RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
LINC01840-201ENST00000421870 CDC42BPGQ6DT37 1551 aa21.59■■□□□ 1.05
LINC01840-201ENST00000421870 ORAI2Q96SN7 254 aa21.58■■□□□ 1.05
LINC01840-201ENST00000421870 TRIM26Q12899 539 aaPredicted RBP21.57■■□□□ 1.04
LINC01840-201ENST00000421870 DLC1Q96QB1 1528 aa21.56■■□□□ 1.04
LINC01840-201ENST00000421870 LRRC59Q96AG4 307 aaKnown RBP21.55■■□□□ 1.04
LINC01840-201ENST00000421870 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
LINC01840-201ENST00000421870 SHPRHQ149N8 1683 aa21.55■■□□□ 1.04
LINC01840-201ENST00000421870 DDX17Q92841 729 aaKnown RBP21.54■■□□□ 1.04
LINC01840-201ENST00000421870 RGS17Q9UGC6 210 aaPredicted RBP21.54■■□□□ 1.04
LINC01840-201ENST00000421870 SPATA31A6Q5VVP1 1343 aa21.54■■□□□ 1.04
LINC01840-201ENST00000421870 PRAM1Q96QH2 718 aa21.53■■□□□ 1.04
LINC01840-201ENST00000421870 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
LINC01840-201ENST00000421870 FMN2Q9NZ56 1722 aa21.51■■□□□ 1.03
LINC01840-201ENST00000421870 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
LINC01840-201ENST00000421870 KIAA1210Q9ULL0 1709 aa21.5■■□□□ 1.03
LINC01840-201ENST00000421870 ESCO1Q5FWF5 840 aa21.5■■□□□ 1.03
LINC01840-201ENST00000421870 SIN3AQ96ST3 1273 aa21.5■■□□□ 1.03
LINC01840-201ENST00000421870 POGKQ9P215 609 aa21.49■■□□□ 1.03
LINC01840-201ENST00000421870 RGPD8O14715 1765 aaPredicted RBP21.47■■□□□ 1.03
LINC01840-201ENST00000421870 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
LINC01840-201ENST00000421870 L3MBTL2Q969R5 705 aa21.47■■□□□ 1.03
LINC01840-201ENST00000421870 SOCS7O14512 581 aa21.46■■□□□ 1.03
LINC01840-201ENST00000421870 SAFB2Q14151 953 aaKnown RBP eCLIP21.46■■□□□ 1.03
LINC01840-201ENST00000421870 LRP6O75581 1613 aa21.45■■□□□ 1.02
LINC01840-201ENST00000421870 NPHP3Q7Z494 1330 aa21.45■■□□□ 1.02
LINC01840-201ENST00000421870 FOXO3O43524 673 aa21.44■■□□□ 1.02
LINC01840-201ENST00000421870 PNPLA6Q8IY17 1366 aa21.44■■□□□ 1.02
LINC01840-201ENST00000421870 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
LINC01840-201ENST00000421870 ADGRB2O60241 1585 aa21.43■■□□□ 1.02
LINC01840-201ENST00000421870 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
LINC01840-201ENST00000421870 ARHGEF28Q8N1W1 1705 aaKnown RBP21.42■■□□□ 1.02
LINC01840-201ENST00000421870 PXDNQ92626 1479 aa21.41■■□□□ 1.02
LINC01840-201ENST00000421870 POTEAQ6S8J7 498 aa21.4■■□□□ 1.02
LINC01840-201ENST00000421870 KIF1AQ12756 1690 aa21.4■■□□□ 1.02
LINC01840-201ENST00000421870 NUTM2BA6NNL0 878 aaPredicted RBP21.39■■□□□ 1.01
LINC01840-201ENST00000421870 NUTM2EB1AL46 878 aaPredicted RBP21.39■■□□□ 1.01
LINC01840-201ENST00000421870 NUTM2AQ8IVF1 878 aaPredicted RBP21.39■■□□□ 1.01
LINC01840-201ENST00000421870 MINK1Q8N4C8 1332 aaPredicted RBP21.38■■□□□ 1.01
LINC01840-201ENST00000421870 USP32Q8NFA0 1604 aa21.38■■□□□ 1.01
LINC01840-201ENST00000421870 WASLO00401 505 aaPredicted RBP21.38■■□□□ 1.01
LINC01840-201ENST00000421870 HIRIP3Q9BW71 556 aaPredicted RBP21.38■■□□□ 1.01
LINC01840-201ENST00000421870 PHF8Q9UPP1 1060 aa21.38■■□□□ 1.01
LINC01840-201ENST00000421870 ANKARQ7Z5J8 1434 aa21.38■■□□□ 1.01
LINC01840-201ENST00000421870 MEX3CQ5U5Q3 659 aaKnown RBP21.37■■□□□ 1.01
LINC01840-201ENST00000421870 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
LINC01840-201ENST00000421870 XPCQ01831 940 aaPredicted RBP21.35■■□□□ 1.01
LINC01840-201ENST00000421870 KRT28Q7Z3Y7 464 aa21.35■■□□□ 1.01
LINC01840-201ENST00000421870 ZNF772Q68DY9 489 aaPredicted RBP21.33■■□□□ 1.01
LINC01840-201ENST00000421870 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1
LINC01840-201ENST00000421870 SPATA31A3Q5VYP0 1347 aa21.32■■□□□ 1
LINC01840-201ENST00000421870 PRR36Q9H6K5 1346 aa21.32■■□□□ 1
LINC01840-201ENST00000421870 TULP4Q9NRJ4 1543 aa21.32■■□□□ 1
LINC01840-201ENST00000421870 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
LINC01840-201ENST00000421870 PSME1Q06323 249 aa21.31■■□□□ 1
LINC01840-201ENST00000421870 PMFBP1Q8TBY8 1022 aa21.3■■□□□ 1
LINC01840-201ENST00000421870 CDK19Q9BWU1 502 aa21.29■■□□□ 1
LINC01840-201ENST00000421870 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
LINC01840-201ENST00000421870 AFF2P51816 1311 aa21.28■■□□□ 1
LINC01840-201ENST00000421870 SBNO1A3KN83 1393 aa21.27■■□□□ 1
LINC01840-201ENST00000421870 ADAMTS2O95450 1211 aa21.27■■□□□ 1
LINC01840-201ENST00000421870 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
LINC01840-201ENST00000421870 C8orf37Q96NL8 207 aa21.27■■□□□ 1
LINC01840-201ENST00000421870 CENPJQ9HC77 1338 aaPredicted RBP21.27■□□□□ 0.99
LINC01840-201ENST00000421870 NGLY1Q96IV0 654 aa21.25■□□□□ 0.99
LINC01840-201ENST00000421870 ITSN1Q15811 1721 aa21.24■□□□□ 0.99
LINC01840-201ENST00000421870 MARF1Q9Y4F3 1742 aaKnown RBP21.24■□□□□ 0.99
LINC01840-201ENST00000421870 FNBP4Q8N3X1 1017 aaPredicted RBP21.24■□□□□ 0.99
LINC01840-201ENST00000421870 ATP7BP35670 1465 aa21.24■□□□□ 0.99
LINC01840-201ENST00000421870 TNS3Q68CZ2 1445 aa21.23■□□□□ 0.99
LINC01840-201ENST00000421870 CCDC61Q9Y6R9 512 aa21.23■□□□□ 0.99
LINC01840-201ENST00000421870 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
LINC01840-201ENST00000421870 TONSLQ96HA7 1378 aa21.23■□□□□ 0.99
LINC01840-201ENST00000421870 TRPM3Q9HCF6 1732 aaPredicted RBP21.22■□□□□ 0.99
LINC01840-201ENST00000421870 GPRASP1Q5JY77 1395 aa21.22■□□□□ 0.99
LINC01840-201ENST00000421870 QRICH2Q9H0J4 1663 aa21.21■□□□□ 0.99
LINC01840-201ENST00000421870 PLEKHG3A1L390 1219 aa21.2■□□□□ 0.98
LINC01840-201ENST00000421870 RXRBP28702 533 aa21.2■□□□□ 0.98
LINC01840-201ENST00000421870 NGDNQ8NEJ9 315 aaKnown RBP21.2■□□□□ 0.98
LINC01840-201ENST00000421870 QTRT2Q9H974 415 aaKnown RBP21.2■□□□□ 0.98
LINC01840-201ENST00000421870 ARHGEF10O15013 1369 aa21.2■□□□□ 0.98
LINC01840-201ENST00000421870 TOPAZ1Q8N9V7 1692 aa21.18■□□□□ 0.98
LINC01840-201ENST00000421870 ALS2Q96Q42 1657 aa21.18■□□□□ 0.98
LINC01840-201ENST00000421870 USP21Q9UK80 565 aa21.17■□□□□ 0.98
LINC01840-201ENST00000421870 POLR3AO14802 1390 aaPredicted RBP21.17■□□□□ 0.98
LINC01840-201ENST00000421870 SRPK2P78362 688 aaKnown RBP21.16■□□□□ 0.98
LINC01840-201ENST00000421870 CABLES1Q8TDN4 633 aa21.16■□□□□ 0.98
LINC01840-201ENST00000421870 ACEP12821 1306 aa21.15■□□□□ 0.98
LINC01840-201ENST00000421870 RBM6P78332 1123 aaKnown RBP21.15■□□□□ 0.98
LINC01840-201ENST00000421870 LMOD2Q6P5Q4 547 aa21.15■□□□□ 0.98
LINC01840-201ENST00000421870 CABP2Q9NPB3 220 aa21.15■□□□□ 0.98
LINC01840-201ENST00000421870 CDK12Q9NYV4 1490 aaPredicted RBP21.14■□□□□ 0.98
LINC01840-201ENST00000421870 PCGF6Q9BYE7 350 aa21.14■□□□□ 0.97
LINC01840-201ENST00000421870 BCL9LQ86UU0 1499 aa21.13■□□□□ 0.97
LINC01840-201ENST00000421870 RALGAPBQ86X10 1494 aa21.13■□□□□ 0.97
LINC01840-201ENST00000421870 EVC2Q86UK5 1308 aa21.13■□□□□ 0.97
LINC01840-201ENST00000421870 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
LINC01840-201ENST00000421870 TRPC5Q9UL62 973 aaPredicted RBP21.13■□□□□ 0.97
LINC01840-201ENST00000421870 ABCA3Q99758 1704 aa21.12■□□□□ 0.97
LINC01840-201ENST00000421870 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms