RNA–Protein interactions for RNA: ENST00000423611.5

ACAA1-206, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 3

Gene ACAA1, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-206ENST00000423611 SIN3AQ96ST3 1273 aa29.15■■■□□ 2.26
ACAA1-206ENST00000423611 C1orf167Q5SNV9 1468 aa29.15■■■□□ 2.26
ACAA1-206ENST00000423611 FMN2Q9NZ56 1722 aa29.13■■■□□ 2.25
ACAA1-206ENST00000423611 MED1Q15648 1581 aaPredicted RBP29.13■■■□□ 2.25
ACAA1-206ENST00000423611 ARHGEF28Q8N1W1 1705 aaKnown RBP29.11■■■□□ 2.25
ACAA1-206ENST00000423611 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
ACAA1-206ENST00000423611 L3MBTL2Q969R5 705 aa29.09■■■□□ 2.25
ACAA1-206ENST00000423611 SHPRHQ149N8 1683 aa29.05■■■□□ 2.24
ACAA1-206ENST00000423611 PRAM1Q96QH2 718 aa29.04■■■□□ 2.24
ACAA1-206ENST00000423611 TRPM1Q7Z4N2 1603 aa29.04■■■□□ 2.24
ACAA1-206ENST00000423611 JCADQ9P266 1359 aa29.01■■■□□ 2.23
ACAA1-206ENST00000423611 NEUROD1Q13562 356 aa29■■■□□ 2.23
ACAA1-206ENST00000423611 TRAK1Q9UPV9 953 aa29■■■□□ 2.23
ACAA1-206ENST00000423611 DISP3Q9P2K9 1392 aa29■■■□□ 2.23
ACAA1-206ENST00000423611 RGPD8O14715 1765 aaPredicted RBP28.99■■■□□ 2.23
ACAA1-206ENST00000423611 ORAI2Q96SN7 254 aa28.98■■■□□ 2.23
ACAA1-206ENST00000423611 USP32Q8NFA0 1604 aa28.97■■■□□ 2.23
ACAA1-206ENST00000423611 NBPF1Q3BBV0 1214 aa28.96■■■□□ 2.23
ACAA1-206ENST00000423611 KIF1AQ12756 1690 aa28.96■■■□□ 2.23
ACAA1-206ENST00000423611 POGKQ9P215 609 aa28.95■■■□□ 2.22
ACAA1-206ENST00000423611 SOS2Q07890 1332 aaPredicted RBP28.93■■■□□ 2.22
ACAA1-206ENST00000423611 SAFB2Q14151 953 aaKnown RBP eCLIP28.91■■■□□ 2.22
ACAA1-206ENST00000423611 ANKARQ7Z5J8 1434 aa28.91■■■□□ 2.22
ACAA1-206ENST00000423611 DDX17Q92841 729 aaKnown RBP28.9■■■□□ 2.22
ACAA1-206ENST00000423611 PXDNQ92626 1479 aa28.9■■■□□ 2.22
ACAA1-206ENST00000423611 ESCO1Q5FWF5 840 aa28.89■■■□□ 2.22
ACAA1-206ENST00000423611 SPATA31A6Q5VVP1 1343 aa28.89■■■□□ 2.21
ACAA1-206ENST00000423611 PCGF6Q9BYE7 350 aa28.88■■■□□ 2.21
ACAA1-206ENST00000423611 TULP4Q9NRJ4 1543 aa28.88■■■□□ 2.21
ACAA1-206ENST00000423611 LRRC59Q96AG4 307 aaKnown RBP28.87■■■□□ 2.21
ACAA1-206ENST00000423611 NPHP3Q7Z494 1330 aa28.86■■■□□ 2.21
ACAA1-206ENST00000423611 LRP6O75581 1613 aa28.86■■■□□ 2.21
