNHG17-205ENST00000424235 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
SNHG17-205ENST00000424235 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
SNHG17-205ENST00000424235 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
SNHG17-205ENST00000424235 LRRC59Q96AG4 307 aaKnown RBP23.47■■□□□ 1.35
SNHG17-205ENST00000424235 ORAI2Q96SN7 254 aa23.47■■□□□ 1.35
SNHG17-205ENST00000424235 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
SNHG17-205ENST00000424235 LAMC1P11047 1609 aa23.47■■□□□ 1.35
SNHG17-205ENST00000424235 NHSL1Q5SYE7 1610 aa23.47■■□□□ 1.35
SNHG17-205ENST00000424235 RXRBP28702 533 aa23.46■■□□□ 1.35
SNHG17-205ENST00000424235 ABCC11Q96J66 1382 aa23.46■■□□□ 1.35
SNHG17-205ENST00000424235 TECPR2O15040 1411 aa23.45■■□□□ 1.34
SNHG17-205ENST00000424235 PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
SNHG17-205ENST00000424235 POGKQ9P215 609 aa23.45■■□□□ 1.34
SNHG17-205ENST00000424235 CDC42BPGQ6DT37 1551 aa23.44■■□□□ 1.34
SNHG17-205ENST00000424235 AFF2P51816 1311 aa23.43■■□□□ 1.34
SNHG17-205ENST00000424235 KNDC1Q76NI1 1749 aa23.43■■□□□ 1.34
SNHG17-205ENST00000424235 CDK12Q9NYV4 1490 aaPredicted RBP23.43■■□□□ 1.34
SNHG17-205ENST00000424235 NRXN1Q9ULB1 1477 aa23.43■■□□□ 1.34
SNHG17-205ENST00000424235 PRAM1Q96QH2 718 aa23.41■■□□□ 1.34
SNHG17-205ENST00000424235 TRAK1Q9UPV9 953 aa23.39■■□□□ 1.33
SNHG17-205ENST00000424235 NPHP3Q7Z494 1330 aa23.38■■□□□ 1.33
SNHG17-205ENST00000424235 XPCQ01831 940 aaPredicted RBP23.38■■□□□ 1.33
SNHG17-205ENST00000424235 RGS12O14924 1447 aa23.37■■□□□ 1.33
SNHG17-205ENST00000424235 PNPLA6Q8IY17 1366 aa23.37■■□□□ 1.33
SNHG17-205ENST00000424235 FOXO3O43524 673 aa23.35■■□□□ 1.33
SNHG17-205ENST00000424235 ADAMTS2O95450 1211 aa23.35■■□□□ 1.33
SNHG17-205ENST00000424235 STAC3Q96MF2 364 aa23.35■■□□□ 1.33
SNHG17-205ENST00000424235 C8orf37Q96NL8 207 aa23.35■■□□□ 1.33
SNHG17-205ENST00000424235 SIRT1Q96EB6 747 aa23.33■■□□□ 1.33
SNHG17-205ENST00000424235 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.32
SNHG17-205ENST00000424235 HIRIP3Q9BW71 556 aaPredicted RBP23.32■■□□□ 1.32
SNHG17-205ENST00000424235 SRCAPQ6ZRS2 3230 aa23.31■■□□□ 1.32
SNHG17-205ENST00000424235 MINK1Q8N4C8 1332 aaPredicted RBP23.31■■□□□ 1.32
SNHG17-205ENST00000424235 QTRT2Q9H974 415 aaKnown RBP23.3■■□□□ 1.32
SNHG17-205ENST00000424235 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
SNHG17-205ENST00000424235 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
SNHG17-205ENST00000424235 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
SNHG17-205ENST00000424235 PLEKHG5O94827 1062 aa23.28■■□□□ 1.32
SNHG17-205ENST00000424235 NGLY1Q96IV0 654 aa23.28■■□□□ 1.32
SNHG17-205ENST00000424235 RBM6P78332 1123 aaKnown RBP23.27■■□□□ 1.32
SNHG17-205ENST00000424235 HAP1P54257 671 aaPredicted RBP23.26■■□□□ 1.31
SNHG17-205ENST00000424235 NEUROD1Q13562 356 aa23.26■■□□□ 1.31
SNHG17-205ENST00000424235 LMOD2Q6P5Q4 547 aa23.26■■□□□ 1.31
SNHG17-205ENST00000424235 PHF8Q9UPP1 1060 aa23.26■■□□□ 1.31
SNHG17-205ENST00000424235 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
SNHG17-205ENST00000424235 PXDNQ92626 1479 aa23.24■■□□□ 1.31
SNHG17-205ENST00000424235 PSME1Q06323 249 aa23.23■■□□□ 1.31
SNHG17-205ENST00000424235 KRT28Q7Z3Y7 464 aa23.23■■□□□ 1.31
SNHG17-205ENST00000424235 EIF3AQ14152 1382 aaKnown RBP23.23■■□□□ 1.31
SNHG17-205ENST00000424235 PMFBP1Q8TBY8 1022 aa23.22■■□□□ 1.31
SNHG17-205ENST00000424235 SIN3AQ96ST3 1273 aa23.19■■□□□ 1.3
SNHG17-205ENST00000424235 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
SNHG17-205ENST00000424235 ADGRB2O60241 1585 aa23.18■■□□□ 1.3
SNHG17-205ENST00000424235 EP400Q96L91 3159 aa23.17■■□□□ 1.3
SNHG17-205ENST00000424235 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
SNHG17-205ENST00000424235 USP21Q9UK80 565 aa23.17■■□□□ 1.3
SNHG17-205ENST00000424235 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
SNHG17-205ENST00000424235 ATAD2Q6PL18 1390 aa23.15■■□□□ 1.3
SNHG17-205ENST00000424235 SPATA31A3Q5VYP0 1347 aa23.15■■□□□ 1.3
SNHG17-205ENST00000424235 NGDNQ8NEJ9 315 aaKnown RBP23.15■■□□□ 1.3
SNHG17-205ENST00000424235 L3MBTL2Q969R5 705 aa23.15■■□□□ 1.3
SNHG17-205ENST00000424235 COL22A1Q8NFW1 1626 aaPredicted RBP23.15■■□□□ 1.3
SNHG17-205ENST00000424235 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.3
SNHG17-205ENST00000424235 ARHGEF28Q8N1W1 1705 aaKnown RBP23.14■■□□□ 1.3
SNHG17-205ENST00000424235 NBPF1Q3BBV0 1214 aa23.14■■□□□ 1.29
SNHG17-205ENST00000424235 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
SNHG17-205ENST00000424235 TULP4Q9NRJ4 1543 aa23.13■■□□□ 1.29
SNHG17-205ENST00000424235 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
SNHG17-205ENST00000424235 KIAA1210Q9ULL0 1709 aa23.11■■□□□ 1.29
SNHG17-205ENST00000424235 ATRNO75882 1429 aa23.11■■□□□ 1.29
SNHG17-205ENST00000424235 PAK3O75914 559 aaPredicted RBP23.11■■□□□ 1.29
SNHG17-205ENST00000424235 TRPC5Q9UL62 973 aaPredicted RBP23.11■■□□□ 1.29
SNHG17-205ENST00000424235 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
SNHG17-205ENST00000424235 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
SNHG17-205ENST00000424235 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
SNHG17-205ENST00000424235 FNBP4Q8N3X1 1017 aaPredicted RBP23.09■■□□□ 1.29
SNHG17-205ENST00000424235 CABLES1Q8TDN4 633 aa23.09■■□□□ 1.29
SNHG17-205ENST00000424235 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.29
SNHG17-205ENST00000424235 NUDT16Q96DE0 195 aaKnown RBP23.08■■□□□ 1.29
SNHG17-205ENST00000424235 CDK19Q9BWU1 502 aa23.08■■□□□ 1.29
SNHG17-205ENST00000424235 SBNO1A3KN83 1393 aa23.08■■□□□ 1.29
SNHG17-205ENST00000424235 SRPK2P78362 688 aaKnown RBP23.07■■□□□ 1.28
SNHG17-205ENST00000424235 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
SNHG17-205ENST00000424235 ROCK2O75116 1388 aaKnown RBP23.05■■□□□ 1.28
SNHG17-205ENST00000424235 BCL9LQ86UU0 1499 aa23.04■■□□□ 1.28
SNHG17-205ENST00000424235 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
SNHG17-205ENST00000424235 CCDC9Q9Y3X0 531 aaKnown RBP23.03■■□□□ 1.28
SNHG17-205ENST00000424235 ITSN1Q15811 1721 aa23.02■■□□□ 1.28
SNHG17-205ENST00000424235 ATP7BP35670 1465 aa23.02■■□□□ 1.28
SNHG17-205ENST00000424235 ZRANB1Q9UGI0 708 aa23.01■■□□□ 1.27
SNHG17-205ENST00000424235 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
SNHG17-205ENST00000424235 UNC5CLQ8IV45 518 aa22.98■■□□□ 1.27
SNHG17-205ENST00000424235 CABP2Q9NPB3 220 aa22.98■■□□□ 1.27
SNHG17-205ENST00000424235 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.98■■□□□ 1.27
SNHG17-205ENST00000424235 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
SNHG17-205ENST00000424235 ACEP12821 1306 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms