RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TONSLQ96HA7 1378 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 ABCC11Q96J66 1382 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 ADGRB1O14514 1584 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 CDC42BPGQ6DT37 1551 aa13.91□□□□□ -0.18
HERC3-204ENST00000422770 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
HERC3-204ENST00000422770 MST1RQ04912 1400 aa13.9□□□□□ -0.19
HERC3-204ENST00000422770 RGPD8O14715 1765 aaPredicted RBP13.89□□□□□ -0.19
HERC3-204ENST00000422770 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
HERC3-204ENST00000422770 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
HERC3-204ENST00000422770 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
HERC3-204ENST00000422770 TRPM1Q7Z4N2 1603 aa13.89□□□□□ -0.19
HERC3-204ENST00000422770 DLC1Q96QB1 1528 aa13.88□□□□□ -0.19
HERC3-204ENST00000422770 NHSL1Q5SYE7 1610 aa13.87□□□□□ -0.19
HERC3-204ENST00000422770 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
HERC3-204ENST00000422770 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
HERC3-204ENST00000422770 MINK1Q8N4C8 1332 aaPredicted RBP13.86□□□□□ -0.19
HERC3-204ENST00000422770 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
HERC3-204ENST00000422770 AHDC1Q5TGY3 1603 aaPredicted RBP13.86□□□□□ -0.19
HERC3-204ENST00000422770 MED1Q15648 1581 aaPredicted RBP13.85□□□□□ -0.19
HERC3-204ENST00000422770 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
HERC3-204ENST00000422770 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
HERC3-204ENST00000422770 ESCO1Q5FWF5 840 aa13.84□□□□□ -0.19
HERC3-204ENST00000422770 QRICH2Q9H0J4 1663 aa13.84□□□□□ -0.19
HERC3-204ENST00000422770 DDX17Q92841 729 aaKnown RBP13.83□□□□□ -0.2
HERC3-204ENST00000422770 ORAI2Q96SN7 254 aa13.83□□□□□ -0.2
HERC3-204ENST00000422770 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
HERC3-204ENST00000422770 KIF1AQ12756 1690 aa13.82□□□□□ -0.2
HERC3-204ENST00000422770 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
HERC3-204ENST00000422770 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
HERC3-204ENST00000422770 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
HERC3-204ENST00000422770 SHPRHQ149N8 1683 aa13.81□□□□□ -0.2
HERC3-204ENST00000422770 ITSN1Q15811 1721 aa13.81□□□□□ -0.2
HERC3-204ENST00000422770 JCADQ9P266 1359 aa13.79□□□□□ -0.2
HERC3-204ENST00000422770 USP32Q8NFA0 1604 aa13.79□□□□□ -0.2
HERC3-204ENST00000422770 XPCQ01831 940 aaPredicted RBP13.78□□□□□ -0.2
HERC3-204ENST00000422770 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.21
HERC3-204ENST00000422770 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.21
HERC3-204ENST00000422770 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.21
HERC3-204ENST00000422770 NBPF8Q3BBV2 869 aa13.77□□□□□ -0.21
HERC3-204ENST00000422770 NUTM2AQ8IVF1 878 aaPredicted RBP13.77□□□□□ -0.21
HERC3-204ENST00000422770 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.21
HERC3-204ENST00000422770 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
HERC3-204ENST00000422770 NPHP3Q7Z494 1330 aa13.76□□□□□ -0.21
HERC3-204ENST00000422770 FOXO3O43524 673 aa13.76□□□□□ -0.21
HERC3-204ENST00000422770 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
HERC3-204ENST00000422770 LRRC59Q96AG4 307 aaKnown RBP13.75□□□□□ -0.21
HERC3-204ENST00000422770 CARD11Q9BXL7 1154 aa13.75□□□□□ -0.21
HERC3-204ENST00000422770 RALGAPBQ86X10 1494 aa13.74□□□□□ -0.21
HERC3-204ENST00000422770 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