ACAA1-206ENST00000423611 GPRASP1Q5JY77 1395 aa28.86■■■□□ 2.21
ACAA1-206ENST00000423611 TONSLQ96HA7 1378 aa28.86■■■□□ 2.21
ACAA1-206ENST00000423611 NUTM2FA1L443 756 aa28.85■■■□□ 2.21
ACAA1-206ENST00000423611 NBPF8Q3BBV2 869 aa28.85■■■□□ 2.21
ACAA1-206ENST00000423611 COL22A1Q8NFW1 1626 aaPredicted RBP28.84■■■□□ 2.21
ACAA1-206ENST00000423611 MINK1Q8N4C8 1332 aaPredicted RBP28.84■■■□□ 2.21
ACAA1-206ENST00000423611 EIF3AQ14152 1382 aaKnown RBP28.84■■■□□ 2.21
ACAA1-206ENST00000423611 PNPLA6Q8IY17 1366 aa28.84■■■□□ 2.21
ACAA1-206ENST00000423611 QRICH2Q9H0J4 1663 aa28.83■■■□□ 2.21
ACAA1-206ENST00000423611 WASLO00401 505 aaPredicted RBP28.83■■■□□ 2.21
ACAA1-206ENST00000423611 HIRIP3Q9BW71 556 aaPredicted RBP28.82■■■□□ 2.2
ACAA1-206ENST00000423611 CLSPNQ9HAW4 1339 aa28.82■■■□□ 2.2
ACAA1-206ENST00000423611 ITSN1Q15811 1721 aa28.82■■■□□ 2.2
ACAA1-206ENST00000423611 ATP7BP35670 1465 aa28.79■■■□□ 2.2
ACAA1-206ENST00000423611 RALGAPBQ86X10 1494 aa28.79■■■□□ 2.2
ACAA1-206ENST00000423611 ROCK2O75116 1388 aaKnown RBP28.79■■■□□ 2.2
ACAA1-206ENST00000423611 PRR36Q9H6K5 1346 aa28.79■■■□□ 2.2
ACAA1-206ENST00000423611 FOXO3O43524 673 aa28.79■■■□□ 2.2
ACAA1-206ENST00000423611 TOPAZ1Q8N9V7 1692 aa28.79■■■□□ 2.2
ACAA1-206ENST00000423611 PHF8Q9UPP1 1060 aa28.78■■■□□ 2.2
ACAA1-206ENST00000423611 ILDR2Q71H61 639 aa28.77■■■□□ 2.2
ACAA1-206ENST00000423611 CENPJQ9HC77 1338 aaPredicted RBP28.76■■■□□ 2.19
ACAA1-206ENST00000423611 RGS17Q9UGC6 210 aaPredicted RBP28.76■■■□□ 2.19
ACAA1-206ENST00000423611 TRPM3Q9HCF6 1732 aaPredicted RBP28.74■■■□□ 2.19
ACAA1-206ENST00000423611 PHF23Q9BUL5 403 aaPredicted RBP28.73■■■□□ 2.19
ACAA1-206ENST00000423611 CDK19Q9BWU1 502 aa28.7■■■□□ 2.18
ACAA1-206ENST00000423611 SPATA31A3Q5VYP0 1347 aa28.69■■■□□ 2.18
ACAA1-206ENST00000423611 XPCQ01831 940 aaPredicted RBP28.68■■■□□ 2.18
ACAA1-206ENST00000423611 KRT28Q7Z3Y7 464 aa28.68■■■□□ 2.18
ACAA1-206ENST00000423611 SBNO1A3KN83 1393 aa28.67■■■□□ 2.18
ACAA1-206ENST00000423611 MARF1Q9Y4F3 1742 aaKnown RBP28.67■■■□□ 2.18
ACAA1-206ENST00000423611 NUDT16Q96DE0 195 aaKnown RBP28.67■■■□□ 2.18
ACAA1-206ENST00000423611 TIMELESSQ9UNS1 1208 aa28.67■■■□□ 2.18
ACAA1-206ENST00000423611 ALS2Q96Q42 1657 aa28.67■■■□□ 2.18
ACAA1-206ENST00000423611 TNS3Q68CZ2 1445 aa28.66■■■□□ 2.18
ACAA1-206ENST00000423611 PMFBP1Q8TBY8 1022 aa28.65■■■□□ 2.18
ACAA1-206ENST00000423611 SBNO2Q9Y2G9 1366 aa28.64■■■□□ 2.18
ACAA1-206ENST00000423611 PSME1Q06323 249 aa28.63■■■□□ 2.17
ACAA1-206ENST00000423611 POLR3AO14802 1390 aaPredicted RBP28.62■■■□□ 2.17
ACAA1-206ENST00000423611 NUTM2BA6NNL0 878 aaPredicted RBP28.62■■■□□ 2.17
ACAA1-206ENST00000423611 NUTM2EB1AL46 878 aaPredicted RBP28.62■■■□□ 2.17
ACAA1-206ENST00000423611 NUTM2AQ8IVF1 878 aaPredicted RBP28.62■■■□□ 2.17
ACAA1-206ENST00000423611 ABCA3Q99758 1704 aa28.62■■■□□ 2.17
ACAA1-206ENST00000423611 CARD11Q9BXL7 1154 aa28.61■■■□□ 2.17
ACAA1-206ENST00000423611 CCDC61Q9Y6R9 512 aa28.61■■■□□ 2.17
ACAA1-206ENST00000423611 PLEKHG3A1L390 1219 aa28.59■■■□□ 2.17
ACAA1-206ENST00000423611 MEX3CQ5U5Q3 659 aaKnown RBP28.58■■■□□ 2.17
ACAA1-206ENST00000423611 POTEAQ6S8J7 498 aa28.58■■■□□ 2.17
ACAA1-206ENST00000423611 CRYBG1Q9Y4K1 1723 aa28.57■■■□□ 2.16
ACAA1-206ENST00000423611 ARHGEF10O15013 1369 aa28.56■■■□□ 2.16
ACAA1-206ENST00000423611 EVC2Q86UK5 1308 aa28.55■■■□□ 2.16
ACAA1-206ENST00000423611 PPIP5K1Q6PFW1 1433 aa28.54■■■□□ 2.16
ACAA1-206ENST00000423611 SRPK2P78362 688 aaKnown RBP28.54■■■□□ 2.16
ACAA1-206ENST00000423611 NGDNQ8NEJ9 315 aaKnown RBP28.54■■■□□ 2.16
ACAA1-206ENST00000423611 CABP2Q9NPB3 220 aa28.54■■■□□ 2.16
ACAA1-206ENST00000423611 ACEP12821 1306 aa28.52■■■□□ 2.16
ACAA1-206ENST00000423611 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
ACAA1-206ENST00000423611 AFF2P51816 1311 aa28.51■■■□□ 2.15
ACAA1-206ENST00000423611 ADAMTS2O95450 1211 aa28.49■■■□□ 2.15
ACAA1-206ENST00000423611 CCER1Q8TC90 406 aaPredicted RBP28.49■■■□□ 2.15
ACAA1-206ENST00000423611 AKAP12Q02952 1782 aa28.49■■■□□ 2.15
ACAA1-206ENST00000423611 C8orf37Q96NL8 207 aa28.48■■■□□ 2.15
ACAA1-206ENST00000423611 FNBP4Q8N3X1 1017 aaPredicted RBP28.47■■■□□ 2.15
ACAA1-206ENST00000423611 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.46■■■□□ 2.15
ACAA1-206ENST00000423611 SOCS7O14512 581 aa28.45■■■□□ 2.14
ACAA1-206ENST00000423611 BRD4O60885 1362 aaPredicted RBP28.45■■■□□ 2.14
ACAA1-206ENST00000423611 TESK2Q96S53 571 aa28.44■■■□□ 2.14
ACAA1-206ENST00000423611 ATAD2Q6PL18 1390 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms