RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 C11orf95C9JLR9 678 aaPredicted RBP22.21■■□□□ 1.15
ABCA1-203ENST00000423487 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
ABCA1-203ENST00000423487 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
ABCA1-203ENST00000423487 PROSER2Q86WR7 435 aaPredicted RBP22.2■■□□□ 1.14
ABCA1-203ENST00000423487 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
ABCA1-203ENST00000423487 WASHC2AQ641Q2 1341 aa22.2■■□□□ 1.14
ABCA1-203ENST00000423487 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
ABCA1-203ENST00000423487 ZNF335Q9H4Z2 1342 aaPredicted RBP22.18■■□□□ 1.14
ABCA1-203ENST00000423487 PUS7Q96PZ0 661 aaKnown RBP22.16■■□□□ 1.14
ABCA1-203ENST00000423487 POLR3GLQ9BT43 218 aa22.16■■□□□ 1.14
ABCA1-203ENST00000423487 TULP4Q9NRJ4 1543 aa22.15■■□□□ 1.14
ABCA1-203ENST00000423487 WASLO00401 505 aaPredicted RBP22.14■■□□□ 1.13
ABCA1-203ENST00000423487 STRCP1A6NGW2 1772 aa22.14■■□□□ 1.13
ABCA1-203ENST00000423487 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.14■■□□□ 1.13
ABCA1-203ENST00000423487 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.13
ABCA1-203ENST00000423487 ADGRB2O60241 1585 aa22.13■■□□□ 1.13
ABCA1-203ENST00000423487 SRPK2P78362 688 aaKnown RBP22.13■■□□□ 1.13
ABCA1-203ENST00000423487 CDK19Q9BWU1 502 aa22.13■■□□□ 1.13
ABCA1-203ENST00000423487 C14orf37Q86TY3 774 aa22.12■■□□□ 1.13
ABCA1-203ENST00000423487 ADGRL3Q9HAR2 1447 aa22.12■■□□□ 1.13
ABCA1-203ENST00000423487 TMEM94Q12767 1356 aa22.12■■□□□ 1.13
ABCA1-203ENST00000423487 RBM33Q96EV2 1170 aaKnown RBP22.11■■□□□ 1.13
ABCA1-203ENST00000423487 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
ABCA1-203ENST00000423487 ATAD2Q6PL18 1390 aa22.09■■□□□ 1.13
ABCA1-203ENST00000423487 LRRC7Q96NW7 1537 aa22.07■■□□□ 1.12
ABCA1-203ENST00000423487 DDX10Q13206 875 aaKnown RBP22.07■■□□□ 1.12
ABCA1-203ENST00000423487 C19orf44Q9H6X5 657 aa22.07■■□□□ 1.12
ABCA1-203ENST00000423487 CDC42BPGQ6DT37 1551 aa22.06■■□□□ 1.12
ABCA1-203ENST00000423487 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
ABCA1-203ENST00000423487 NINLQ9Y2I6 1382 aa22.03■■□□□ 1.12
ABCA1-203ENST00000423487 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
ABCA1-203ENST00000423487 MSH6P52701 1360 aa22.03■■□□□ 1.12
ABCA1-203ENST00000423487 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
ABCA1-203ENST00000423487 DCCP43146 1447 aa22.02■■□□□ 1.11
ABCA1-203ENST00000423487 ANKARQ7Z5J8 1434 aa22.02■■□□□ 1.11
ABCA1-203ENST00000423487 CCDC61Q9Y6R9 512 aa22.01■■□□□ 1.11
ABCA1-203ENST00000423487 LTBP4Q8N2S1 1624 aa22.01■■□□□ 1.11
ABCA1-203ENST00000423487 ATF3P18847 181 aa22.01■■□□□ 1.11
ABCA1-203ENST00000423487 ATP7BP35670 1465 aa22■■□□□ 1.11
ABCA1-203ENST00000423487 NUTM2FA1L443 756 aa22■■□□□ 1.11
ABCA1-203ENST00000423487 PRR36Q9H6K5 1346 aa22■■□□□ 1.11
ABCA1-203ENST00000423487 CADPS2Q86UW7 1296 aa21.99■■□□□ 1.11
ABCA1-203ENST00000423487 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
ABCA1-203ENST00000423487 FMN2Q9NZ56 1722 aa21.98■■□□□ 1.11
ABCA1-203ENST00000423487 CABP1Q9NZU7 370 aa21.97■■□□□ 1.11
ABCA1-203ENST00000423487 PANK3Q9H999 370 aa21.96■■□□□ 1.11
ABCA1-203ENST00000423487 PPIP5K1Q6PFW1 1433 aa21.96■■□□□ 1.11
ABCA1-203ENST00000423487 MYOM1P52179 1685 aa21.96■■□□□ 1.11
ABCA1-203ENST00000423487 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
ABCA1-203ENST00000423487 DIEXFQ68CQ4 756 aaKnown RBP21.96■■□□□ 1.11
ABCA1-203ENST00000423487 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
ABCA1-203ENST00000423487 ANKRD36BQ8N2N9 1353 aa21.93■■□□□ 1.1
ABCA1-203ENST00000423487 PLEKHG3A1L390 1219 aa21.93■■□□□ 1.1
ABCA1-203ENST00000423487 HDGFL2Q7Z4V5 671 aaPredicted RBP21.93■■□□□ 1.1
ABCA1-203ENST00000423487 USP32Q8NFA0 1604 aa21.93■■□□□ 1.1
ABCA1-203ENST00000423487 TOPAZ1Q8N9V7 1692 aa21.91■■□□□ 1.1
ABCA1-203ENST00000423487 MST1RQ04912 1400 aa21.9■■□□□ 1.1
ABCA1-203ENST00000423487 ITSN1Q15811 1721 aa21.9■■□□□ 1.1
ABCA1-203ENST00000423487 C1orf167Q5SNV9 1468 aa21.9■■□□□ 1.1
ABCA1-203ENST00000423487 ESCO1Q5FWF5 840 aa21.9■■□□□ 1.1
ABCA1-203ENST00000423487 ZNF692Q9BU19 519 aaPredicted RBP21.89■■□□□ 1.09
ABCA1-203ENST00000423487 PHF8Q9UPP1 1060 aa21.89■■□□□ 1.09
ABCA1-203ENST00000423487 A0A1W2PP64 1363 aa21.89■■□□□ 1.09
ABCA1-203ENST00000423487 KNSTRNQ9Y448 316 aa21.88■■□□□ 1.09
ABCA1-203ENST00000423487 CD163L1Q9NR16 1453 aa21.88■■□□□ 1.09
ABCA1-203ENST00000423487 CPSF1Q10570 1443 aaKnown RBP21.87■■□□□ 1.09
ABCA1-203ENST00000423487 PER1O15534 1290 aaPredicted RBP21.87■■□□□ 1.09
ABCA1-203ENST00000423487 NGDNQ8NEJ9 315 aaKnown RBP21.87■■□□□ 1.09
ABCA1-203ENST00000423487 PMFBP1Q8TBY8 1022 aa21.87■■□□□ 1.09
ABCA1-203ENST00000423487 ACEP12821 1306 aa21.87■■□□□ 1.09
ABCA1-203ENST00000423487 ORAI2Q96SN7 254 aa21.85■■□□□ 1.09
ABCA1-203ENST00000423487 CARD14Q9BXL6 1004 aa21.85■■□□□ 1.09
ABCA1-203ENST00000423487 SLAIN2Q9P270 581 aa21.85■■□□□ 1.09
ABCA1-203ENST00000423487 POLR3AO14802 1390 aaPredicted RBP21.85■■□□□ 1.09
ABCA1-203ENST00000423487 RGPD8O14715 1765 aaPredicted RBP21.85■■□□□ 1.09
ABCA1-203ENST00000423487 KTN1Q86UP2 1357 aaKnown RBP21.85■■□□□ 1.09
ABCA1-203ENST00000423487 NSD3Q9BZ95 1437 aa21.84■■□□□ 1.09
ABCA1-203ENST00000423487 IQSEC2Q5JU85 1478 aa21.82■■□□□ 1.08
ABCA1-203ENST00000423487 EDC4Q6P2E9 1401 aaKnown RBP21.81■■□□□ 1.08
ABCA1-203ENST00000423487 CGNL1Q0VF96 1302 aa21.8■■□□□ 1.08
ABCA1-203ENST00000423487 USP6P35125 1406 aa21.8■■□□□ 1.08
ABCA1-203ENST00000423487 KIF1AQ12756 1690 aa21.8■■□□□ 1.08
ABCA1-203ENST00000423487 ANP32CO43423 234 aa21.79■■□□□ 1.08
ABCA1-203ENST00000423487 CERKQ8TCT0 537 aa21.79■■□□□ 1.08
ABCA1-203ENST00000423487 NPC1L1Q9UHC9 1359 aa21.78■■□□□ 1.08
ABCA1-203ENST00000423487 AKAP12Q02952 1782 aa21.78■■□□□ 1.08
ABCA1-203ENST00000423487 AMER1Q5JTC6 1135 aaPredicted RBP21.78■■□□□ 1.08
ABCA1-203ENST00000423487 BRD4O60885 1362 aaPredicted RBP21.78■■□□□ 1.08
ABCA1-203ENST00000423487 FOXO3O43524 673 aa21.77■■□□□ 1.08
ABCA1-203ENST00000423487 TOM1O60784 492 aa21.77■■□□□ 1.08
ABCA1-203ENST00000423487 PSME1Q06323 249 aa21.77■■□□□ 1.08
ABCA1-203ENST00000423487 BRINP3Q76B58 766 aa21.77■■□□□ 1.08
ABCA1-203ENST00000423487 MON2Q7Z3U7 1717 aa21.76■■□□□ 1.07
ABCA1-203ENST00000423487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.75■■□□□ 1.071e-6■■□□□ 12
ABCA1-203ENST00000423487 TTC21BQ7Z4L5 1316 aa21.75■■□□□ 1.07
ABCA1-203ENST00000423487 NSD2O96028 1365 aa21.75■■□□□ 1.07
ABCA1-203ENST00000423487 CC2D1BQ5T0F9 858 aaKnown RBP21.75■■□□□ 1.07
ABCA1-203ENST00000423487 NPHP3Q7Z494 1330 aa21.75■■□□□ 1.07
ABCA1-203ENST00000423487 SSH2Q76I76 1423 aa21.74■■□□□ 1.07
ABCA1-203ENST00000423487 TTC21AQ8NDW8 1320 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms