RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
TRAPPC10-203ENST00000422875 SASS6Q6UVJ0 657 aa21.26■□□□□ 0.99
TRAPPC10-203ENST00000422875 SLC12A5Q9H2X9 1139 aa21.26■□□□□ 0.99
TRAPPC10-203ENST00000422875 CCDC39Q9UFE4 941 aa21.25■□□□□ 0.99
TRAPPC10-203ENST00000422875 NOB1Q9ULX3 412 aaKnown RBP21.25■□□□□ 0.99
TRAPPC10-203ENST00000422875 MCM4P33991 863 aa21.25■□□□□ 0.99
TRAPPC10-203ENST00000422875 NEXNQ0ZGT2 675 aa21.25■□□□□ 0.99
TRAPPC10-203ENST00000422875 C20orf194Q5TEA3 1177 aa21.25■□□□□ 0.99
TRAPPC10-203ENST00000422875 CPLX1O14810 134 aa21.24■□□□□ 0.99
TRAPPC10-203ENST00000422875 C1orf141Q5JVX7 400 aa21.24■□□□□ 0.99
TRAPPC10-203ENST00000422875 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
TRAPPC10-203ENST00000422875 A0A0U1RQG5 324 aaPredicted RBP21.24■□□□□ 0.99
TRAPPC10-203ENST00000422875 RNF20Q5VTR2 975 aa21.24■□□□□ 0.99
TRAPPC10-203ENST00000422875 PRKAR2BP31323 418 aa21.23■□□□□ 0.99
TRAPPC10-203ENST00000422875 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
TRAPPC10-203ENST00000422875 G3BP1Q13283 466 aaKnown RBP eCLIP21.22■□□□□ 0.99
TRAPPC10-203ENST00000422875 NCBP3Q53F19 620 aaKnown RBP21.22■□□□□ 0.99
TRAPPC10-203ENST00000422875 CPLX2Q6PUV4 134 aaKnown RBP21.22■□□□□ 0.99
TRAPPC10-203ENST00000422875 MBD3O95983 291 aa21.21■□□□□ 0.99
TRAPPC10-203ENST00000422875 RABEP1Q15276 862 aa21.21■□□□□ 0.99
TRAPPC10-203ENST00000422875 FIBPO43427 364 aa21.2■□□□□ 0.99
TRAPPC10-203ENST00000422875 STAC3Q96MF2 364 aa21.2■□□□□ 0.99
TRAPPC10-203ENST00000422875 ESPNB1AK53 854 aa21.2■□□□□ 0.98
TRAPPC10-203ENST00000422875 TSR1Q2NL82 804 aaKnown RBP21.2■□□□□ 0.98
TRAPPC10-203ENST00000422875 CCDC173Q0VFZ6 552 aa21.2■□□□□ 0.98
TRAPPC10-203ENST00000422875 CCDC73Q6ZRK6 1079 aa21.2■□□□□ 0.98
TRAPPC10-203ENST00000422875 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
TRAPPC10-203ENST00000422875 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
TRAPPC10-203ENST00000422875 APPP05067 770 aa21.19■□□□□ 0.98
TRAPPC10-203ENST00000422875 TPM2P07951 284 aa21.18■□□□□ 0.98
TRAPPC10-203ENST00000422875 CHMP4CQ96CF2 233 aa21.18■□□□□ 0.98
TRAPPC10-203ENST00000422875 UBTFL1P0CB47 393 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC10-203ENST00000422875 AKAP17AQ02040 695 aaKnown RBP21.18■□□□□ 0.98
TRAPPC10-203ENST00000422875 SURF6O75683 361 aaKnown RBP21.18■□□□□ 0.98
TRAPPC10-203ENST00000422875 TWISTNBQ3B726 338 aaPredicted RBP21.18■□□□□ 0.98
TRAPPC10-203ENST00000422875 TPM1P09493 284 aa21.17■□□□□ 0.98
TRAPPC10-203ENST00000422875 TRIM5Q9C035 493 aa21.17■□□□□ 0.98
TRAPPC10-203ENST00000422875 MVPQ14764 893 aaKnown RBP21.17■□□□□ 0.98
TRAPPC10-203ENST00000422875 MAP7D2Q96T17 732 aa21.17■□□□□ 0.98
TRAPPC10-203ENST00000422875 GPS2Q13227 327 aa21.17■□□□□ 0.98
TRAPPC10-203ENST00000422875 ATF7IPQ6VMQ6 1270 aa21.17■□□□□ 0.98
TRAPPC10-203ENST00000422875 ERC2O15083 957 aa21.16■□□□□ 0.98
TRAPPC10-203ENST00000422875 KIAA1107Q9UPP5 1409 aa21.16■□□□□ 0.98
TRAPPC10-203ENST00000422875 K7ELQ4 463 aaPredicted RBP21.16■□□□□ 0.98
TRAPPC10-203ENST00000422875 TSPY26PQ9H489 355 aa21.16■□□□□ 0.98
TRAPPC10-203ENST00000422875 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
TRAPPC10-203ENST00000422875 GCC1Q96CN9 775 aa21.15■□□□□ 0.98
TRAPPC10-203ENST00000422875 SDF4Q9BRK5 362 aa21.15■□□□□ 0.98
TRAPPC10-203ENST00000422875 ERICH3Q5RHP9 1530 aa21.15■□□□□ 0.98
TRAPPC10-203ENST00000422875 SYNE3Q6ZMZ3 975 aa21.15■□□□□ 0.98
TRAPPC10-203ENST00000422875 TRIM29Q14134 588 aa21.15■□□□□ 0.98
TRAPPC10-203ENST00000422875 GTF2E1P29083 439 aaPredicted RBP21.14■□□□□ 0.98
TRAPPC10-203ENST00000422875 SPC24Q8NBT2 197 aa21.14■□□□□ 0.98
TRAPPC10-203ENST00000422875 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.14■□□□□ 0.98
TRAPPC10-203ENST00000422875 HSP90AB4PQ58FF6 505 aa21.14■□□□□ 0.97
TRAPPC10-203ENST00000422875 AIMP1Q12904 312 aaKnown RBP21.14■□□□□ 0.97
TRAPPC10-203ENST00000422875 MNS1Q8NEH6 495 aa21.14■□□□□ 0.97
TRAPPC10-203ENST00000422875 MARCH6O60337 910 aa21.13■□□□□ 0.97
TRAPPC10-203ENST00000422875 SLFN5Q08AF3 891 aa21.13■□□□□ 0.97
TRAPPC10-203ENST00000422875 MTERF4Q7Z6M4 381 aaKnown RBP21.12■□□□□ 0.97
TRAPPC10-203ENST00000422875 TTC5Q8N0Z6 440 aa21.12■□□□□ 0.97
TRAPPC10-203ENST00000422875 DDX58O95786 925 aaKnown RBP21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 TEX35Q5T0J7 233 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 NUTM2GQ5VZR2 741 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 CHD1LQ86WJ1 897 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 PKNOX2Q96KN3 472 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.972e-6■■■■□ 19.9
TRAPPC10-203ENST00000422875 CLASRPQ8N2M8 674 aaKnown RBP21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 TRDNQ13061 729 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 NEUROD6Q96NK8 337 aa21.11■□□□□ 0.97
TRAPPC10-203ENST00000422875 NAIPQ13075 1403 aa21.1■□□□□ 0.97
TRAPPC10-203ENST00000422875 GNAI3P08754 354 aa21.1■□□□□ 0.97
TRAPPC10-203ENST00000422875 WWC1Q8IX03 1113 aa21.1■□□□□ 0.97
TRAPPC10-203ENST00000422875 IPO7O95373 1038 aaKnown RBP21.09■□□□□ 0.97
TRAPPC10-203ENST00000422875 LRRFIP1Q32MZ4 808 aaKnown RBP21.09■□□□□ 0.97
TRAPPC10-203ENST00000422875 WDR63Q8IWG1 891 aa21.09■□□□□ 0.97
TRAPPC10-203ENST00000422875 MCM2P49736 904 aa21.09■□□□□ 0.97
TRAPPC10-203ENST00000422875 CNTROBQ8N137 903 aa21.08■□□□□ 0.97
TRAPPC10-203ENST00000422875 PCMTD1Q96MG8 357 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC10-203ENST00000422875 FSD1Q9BTV5 496 aa21.08■□□□□ 0.96
TRAPPC10-203ENST00000422875 SLC4A2P04920 1241 aa21.07■□□□□ 0.96
TRAPPC10-203ENST00000422875 HMGN5P82970 282 aaKnown RBP21.07■□□□□ 0.96
TRAPPC10-203ENST00000422875 CEBPZQ03701 1054 aaKnown RBP21.07■□□□□ 0.96
TRAPPC10-203ENST00000422875 NFXL1Q6ZNB6 911 aa21.07■□□□□ 0.96
TRAPPC10-203ENST00000422875 ARGLU1Q9NWB6 273 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC10-203ENST00000422875 VPS53Q5VIR6 699 aa21.06■□□□□ 0.96
TRAPPC10-203ENST00000422875 KDM4AO75164 1064 aa21.06■□□□□ 0.96
TRAPPC10-203ENST00000422875 CWC22Q9HCG8 908 aaKnown RBP21.05■□□□□ 0.96
TRAPPC10-203ENST00000422875 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
TRAPPC10-203ENST00000422875 PRKCSHP14314 528 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC10-203ENST00000422875 RIC3Q7Z5B4 369 aa21.05■□□□□ 0.96
TRAPPC10-203ENST00000422875 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 TMEM57Q8N5G2 664 aa21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 ZNF428Q96B54 188 aa21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 CIZ1Q9ULV3 898 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 WASHC4Q2M389 1173 aa21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 CCDC70Q6NSX1 233 aa21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 RALYLQ86SE5 291 aaKnown RBP21.04■□□□□ 0.96
TRAPPC10-203ENST00000422875 PDILTQ8N807 584 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms