RNA–Protein interactions for RNA: ENST00000424043.3

GAPDHP46-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 46, humanhuman

BASIC

Gene GAPDHP46, Length 994 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP46-201ENST00000424043 ZNF710Q8N1W2 664 aa12.15□□□□□ -0.46
GAPDHP46-201ENST00000424043 TNRQ92752 1358 aa12.15□□□□□ -0.46
GAPDHP46-201ENST00000424043 ANKLE2Q86XL3 938 aa12.14□□□□□ -0.47
GAPDHP46-201ENST00000424043 FAM135AQ9P2D6 1515 aa12.14□□□□□ -0.47
GAPDHP46-201ENST00000424043 TCOF1Q13428 1488 aaKnown RBP12.14□□□□□ -0.47
GAPDHP46-201ENST00000424043 TOM1O60784 492 aa12.13□□□□□ -0.47
GAPDHP46-201ENST00000424043 GPR153Q6NV75 609 aa12.13□□□□□ -0.47
GAPDHP46-201ENST00000424043 PLPP6Q8IY26 295 aa12.13□□□□□ -0.47
GAPDHP46-201ENST00000424043 CAMSAP2Q08AD1 1489 aa12.13□□□□□ -0.47
GAPDHP46-201ENST00000424043 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
GAPDHP46-201ENST00000424043 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
GAPDHP46-201ENST00000424043 FBXO31Q5XUX0 539 aaPredicted RBP12.12□□□□□ -0.47
GAPDHP46-201ENST00000424043 SPATA31D1Q6ZQQ2 1576 aa12.11□□□□□ -0.47
GAPDHP46-201ENST00000424043 PZPP20742 1482 aa12.11□□□□□ -0.47
GAPDHP46-201ENST00000424043 PDE4AP27815 886 aa12.11□□□□□ -0.47
GAPDHP46-201ENST00000424043 ARSIQ5FYB1 569 aa12.1□□□□□ -0.47
GAPDHP46-201ENST00000424043 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
GAPDHP46-201ENST00000424043 DNMT1P26358 1616 aaKnown RBP12.1□□□□□ -0.47
GAPDHP46-201ENST00000424043 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
GAPDHP46-201ENST00000424043 LARP6Q9BRS8 491 aaKnown RBP12.09□□□□□ -0.47
GAPDHP46-201ENST00000424043 MIA2Q96PC5 1412 aa12.09□□□□□ -0.47
GAPDHP46-201ENST00000424043 ARHGEF5Q12774 1597 aa12.09□□□□□ -0.47
GAPDHP46-201ENST00000424043 NLRP1Q9C000 1473 aa12.08□□□□□ -0.47
GAPDHP46-201ENST00000424043 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
GAPDHP46-201ENST00000424043 SLC34A2O95436 690 aa12.08□□□□□ -0.48
GAPDHP46-201ENST00000424043 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
GAPDHP46-201ENST00000424043 ZSWIM6Q9HCJ5 1215 aa12.08□□□□□ -0.48
GAPDHP46-201ENST00000424043 CPS1P31327 1500 aa12.07□□□□□ -0.48
GAPDHP46-201ENST00000424043 EMP3P54852 163 aa12.07□□□□□ -0.48
GAPDHP46-201ENST00000424043 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
GAPDHP46-201ENST00000424043 VPS8Q8N3P4 1428 aa12.07□□□□□ -0.48
GAPDHP46-201ENST00000424043 LRRC9Q6ZRR7 1453 aa12.07□□□□□ -0.48
GAPDHP46-201ENST00000424043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.06□□□□□ -0.48
GAPDHP46-201ENST00000424043 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
GAPDHP46-201ENST00000424043 SHANK2Q9UPX8 1470 aa12.06□□□□□ -0.48
GAPDHP46-201ENST00000424043 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
GAPDHP46-201ENST00000424043 PPP1R15BQ5SWA1 713 aa12.05□□□□□ -0.48
GAPDHP46-201ENST00000424043 NPHP4O75161 1426 aaPredicted RBP12.04□□□□□ -0.48
GAPDHP46-201ENST00000424043 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
GAPDHP46-201ENST00000424043 MFSD10Q14728 455 aa12.04□□□□□ -0.48
GAPDHP46-201ENST00000424043 PCDHGA4Q9Y5G9 962 aa12.04□□□□□ -0.48
GAPDHP46-201ENST00000424043 MYOM3Q5VTT5 1437 aa12.03□□□□□ -0.48
GAPDHP46-201ENST00000424043 LOC105371045A0A1W2PR82 267 aa12.02□□□□□ -0.49
GAPDHP46-201ENST00000424043 PTCD2Q8WV60 388 aaKnown RBP12.02□□□□□ -0.49
GAPDHP46-201ENST00000424043 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
GAPDHP46-201ENST00000424043 ZC3H13Q5T200 1668 aaKnown RBP12.02□□□□□ -0.49
GAPDHP46-201ENST00000424043 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 MAST1Q9Y2H9 1570 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 HSPA1LP34931 641 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 HS3ST6Q96QI5 342 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 EID1Q9Y6B2 187 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 KANK1Q14678 1352 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 MED14O60244 1454 aa12.01□□□□□ -0.49
GAPDHP46-201ENST00000424043 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
GAPDHP46-201ENST00000424043 KANK4Q5T7N3 995 aaPredicted RBP12□□□□□ -0.49
GAPDHP46-201ENST00000424043 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
GAPDHP46-201ENST00000424043 ABCC3O15438 1527 aa12□□□□□ -0.49
GAPDHP46-201ENST00000424043 DUOX2Q9NRD8 1548 aa12□□□□□ -0.49
GAPDHP46-201ENST00000424043 NEURL4Q96JN8 1562 aa12□□□□□ -0.49
GAPDHP46-201ENST00000424043 DEPDC5O75140 1603 aa12□□□□□ -0.49
GAPDHP46-201ENST00000424043 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
GAPDHP46-201ENST00000424043 NUDT7P0C024 238 aa11.99□□□□□ -0.49
GAPDHP46-201ENST00000424043 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
GAPDHP46-201ENST00000424043 TXNDC2Q86VQ3 553 aa11.98□□□□□ -0.49
GAPDHP46-201ENST00000424043 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
GAPDHP46-201ENST00000424043 RRP7BPQ9NSQ0 103 aa11.98□□□□□ -0.49
GAPDHP46-201ENST00000424043 IQGAP1P46940 1657 aa11.97□□□□□ -0.49
GAPDHP46-201ENST00000424043 KIF15Q9NS87 1388 aa11.97□□□□□ -0.49
GAPDHP46-201ENST00000424043 ERBB3P21860 1342 aa11.97□□□□□ -0.49
GAPDHP46-201ENST00000424043 OXER1Q8TDS5 423 aa11.97□□□□□ -0.49
GAPDHP46-201ENST00000424043 ERBINQ96RT1 1412 aa11.96□□□□□ -0.49
GAPDHP46-201ENST00000424043 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
GAPDHP46-201ENST00000424043 VWDEQ8N2E2 1590 aa11.96□□□□□ -0.5
GAPDHP46-201ENST00000424043 CFAP65Q6ZU64 1925 aaKnown RBP11.95□□□□□ -0.5
GAPDHP46-201ENST00000424043 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
GAPDHP46-201ENST00000424043 VARS2Q5ST30 1063 aaKnown RBP11.94□□□□□ -0.5
GAPDHP46-201ENST00000424043 EMILIN3Q9NT22 766 aa11.94□□□□□ -0.5
GAPDHP46-201ENST00000424043 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
GAPDHP46-201ENST00000424043 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
GAPDHP46-201ENST00000424043 ARHGAP31Q2M1Z3 1444 aa11.94□□□□□ -0.5
GAPDHP46-201ENST00000424043 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
GAPDHP46-201ENST00000424043 CEP152O94986 1710 aa11.92□□□□□ -0.5
GAPDHP46-201ENST00000424043 BCANQ96GW7 911 aa11.92□□□□□ -0.5
GAPDHP46-201ENST00000424043 CHIC2Q9UKJ5 165 aa11.92□□□□□ -0.5
GAPDHP46-201ENST00000424043 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
GAPDHP46-201ENST00000424043 ABCC5O15440 1437 aa11.92□□□□□ -0.5
GAPDHP46-201ENST00000424043 SYNMO15061 1565 aa11.92□□□□□ -0.5
GAPDHP46-201ENST00000424043 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 PTPN23Q9H3S7 1636 aa11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 HDGFP51858 240 aaKnown RBP11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 PLCB2Q00722 1185 aa11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 DAPK1P53355 1430 aa11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 MED1Q15648 1581 aaPredicted RBP11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
GAPDHP46-201ENST00000424043 MROH1Q8NDA8 1641 aa11.9□□□□□ -0.5
GAPDHP46-201ENST00000424043 LTKP29376 864 aa11.9□□□□□ -0.5
GAPDHP46-201ENST00000424043 SLIT1O75093 1534 aa11.9□□□□□ -0.5
GAPDHP46-201ENST00000424043 PRDM15P57071 1507 aaPredicted RBP11.9□□□□□ -0.5
GAPDHP46-201ENST00000424043 TBC1D12O60347 775 aa11.89□□□□□ -0.51
GAPDHP46-201ENST00000424043 TMEM2Q9UHN6 1383 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms