RNA–Protein interactions for RNA: ENST00000423611.5

ACAA1-206, Transcript of acetyl-CoA acyltransferase 1, human

TSL 3

Gene ACAA1, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACAA1-206	ENST00000423611	SIN3A	Q96ST3	1273 aa		29.15	■■■□□ 2.26
ACAA1-206	ENST00000423611	C1orf167	Q5SNV9	1468 aa		29.15	■■■□□ 2.26
ACAA1-206	ENST00000423611	FMN2	Q9NZ56	1722 aa		29.13	■■■□□ 2.25
ACAA1-206	ENST00000423611	MED1	Q15648	1581 aa	Predicted RBP	29.13	■■■□□ 2.25
ACAA1-206	ENST00000423611	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.11	■■■□□ 2.25
ACAA1-206	ENST00000423611	ADGRB2	O60241	1585 aa		29.09	■■■□□ 2.25
ACAA1-206	ENST00000423611	L3MBTL2	Q969R5	705 aa		29.09	■■■□□ 2.25
ACAA1-206	ENST00000423611	SHPRH	Q149N8	1683 aa		29.05	■■■□□ 2.24
ACAA1-206	ENST00000423611	PRAM1	Q96QH2	718 aa		29.04	■■■□□ 2.24
ACAA1-206	ENST00000423611	TRPM1	Q7Z4N2	1603 aa		29.04	■■■□□ 2.24
ACAA1-206	ENST00000423611	JCAD	Q9P266	1359 aa		29.01	■■■□□ 2.23
ACAA1-206	ENST00000423611	NEUROD1	Q13562	356 aa		29	■■■□□ 2.23
ACAA1-206	ENST00000423611	TRAK1	Q9UPV9	953 aa		29	■■■□□ 2.23
ACAA1-206	ENST00000423611	DISP3	Q9P2K9	1392 aa		29	■■■□□ 2.23
ACAA1-206	ENST00000423611	RGPD8	O14715	1765 aa	Predicted RBP	28.99	■■■□□ 2.23
ACAA1-206	ENST00000423611	ORAI2	Q96SN7	254 aa		28.98	■■■□□ 2.23
ACAA1-206	ENST00000423611	USP32	Q8NFA0	1604 aa		28.97	■■■□□ 2.23
ACAA1-206	ENST00000423611	NBPF1	Q3BBV0	1214 aa		28.96	■■■□□ 2.23
ACAA1-206	ENST00000423611	KIF1A	Q12756	1690 aa		28.96	■■■□□ 2.23
ACAA1-206	ENST00000423611	POGK	Q9P215	609 aa		28.95	■■■□□ 2.22
ACAA1-206	ENST00000423611	SOS2	Q07890	1332 aa	Predicted RBP	28.93	■■■□□ 2.22
ACAA1-206	ENST00000423611	SAFB2	Q14151	953 aa	Known RBP eCLIP	28.91	■■■□□ 2.22
ACAA1-206	ENST00000423611	ANKAR	Q7Z5J8	1434 aa		28.91	■■■□□ 2.22
ACAA1-206	ENST00000423611	DDX17	Q92841	729 aa	Known RBP	28.9	■■■□□ 2.22
ACAA1-206	ENST00000423611	PXDN	Q92626	1479 aa		28.9	■■■□□ 2.22
ACAA1-206	ENST00000423611	ESCO1	Q5FWF5	840 aa		28.89	■■■□□ 2.22
ACAA1-206	ENST00000423611	SPATA31A6	Q5VVP1	1343 aa		28.89	■■■□□ 2.21
ACAA1-206	ENST00000423611	PCGF6	Q9BYE7	350 aa		28.88	■■■□□ 2.21
ACAA1-206	ENST00000423611	TULP4	Q9NRJ4	1543 aa		28.88	■■■□□ 2.21
ACAA1-206	ENST00000423611	LRRC59	Q96AG4	307 aa	Known RBP	28.87	■■■□□ 2.21
ACAA1-206	ENST00000423611	NPHP3	Q7Z494	1330 aa		28.86	■■■□□ 2.21
ACAA1-206	ENST00000423611	LRP6	O75581	1613 aa		28.86	■■■□□ 2.21
ACAA1-206	ENST00000423611	GPRASP1	Q5JY77	1395 aa		28.86	■■■□□ 2.21
ACAA1-206	ENST00000423611	TONSL	Q96HA7	1378 aa		28.86	■■■□□ 2.21
ACAA1-206	ENST00000423611	NUTM2F	A1L443	756 aa		28.85	■■■□□ 2.21
ACAA1-206	ENST00000423611	NBPF8	Q3BBV2	869 aa		28.85	■■■□□ 2.21
ACAA1-206	ENST00000423611	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.84	■■■□□ 2.21
ACAA1-206	ENST00000423611	MINK1	Q8N4C8	1332 aa	Predicted RBP	28.84	■■■□□ 2.21
ACAA1-206	ENST00000423611	EIF3A	Q14152	1382 aa	Known RBP	28.84	■■■□□ 2.21
ACAA1-206	ENST00000423611	PNPLA6	Q8IY17	1366 aa		28.84	■■■□□ 2.21
ACAA1-206	ENST00000423611	QRICH2	Q9H0J4	1663 aa		28.83	■■■□□ 2.21
ACAA1-206	ENST00000423611	WASL	O00401	505 aa	Predicted RBP	28.83	■■■□□ 2.21
ACAA1-206	ENST00000423611	HIRIP3	Q9BW71	556 aa	Predicted RBP	28.82	■■■□□ 2.2
ACAA1-206	ENST00000423611	CLSPN	Q9HAW4	1339 aa		28.82	■■■□□ 2.2
ACAA1-206	ENST00000423611	ITSN1	Q15811	1721 aa		28.82	■■■□□ 2.2
ACAA1-206	ENST00000423611	ATP7B	P35670	1465 aa		28.79	■■■□□ 2.2
ACAA1-206	ENST00000423611	RALGAPB	Q86X10	1494 aa		28.79	■■■□□ 2.2
ACAA1-206	ENST00000423611	ROCK2	O75116	1388 aa	Known RBP	28.79	■■■□□ 2.2
ACAA1-206	ENST00000423611	PRR36	Q9H6K5	1346 aa		28.79	■■■□□ 2.2
ACAA1-206	ENST00000423611	FOXO3	O43524	673 aa		28.79	■■■□□ 2.2
ACAA1-206	ENST00000423611	TOPAZ1	Q8N9V7	1692 aa		28.79	■■■□□ 2.2
ACAA1-206	ENST00000423611	PHF8	Q9UPP1	1060 aa		28.78	■■■□□ 2.2
ACAA1-206	ENST00000423611	ILDR2	Q71H61	639 aa		28.77	■■■□□ 2.2
ACAA1-206	ENST00000423611	CENPJ	Q9HC77	1338 aa	Predicted RBP	28.76	■■■□□ 2.19
ACAA1-206	ENST00000423611	RGS17	Q9UGC6	210 aa	Predicted RBP	28.76	■■■□□ 2.19
ACAA1-206	ENST00000423611	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.74	■■■□□ 2.19
ACAA1-206	ENST00000423611	PHF23	Q9BUL5	403 aa	Predicted RBP	28.73	■■■□□ 2.19
ACAA1-206	ENST00000423611	CDK19	Q9BWU1	502 aa		28.7	■■■□□ 2.18
ACAA1-206	ENST00000423611	SPATA31A3	Q5VYP0	1347 aa		28.69	■■■□□ 2.18
ACAA1-206	ENST00000423611	XPC	Q01831	940 aa	Predicted RBP	28.68	■■■□□ 2.18
ACAA1-206	ENST00000423611	KRT28	Q7Z3Y7	464 aa		28.68	■■■□□ 2.18
ACAA1-206	ENST00000423611	SBNO1	A3KN83	1393 aa		28.67	■■■□□ 2.18
ACAA1-206	ENST00000423611	MARF1	Q9Y4F3	1742 aa	Known RBP	28.67	■■■□□ 2.18
ACAA1-206	ENST00000423611	NUDT16	Q96DE0	195 aa	Known RBP	28.67	■■■□□ 2.18
ACAA1-206	ENST00000423611	TIMELESS	Q9UNS1	1208 aa		28.67	■■■□□ 2.18
ACAA1-206	ENST00000423611	ALS2	Q96Q42	1657 aa		28.67	■■■□□ 2.18
ACAA1-206	ENST00000423611	TNS3	Q68CZ2	1445 aa		28.66	■■■□□ 2.18
ACAA1-206	ENST00000423611	PMFBP1	Q8TBY8	1022 aa		28.65	■■■□□ 2.18
ACAA1-206	ENST00000423611	SBNO2	Q9Y2G9	1366 aa		28.64	■■■□□ 2.18
ACAA1-206	ENST00000423611	PSME1	Q06323	249 aa		28.63	■■■□□ 2.17
ACAA1-206	ENST00000423611	POLR3A	O14802	1390 aa	Predicted RBP	28.62	■■■□□ 2.17
ACAA1-206	ENST00000423611	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.62	■■■□□ 2.17
ACAA1-206	ENST00000423611	NUTM2E	B1AL46	878 aa	Predicted RBP	28.62	■■■□□ 2.17
ACAA1-206	ENST00000423611	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.62	■■■□□ 2.17
ACAA1-206	ENST00000423611	ABCA3	Q99758	1704 aa		28.62	■■■□□ 2.17
ACAA1-206	ENST00000423611	CARD11	Q9BXL7	1154 aa		28.61	■■■□□ 2.17
ACAA1-206	ENST00000423611	CCDC61	Q9Y6R9	512 aa		28.61	■■■□□ 2.17
ACAA1-206	ENST00000423611	PLEKHG3	A1L390	1219 aa		28.59	■■■□□ 2.17
ACAA1-206	ENST00000423611	MEX3C	Q5U5Q3	659 aa	Known RBP	28.58	■■■□□ 2.17
ACAA1-206	ENST00000423611	POTEA	Q6S8J7	498 aa		28.58	■■■□□ 2.17
ACAA1-206	ENST00000423611	CRYBG1	Q9Y4K1	1723 aa		28.57	■■■□□ 2.16
ACAA1-206	ENST00000423611	ARHGEF10	O15013	1369 aa		28.56	■■■□□ 2.16
ACAA1-206	ENST00000423611	EVC2	Q86UK5	1308 aa		28.55	■■■□□ 2.16
ACAA1-206	ENST00000423611	PPIP5K1	Q6PFW1	1433 aa		28.54	■■■□□ 2.16
ACAA1-206	ENST00000423611	SRPK2	P78362	688 aa	Known RBP	28.54	■■■□□ 2.16
ACAA1-206	ENST00000423611	NGDN	Q8NEJ9	315 aa	Known RBP	28.54	■■■□□ 2.16
ACAA1-206	ENST00000423611	CABP2	Q9NPB3	220 aa		28.54	■■■□□ 2.16
ACAA1-206	ENST00000423611	ACE	P12821	1306 aa		28.52	■■■□□ 2.16
ACAA1-206	ENST00000423611	ZNF772	Q68DY9	489 aa	Predicted RBP	28.52	■■■□□ 2.16
ACAA1-206	ENST00000423611	AFF2	P51816	1311 aa		28.51	■■■□□ 2.15
ACAA1-206	ENST00000423611	ADAMTS2	O95450	1211 aa		28.49	■■■□□ 2.15
ACAA1-206	ENST00000423611	CCER1	Q8TC90	406 aa	Predicted RBP	28.49	■■■□□ 2.15
ACAA1-206	ENST00000423611	AKAP12	Q02952	1782 aa		28.49	■■■□□ 2.15
ACAA1-206	ENST00000423611	C8orf37	Q96NL8	207 aa		28.48	■■■□□ 2.15
ACAA1-206	ENST00000423611	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.47	■■■□□ 2.15
ACAA1-206	ENST00000423611	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.46	■■■□□ 2.15
ACAA1-206	ENST00000423611	SOCS7	O14512	581 aa		28.45	■■■□□ 2.14
ACAA1-206	ENST00000423611	BRD4	O60885	1362 aa	Predicted RBP	28.45	■■■□□ 2.14
ACAA1-206	ENST00000423611	TESK2	Q96S53	571 aa		28.44	■■■□□ 2.14
ACAA1-206	ENST00000423611	ATAD2	Q6PL18	1390 aa		28.44	■■■□□ 2.14

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