HERC3-204ENST00000422770 PMFBP1Q8TBY8 1022 aa13.74□□□□□ -0.21
HERC3-204ENST00000422770 PHF8Q9UPP1 1060 aa13.74□□□□□ -0.21
HERC3-204ENST00000422770 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
HERC3-204ENST00000422770 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
HERC3-204ENST00000422770 PLEKHG5O94827 1062 aa13.73□□□□□ -0.21
HERC3-204ENST00000422770 SRPK2P78362 688 aaKnown RBP13.73□□□□□ -0.21
HERC3-204ENST00000422770 LMOD2Q6P5Q4 547 aa13.72□□□□□ -0.21
HERC3-204ENST00000422770 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
HERC3-204ENST00000422770 PXDNQ92626 1479 aa13.72□□□□□ -0.21
HERC3-204ENST00000422770 TOPAZ1Q8N9V7 1692 aa13.72□□□□□ -0.21
HERC3-204ENST00000422770 SPATA31A6Q5VVP1 1343 aa13.71□□□□□ -0.21
HERC3-204ENST00000422770 PNPLA6Q8IY17 1366 aa13.71□□□□□ -0.22
HERC3-204ENST00000422770 SOS2Q07890 1332 aaPredicted RBP13.7□□□□□ -0.22
HERC3-204ENST00000422770 PRR36Q9H6K5 1346 aa13.7□□□□□ -0.22
HERC3-204ENST00000422770 ATP7BP35670 1465 aa13.7□□□□□ -0.22
HERC3-204ENST00000422770 PSME1Q06323 249 aa13.7□□□□□ -0.22
HERC3-204ENST00000422770 NGDNQ8NEJ9 315 aaKnown RBP13.7□□□□□ -0.22
HERC3-204ENST00000422770 LRP6O75581 1613 aa13.7□□□□□ -0.22
HERC3-204ENST00000422770 KRT28Q7Z3Y7 464 aa13.69□□□□□ -0.22
HERC3-204ENST00000422770 NUDT16Q96DE0 195 aaKnown RBP13.69□□□□□ -0.22
HERC3-204ENST00000422770 GPRASP1Q5JY77 1395 aa13.69□□□□□ -0.22
HERC3-204ENST00000422770 MARF1Q9Y4F3 1742 aaKnown RBP13.68□□□□□ -0.22
HERC3-204ENST00000422770 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
HERC3-204ENST00000422770 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
HERC3-204ENST00000422770 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
HERC3-204ENST00000422770 TRPM3Q9HCF6 1732 aaPredicted RBP13.67□□□□□ -0.22
HERC3-204ENST00000422770 EVC2Q86UK5 1308 aa13.67□□□□□ -0.22
HERC3-204ENST00000422770 PAK3O75914 559 aaPredicted RBP13.67□□□□□ -0.22
HERC3-204ENST00000422770 ADAMTS2O95450 1211 aa13.67□□□□□ -0.22
HERC3-204ENST00000422770 TNS3Q68CZ2 1445 aa13.66□□□□□ -0.22
HERC3-204ENST00000422770 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
HERC3-204ENST00000422770 ABCA3Q99758 1704 aa13.65□□□□□ -0.22
HERC3-204ENST00000422770 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
HERC3-204ENST00000422770 SPATA31A3Q5VYP0 1347 aa13.64□□□□□ -0.23
HERC3-204ENST00000422770 ALS2Q96Q42 1657 aa13.63□□□□□ -0.23
HERC3-204ENST00000422770 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
HERC3-204ENST00000422770 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
HERC3-204ENST00000422770 ACEP12821 1306 aa13.63□□□□□ -0.23
HERC3-204ENST00000422770 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
HERC3-204ENST00000422770 SBNO1A3KN83 1393 aa13.61□□□□□ -0.23
HERC3-204ENST00000422770 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
HERC3-204ENST00000422770 USP47Q96K76 1375 aa13.61□□□□□ -0.23
HERC3-204ENST00000422770 AKAP12Q02952 1782 aa13.61□□□□□ -0.23
HERC3-204ENST00000422770 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
HERC3-204ENST00000422770 AFF2P51816 1311 aa13.61□□□□□ -0.23
HERC3-204ENST00000422770 ST20-MTHFSA0A0A6YYL1 179 aa13.6□□□□□ -0.23
HERC3-204ENST00000422770 CABLES1Q8TDN4 633 aa13.6□□□□□ -0.23
HERC3-204ENST00000422770 RGS17Q9UGC6 210 aaPredicted RBP13.6□□□□□ -0.23
HERC3-204ENST00000422770 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
HERC3-204ENST00000422770 CABP1Q9NZU7 370 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 843.5 ms